RNA–Protein interactions for RNA: ENST00000620267.1

PKD1L3-201, Transcript of polycystin 1 like 3, transient receptor potential channel interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD1L3, Length 5,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1L3-201ENST00000620267 ARID4BQ4LE39 1312 aaPredicted RBP13.54□□□□□ -0.24
PKD1L3-201ENST00000620267 WDR43Q15061 677 aaKnown RBP eCLIP13.53□□□□□ -0.24
PKD1L3-201ENST00000620267 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.53□□□□□ -0.24
PKD1L3-201ENST00000620267 RRP7BPQ9NSQ0 103 aa13.53□□□□□ -0.24
PKD1L3-201ENST00000620267 KDM2AQ9Y2K7 1162 aa13.53□□□□□ -0.24
PKD1L3-201ENST00000620267 EIF4G2P78344 907 aaKnown RBP eCLIP13.52□□□□□ -0.24
PKD1L3-201ENST00000620267 TMC1Q8TDI8 760 aa13.52□□□□□ -0.24
PKD1L3-201ENST00000620267 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.25
PKD1L3-201ENST00000620267 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
PKD1L3-201ENST00000620267 KANK1Q14678 1352 aa13.48□□□□□ -0.25
PKD1L3-201ENST00000620267 MROH2BQ7Z745 1585 aa13.48□□□□□ -0.25
PKD1L3-201ENST00000620267 CCDC88BA6NC98 1476 aa13.47□□□□□ -0.25
PKD1L3-201ENST00000620267 C14orf37Q86TY3 774 aa13.47□□□□□ -0.25
PKD1L3-201ENST00000620267 HDGFP51858 240 aaKnown RBP13.47□□□□□ -0.25
PKD1L3-201ENST00000620267 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.25
PKD1L3-201ENST00000620267 SOGA1O94964 1423 aa13.46□□□□□ -0.26
PKD1L3-201ENST00000620267 DDX10Q13206 875 aaKnown RBP13.46□□□□□ -0.26
PKD1L3-201ENST00000620267 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
PKD1L3-201ENST00000620267 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
PKD1L3-201ENST00000620267 HNRNPUQ00839 825 aaKnown RBP eCLIP13.43□□□□□ -0.26
PKD1L3-201ENST00000620267 CFAP53Q96M91 514 aa13.42□□□□□ -0.26
PKD1L3-201ENST00000620267 UPF2Q9HAU5 1272 aaKnown RBP13.42□□□□□ -0.26
PKD1L3-201ENST00000620267 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
PKD1L3-201ENST00000620267 ANP32AP39687 249 aaKnown RBP13.41□□□□□ -0.26
PKD1L3-201ENST00000620267 GTF3C3Q9Y5Q9 886 aa13.41□□□□□ -0.26
PKD1L3-201ENST00000620267 FAM9BQ8IZU0 186 aa13.41□□□□□ -0.26
PKD1L3-201ENST00000620267 ABCC8Q09428 1581 aa13.4□□□□□ -0.26
PKD1L3-201ENST00000620267 FMN1Q68DA7 1419 aa13.4□□□□□ -0.26
PKD1L3-201ENST00000620267 MRS2Q9HD23 443 aa13.4□□□□□ -0.27
PKD1L3-201ENST00000620267 BCL11AQ9H165 835 aa13.39□□□□□ -0.27
PKD1L3-201ENST00000620267 RGL3Q3MIN7 710 aa13.37□□□□□ -0.27
PKD1L3-201ENST00000620267 HAP1P54257 671 aaPredicted RBP13.36□□□□□ -0.27
PKD1L3-201ENST00000620267 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
PKD1L3-201ENST00000620267 ATAD2BQ9ULI0 1458 aa13.36□□□□□ -0.27
PKD1L3-201ENST00000620267 MYH16Q9H6N6 1097 aa13.35□□□□□ -0.27
PKD1L3-201ENST00000620267 KNSTRNQ9Y448 316 aa13.35□□□□□ -0.27
PKD1L3-201ENST00000620267 TIMELESSQ9UNS1 1208 aa13.34□□□□□ -0.27
PKD1L3-201ENST00000620267 CARD11Q9BXL7 1154 aa13.34□□□□□ -0.27
PKD1L3-201ENST00000620267 POGKQ9P215 609 aa13.33□□□□□ -0.27
PKD1L3-201ENST00000620267 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.28
PKD1L3-201ENST00000620267 EFCAB2Q5VUJ9 269 aa13.33□□□□□ -0.28
PKD1L3-201ENST00000620267 VPS8Q8N3P4 1428 aa13.32□□□□□ -0.28
PKD1L3-201ENST00000620267 TDRD9Q8NDG6 1382 aaKnown RBP13.31□□□□□ -0.28
PKD1L3-201ENST00000620267 SMARCA4P51532 1647 aa13.3□□□□□ -0.28
PKD1L3-201ENST00000620267 HSP90AA1P07900 732 aaKnown RBP13.3□□□□□ -0.28
PKD1L3-201ENST00000620267 NUDCQ9Y266 331 aa13.3□□□□□ -0.28
PKD1L3-201ENST00000620267 RSPH4AQ5TD94 716 aa13.29□□□□□ -0.28
PKD1L3-201ENST00000620267 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
PKD1L3-201ENST00000620267 ZBTB7CA1YPR0 619 aa13.27□□□□□ -0.28
PKD1L3-201ENST00000620267 PNNQ9H307 717 aaKnown RBP13.27□□□□□ -0.28
PKD1L3-201ENST00000620267 EIF5BO60841 1220 aaKnown RBP13.26□□□□□ -0.29
PKD1L3-201ENST00000620267 SALL2Q9Y467 1007 aaPredicted RBP13.26□□□□□ -0.29
PKD1L3-201ENST00000620267 CCDC136Q96JN2 1154 aa13.26□□□□□ -0.29
PKD1L3-201ENST00000620267 A0A0G2JS52 829 aa13.25□□□□□ -0.29
PKD1L3-201ENST00000620267 FKBP8Q14318 412 aa13.25□□□□□ -0.29
PKD1L3-201ENST00000620267 WIZO95785 1651 aa13.25□□□□□ -0.29
PKD1L3-201ENST00000620267 ANKRD30AQ9BXX3 1397 aa13.24□□□□□ -0.29
PKD1L3-201ENST00000620267 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
PKD1L3-201ENST00000620267 TMF1P82094 1093 aa13.23□□□□□ -0.29
PKD1L3-201ENST00000620267 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
PKD1L3-201ENST00000620267 ANP32BQ92688 251 aaKnown RBP13.22□□□□□ -0.29
PKD1L3-201ENST00000620267 CCDC18Q5T9S5 1454 aa13.22□□□□□ -0.29
PKD1L3-201ENST00000620267 CHMP4BQ9H444 224 aaKnown RBP13.21□□□□□ -0.29
PKD1L3-201ENST00000620267 SETD5Q9C0A6 1442 aa13.21□□□□□ -0.29
PKD1L3-201ENST00000620267 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
PKD1L3-201ENST00000620267 GGT6Q6P531 493 aa13.17□□□□□ -0.3
PKD1L3-201ENST00000620267 MLECQ14165 292 aa13.17□□□□□ -0.3
PKD1L3-201ENST00000620267 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
PKD1L3-201ENST00000620267 MS4A1P11836 297 aa13.16□□□□□ -0.3
PKD1L3-201ENST00000620267 LMOD2Q6P5Q4 547 aa13.15□□□□□ -0.3
PKD1L3-201ENST00000620267 PPM1GO15355 546 aaPredicted RBP13.15□□□□□ -0.3
PKD1L3-201ENST00000620267 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
PKD1L3-201ENST00000620267 HIRIP3Q9BW71 556 aaPredicted RBP13.13□□□□□ -0.31
PKD1L3-201ENST00000620267 NCAPD3P42695 1498 aa13.13□□□□□ -0.31
PKD1L3-201ENST00000620267 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
PKD1L3-201ENST00000620267 PKD2Q13563 968 aa13.12□□□□□ -0.31
PKD1L3-201ENST00000620267 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
PKD1L3-201ENST00000620267 EIF3AQ14152 1382 aaKnown RBP13.12□□□□□ -0.31
PKD1L3-201ENST00000620267 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
PKD1L3-201ENST00000620267 HDGFL2Q7Z4V5 671 aaPredicted RBP13.11□□□□□ -0.31
PKD1L3-201ENST00000620267 SRPK2P78362 688 aaKnown RBP13.11□□□□□ -0.31
PKD1L3-201ENST00000620267 NUP155O75694 1391 aa13.11□□□□□ -0.31
PKD1L3-201ENST00000620267 PTPRGP23470 1445 aa13.1□□□□□ -0.31
PKD1L3-201ENST00000620267 EID1Q9Y6B2 187 aa13.09□□□□□ -0.31
PKD1L3-201ENST00000620267 FTSJ3Q8IY81 847 aaKnown RBP13.09□□□□□ -0.31
PKD1L3-201ENST00000620267 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
PKD1L3-201ENST00000620267 CASC1Q6TDU7 716 aa13.08□□□□□ -0.32
PKD1L3-201ENST00000620267 MIER1Q8N108 512 aa13.08□□□□□ -0.32
PKD1L3-201ENST00000620267 FHOD3Q2V2M9 1422 aa13.08□□□□□ -0.32
PKD1L3-201ENST00000620267 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
PKD1L3-201ENST00000620267 KIF3BO15066 747 aa13.07□□□□□ -0.32
PKD1L3-201ENST00000620267 GAPVD1Q14C86 1478 aa13.06□□□□□ -0.32
PKD1L3-201ENST00000620267 MORC1Q86VD1 984 aa13.05□□□□□ -0.32
PKD1L3-201ENST00000620267 BECN1Q14457 450 aa13.05□□□□□ -0.32
PKD1L3-201ENST00000620267 MPHOSPH9Q99550 1183 aa13.05□□□□□ -0.32
PKD1L3-201ENST00000620267 U2SURPO15042 1029 aaKnown RBP13.04□□□□□ -0.32
PKD1L3-201ENST00000620267 WASHC2CQ9Y4E1 1318 aa13.04□□□□□ -0.32
PKD1L3-201ENST00000620267 ARXQ96QS3 562 aa13.04□□□□□ -0.32
PKD1L3-201ENST00000620267 UACAQ9BZF9 1416 aa13.03□□□□□ -0.32
PKD1L3-201ENST00000620267 KANK4Q5T7N3 995 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms