RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 FHAD1B1AJZ9 1412 aa29.08■■■□□ 2.25
PSPC1-206ENST00000619300 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
PSPC1-206ENST00000619300 KANK4Q5T7N3 995 aaPredicted RBP29.06■■■□□ 2.24
PSPC1-206ENST00000619300 THOC2Q8NI27 1593 aaKnown RBP29.06■■■□□ 2.24
PSPC1-206ENST00000619300 EFCAB5A4FU69 1503 aa29.06■■■□□ 2.24
PSPC1-206ENST00000619300 ZNF608Q9ULD9 1512 aaPredicted RBP29.06■■■□□ 2.24
PSPC1-206ENST00000619300 P3H3Q8IVL6 736 aa29.05■■■□□ 2.24
PSPC1-206ENST00000619300 ADAMTS12P58397 1594 aa28.98■■■□□ 2.23
PSPC1-206ENST00000619300 FHOD3Q2V2M9 1422 aa28.98■■■□□ 2.23
PSPC1-206ENST00000619300 MAP3K1Q13233 1512 aa28.96■■■□□ 2.23
PSPC1-206ENST00000619300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.93■■■□□ 2.22
PSPC1-206ENST00000619300 TIAM1Q13009 1591 aa28.88■■■□□ 2.21
PSPC1-206ENST00000619300 EIF4G3O43432 1585 aaKnown RBP28.87■■■□□ 2.21
PSPC1-206ENST00000619300 SAMD9Q5K651 1589 aa28.87■■■□□ 2.21
PSPC1-206ENST00000619300 CCER1Q8TC90 406 aaPredicted RBP28.87■■■□□ 2.21
PSPC1-206ENST00000619300 FMN1Q68DA7 1419 aa28.87■■■□□ 2.21
PSPC1-206ENST00000619300 CASKIN1Q8WXD9 1431 aa28.85■■■□□ 2.21
PSPC1-206ENST00000619300 HNRNPUL2Q1KMD3 747 aaKnown RBP28.85■■■□□ 2.21
PSPC1-206ENST00000619300 PCF11O94913 1555 aaKnown RBP28.85■■■□□ 2.21
PSPC1-206ENST00000619300 SNAPC4Q5SXM2 1469 aa28.84■■■□□ 2.21
PSPC1-206ENST00000619300 FYCO1Q9BQS8 1478 aa28.83■■■□□ 2.21
PSPC1-206ENST00000619300 ATP1B4Q9UN42 357 aaPredicted RBP28.81■■■□□ 2.2
PSPC1-206ENST00000619300 LRRC9Q6ZRR7 1453 aa28.79■■■□□ 2.2
PSPC1-206ENST00000619300 IQGAP2Q13576 1575 aa28.78■■■□□ 2.2
PSPC1-206ENST00000619300 RRBP1Q9P2E9 1410 aaKnown RBP28.78■■■□□ 2.2
PSPC1-206ENST00000619300 MAGI1Q96QZ7 1491 aaPredicted RBP28.76■■■□□ 2.2
PSPC1-206ENST00000619300 GRIN2AQ12879 1464 aa28.73■■■□□ 2.19
PSPC1-206ENST00000619300 CFAP43Q8NDM7 1665 aa28.72■■■□□ 2.19
PSPC1-206ENST00000619300 KIAA0586Q9BVV6 1533 aa28.7■■■□□ 2.18
PSPC1-206ENST00000619300 CHMP7Q8WUX9 453 aaPredicted RBP28.69■■■□□ 2.18
PSPC1-206ENST00000619300 CCNB3Q8WWL7 1395 aa28.68■■■□□ 2.18
PSPC1-206ENST00000619300 SYNJ2O15056 1496 aa28.67■■■□□ 2.18
PSPC1-206ENST00000619300 UGGT2Q9NYU1 1516 aa28.66■■■□□ 2.18
PSPC1-206ENST00000619300 PHLDB1Q86UU1 1377 aa28.58■■■□□ 2.17
PSPC1-206ENST00000619300 FBLN2P98095 1184 aa28.58■■■□□ 2.17
PSPC1-206ENST00000619300 DISP1Q96F81 1524 aa28.52■■■□□ 2.16
PSPC1-206ENST00000619300 CEP170Q5SW79 1584 aa28.51■■■□□ 2.15
PSPC1-206ENST00000619300 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
PSPC1-206ENST00000619300 NUP160Q12769 1436 aa28.5■■■□□ 2.15
PSPC1-206ENST00000619300 LRRIQ1Q96JM4 1722 aa28.48■■■□□ 2.15
PSPC1-206ENST00000619300 KIAA0556O60303 1618 aa28.47■■■□□ 2.15
PSPC1-206ENST00000619300 CCDC18Q5T9S5 1454 aa28.46■■■□□ 2.15
PSPC1-206ENST00000619300 HECW1Q76N89 1606 aa28.44■■■□□ 2.14
PSPC1-206ENST00000619300 ITGAEP38570 1179 aa28.43■■■□□ 2.14
PSPC1-206ENST00000619300 JPH4Q96JJ6 628 aa28.41■■■□□ 2.14
PSPC1-206ENST00000619300 FAM50AQ14320 339 aaKnown RBP28.4■■■□□ 2.14
PSPC1-206ENST00000619300 EPRSP07814 1512 aaKnown RBP28.39■■■□□ 2.14
PSPC1-206ENST00000619300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.38■■■□□ 2.13
PSPC1-206ENST00000619300 EHBP1L1Q8N3D4 1523 aa28.37■■■□□ 2.13
PSPC1-206ENST00000619300 NCOA2Q15596 1464 aa28.34■■■□□ 2.13
PSPC1-206ENST00000619300 CARMIL2Q6F5E8 1435 aa28.34■■■□□ 2.13
PSPC1-206ENST00000619300 FGD6Q6ZV73 1430 aa28.33■■■□□ 2.12
PSPC1-206ENST00000619300 MAGI3Q5TCQ9 1506 aa28.32■■■□□ 2.12
PSPC1-206ENST00000619300 SUPT6HQ7KZ85 1726 aaKnown RBP28.3■■■□□ 2.12
PSPC1-206ENST00000619300 CDK13Q14004 1512 aaKnown RBP28.28■■■□□ 2.12
PSPC1-206ENST00000619300 DHX57Q6P158 1386 aaKnown RBP28.28■■■□□ 2.12
PSPC1-206ENST00000619300 MYOM3Q5VTT5 1437 aa28.27■■■□□ 2.12
PSPC1-206ENST00000619300 CLSPNQ9HAW4 1339 aa28.26■■■□□ 2.12
PSPC1-206ENST00000619300 ARHGEF11O15085 1522 aa28.26■■■□□ 2.11
PSPC1-206ENST00000619300 NUP153P49790 1475 aaKnown RBP28.25■■■□□ 2.11
PSPC1-206ENST00000619300 ARID3CA6NKF2 412 aa28.25■■■□□ 2.11
PSPC1-206ENST00000619300 RAPGEF6Q8TEU7 1601 aa28.25■■■□□ 2.11
PSPC1-206ENST00000619300 SETD5Q9C0A6 1442 aa28.22■■■□□ 2.11
PSPC1-206ENST00000619300 RAB3GAP2Q9H2M9 1393 aa28.21■■■□□ 2.11
PSPC1-206ENST00000619300 CDK11AQ9UQ88 783 aaPredicted RBP28.18■■■□□ 2.1
PSPC1-206ENST00000619300 PLB1Q6P1J6 1458 aa28.17■■■□□ 2.1
PSPC1-206ENST00000619300 CHD1O14646 1710 aa28.15■■■□□ 2.1
PSPC1-206ENST00000619300 PRG4Q92954 1404 aaPredicted RBP28.13■■■□□ 2.09
PSPC1-206ENST00000619300 PTPN23Q9H3S7 1636 aa28.09■■■□□ 2.09
PSPC1-206ENST00000619300 MIA2Q96PC5 1412 aa28.08■■■□□ 2.09
PSPC1-206ENST00000619300 TCOF1Q13428 1488 aaKnown RBP28.07■■■□□ 2.08
PSPC1-206ENST00000619300 PTPRKQ15262 1439 aa28.06■■■□□ 2.08
PSPC1-206ENST00000619300 ABCA8O94911 1581 aa28.04■■■□□ 2.08
PSPC1-206ENST00000619300 PTPRGP23470 1445 aa28.03■■■□□ 2.08
PSPC1-206ENST00000619300 TROQ12816 1431 aaPredicted RBP28.03■■■□□ 2.08
PSPC1-206ENST00000619300 SHROOM2Q13796 1616 aa27.99■■■□□ 2.07
PSPC1-206ENST00000619300 HFM1A2PYH4 1435 aa27.98■■■□□ 2.07
PSPC1-206ENST00000619300 ATP10BO94823 1461 aa27.95■■■□□ 2.07
PSPC1-206ENST00000619300 PLEKHD1A6NEE1 506 aa27.93■■■□□ 2.06
PSPC1-206ENST00000619300 MAPKBP1O60336 1514 aa27.91■■■□□ 2.06
PSPC1-206ENST00000619300 NAIPQ13075 1403 aa27.9■■■□□ 2.06
PSPC1-206ENST00000619300 ZNF316A6NFI3 1004 aaPredicted RBP27.88■■■□□ 2.05
PSPC1-206ENST00000619300 ADCY10Q96PN6 1610 aa27.86■■■□□ 2.05
PSPC1-206ENST00000619300 CLASP1Q7Z460 1538 aa27.86■■■□□ 2.05
PSPC1-206ENST00000619300 UACAQ9BZF9 1416 aa27.85■■■□□ 2.05
PSPC1-206ENST00000619300 CHIC2Q9UKJ5 165 aa27.85■■■□□ 2.05
PSPC1-206ENST00000619300 GPATCH8Q9UKJ3 1502 aaKnown RBP27.83■■■□□ 2.05
PSPC1-206ENST00000619300 CFDP1Q9UEE9 299 aaPredicted RBP27.83■■■□□ 2.05
PSPC1-206ENST00000619300 ZNF644Q9H582 1327 aaPredicted RBP27.83■■■□□ 2.05
PSPC1-206ENST00000619300 KIF14Q15058 1648 aa27.82■■■□□ 2.04
PSPC1-206ENST00000619300 AKNAQ7Z591 1439 aa27.82■■■□□ 2.04
PSPC1-206ENST00000619300 RRP7BPQ9NSQ0 103 aa27.82■■■□□ 2.04
PSPC1-206ENST00000619300 ERCC6L2Q5T890 1561 aa27.81■■■□□ 2.04
PSPC1-206ENST00000619300 DAPK1P53355 1430 aa27.78■■■□□ 2.04
PSPC1-206ENST00000619300 ABCC5O15440 1437 aa27.77■■■□□ 2.04
PSPC1-206ENST00000619300 ITSN2Q9NZM3 1697 aa27.76■■■□□ 2.04
PSPC1-206ENST00000619300 ABCC10Q5T3U5 1492 aa27.75■■■□□ 2.03
PSPC1-206ENST00000619300 ROCK1Q13464 1354 aa27.74■■■□□ 2.03
PSPC1-206ENST00000619300 DIEXFQ68CQ4 756 aaKnown RBP27.74■■■□□ 2.03
PSPC1-206ENST00000619300 DNMT1P26358 1616 aaKnown RBP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms