RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.21□□□□□ -1.74
NEB-220ENST00000618972 RRP7BPQ9NSQ0 103 aa4.21□□□□□ -1.74
NEB-220ENST00000618972 ZBTB47Q9UFB7 747 aaPredicted RBP4.2□□□□□ -1.74
NEB-220ENST00000618972 HNRNPUQ00839 825 aaKnown RBP eCLIP4.2□□□□□ -1.74
NEB-220ENST00000618972 LAS1LQ9Y4W2 734 aaKnown RBP4.2□□□□□ -1.74
NEB-220ENST00000618972 ARID3AQ99856 593 aa4.19□□□□□ -1.74
NEB-220ENST00000618972 ANP32CO43423 234 aa4.17□□□□□ -1.74
NEB-220ENST00000618972 IL27Q8NEV9 243 aa4.17□□□□□ -1.74
NEB-220ENST00000618972 PLIN1O60240 522 aa4.17□□□□□ -1.74
NEB-220ENST00000618972 ANP32AP39687 249 aaKnown RBP4.15□□□□□ -1.74
NEB-220ENST00000618972 HSPA5P11021 654 aaKnown RBP4.15□□□□□ -1.75
NEB-220ENST00000618972 NCBP3Q53F19 620 aaKnown RBP4.15□□□□□ -1.75
NEB-220ENST00000618972 NEFMP07197 916 aa4.15□□□□□ -1.75
NEB-220ENST00000618972 DNAJC5BQ9UF47 199 aa4.14□□□□□ -1.75
NEB-220ENST00000618972 USP35Q9P2H5 1018 aa4.13□□□□□ -1.75
NEB-220ENST00000618972 UPF2Q9HAU5 1272 aaKnown RBP4.12□□□□□ -1.75
NEB-220ENST00000618972 SOGA1O94964 1423 aa4.12□□□□□ -1.75
NEB-220ENST00000618972 PPM1GO15355 546 aaPredicted RBP4.12□□□□□ -1.75
NEB-220ENST00000618972 PODXL2Q9NZ53 605 aa4.12□□□□□ -1.75
NEB-220ENST00000618972 CDCA7LQ96GN5 454 aa4.12□□□□□ -1.75
NEB-220ENST00000618972 L3MBTL2Q969R5 705 aa4.12□□□□□ -1.75
NEB-220ENST00000618972 PPP4R2Q9NY27 417 aa4.11□□□□□ -1.75
NEB-220ENST00000618972 BRPF3Q9ULD4 1205 aa4.11□□□□□ -1.75
NEB-220ENST00000618972 EXOC6Q8TAG9 804 aa4.11□□□□□ -1.75
NEB-220ENST00000618972 NBPF8Q3BBV2 869 aa4.11□□□□□ -1.75
NEB-220ENST00000618972 HOMEZQ8IX15 550 aa4.11□□□□□ -1.75
NEB-220ENST00000618972 RGL3Q3MIN7 710 aa4.1□□□□□ -1.75
NEB-220ENST00000618972 SPRYD3Q8NCJ5 442 aa4.1□□□□□ -1.75
NEB-220ENST00000618972 DCAF1Q9Y4B6 1507 aa4.1□□□□□ -1.75
NEB-220ENST00000618972 RSF1Q96T23 1441 aaPredicted RBP4.1□□□□□ -1.75
NEB-220ENST00000618972 PLEKHG5O94827 1062 aa4.1□□□□□ -1.75
NEB-220ENST00000618972 MRS2Q9HD23 443 aa4.1□□□□□ -1.75
NEB-220ENST00000618972 ZNF777Q9ULD5 760 aaPredicted RBP4.08□□□□□ -1.76
NEB-220ENST00000618972 DDRGK1Q96HY6 314 aa4.08□□□□□ -1.76
NEB-220ENST00000618972 RSPH6AQ9H0K4 717 aa4.08□□□□□ -1.76
NEB-220ENST00000618972 TIMELESSQ9UNS1 1208 aa4.08□□□□□ -1.76
NEB-220ENST00000618972 RUSC2Q8N2Y8 1516 aa4.07□□□□□ -1.76
NEB-220ENST00000618972 C20orf194Q5TEA3 1177 aa4.07□□□□□ -1.76
NEB-220ENST00000618972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.06□□□□□ -1.76
NEB-220ENST00000618972 TMC1Q8TDI8 760 aa4.06□□□□□ -1.76
NEB-220ENST00000618972 BECN1Q14457 450 aa4.06□□□□□ -1.76
NEB-220ENST00000618972 CC2D1BQ5T0F9 858 aaKnown RBP4.05□□□□□ -1.76
NEB-220ENST00000618972 HSP90AA1P07900 732 aaKnown RBP4.05□□□□□ -1.76
NEB-220ENST00000618972 FBXO3Q9UK99 471 aa4.05□□□□□ -1.76
NEB-220ENST00000618972 NOP58Q9Y2X3 529 aaKnown RBP4.05□□□□□ -1.76
NEB-220ENST00000618972 ZNF644Q9H582 1327 aaPredicted RBP4.05□□□□□ -1.76
NEB-220ENST00000618972 CALRP27797 417 aaKnown RBP4.05□□□□□ -1.76
NEB-220ENST00000618972 PDE4AP27815 886 aa4.04□□□□□ -1.76
NEB-220ENST00000618972 PLPPR3Q6T4P5 718 aa4.04□□□□□ -1.76
NEB-220ENST00000618972 CRBNQ96SW2 442 aa4.03□□□□□ -1.76
NEB-220ENST00000618972 MPHOSPH9Q99550 1183 aa4.03□□□□□ -1.76
NEB-220ENST00000618972 GZF1Q9H116 711 aaPredicted RBP4.03□□□□□ -1.76
NEB-220ENST00000618972 CEP162Q5TB80 1403 aa4.03□□□□□ -1.76
NEB-220ENST00000618972 CECR2Q9BXF3 1484 aa4.03□□□□□ -1.76
NEB-220ENST00000618972 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.03□□□□□ -1.76
NEB-220ENST00000618972 RGS3P49796 1198 aa4.02□□□□□ -1.77
NEB-220ENST00000618972 CFAP44Q96MT7 982 aa4.02□□□□□ -1.77
NEB-220ENST00000618972 TNNT3P45378 269 aaPredicted RBP4.02□□□□□ -1.77
NEB-220ENST00000618972 GOLGA6L3A6NEY3 463 aa4.02□□□□□ -1.77
NEB-220ENST00000618972 ZBTB7CA1YPR0 619 aa4.02□□□□□ -1.77
NEB-220ENST00000618972 MPNDQ8N594 471 aa4.02□□□□□ -1.77
NEB-220ENST00000618972 NEUROD2Q15784 382 aa4.02□□□□□ -1.77
NEB-220ENST00000618972 HAP1P54257 671 aaPredicted RBP4.02□□□□□ -1.77
NEB-220ENST00000618972 L1TD1Q5T7N2 865 aaKnown RBP4.02□□□□□ -1.77
NEB-220ENST00000618972 TCERG1O14776 1098 aaKnown RBP4.02□□□□□ -1.77
NEB-220ENST00000618972 NBPF1Q3BBV0 1214 aa4.02□□□□□ -1.77
NEB-220ENST00000618972 PNNQ9H307 717 aaKnown RBP4.02□□□□□ -1.77
NEB-220ENST00000618972 CCER2I3L3R5 266 aa4.01□□□□□ -1.77
NEB-220ENST00000618972 MTERF4Q7Z6M4 381 aaKnown RBP4.01□□□□□ -1.77
NEB-220ENST00000618972 GOLGA6L22H0YM25 854 aa4.01□□□□□ -1.77
NEB-220ENST00000618972 FBLN2P98095 1184 aa4.01□□□□□ -1.77
NEB-220ENST00000618972 FOXD4L1Q9NU39 408 aa4.01□□□□□ -1.77
NEB-220ENST00000618972 TPRNQ4KMQ1 711 aa4.01□□□□□ -1.77
NEB-220ENST00000618972 FRAT1Q92837 279 aaPredicted RBP4.01□□□□□ -1.77
NEB-220ENST00000618972 HMGB1P1B2RPK0 211 aaPredicted RBP4.01□□□□□ -1.77
NEB-220ENST00000618972 IPO9Q96P70 1041 aaKnown RBP4.01□□□□□ -1.77
NEB-220ENST00000618972 CCDC146Q8IYE0 955 aa4.01□□□□□ -1.77
NEB-220ENST00000618972 SEC24BO95487 1268 aa4.01□□□□□ -1.77
NEB-220ENST00000618972 SLC4A1APQ9BWU0 796 aaKnown RBP4□□□□□ -1.77
NEB-220ENST00000618972 WASHC2AQ641Q2 1341 aa4□□□□□ -1.77
NEB-220ENST00000618972 DHX57Q6P158 1386 aaKnown RBP4□□□□□ -1.77
NEB-220ENST00000618972 TULP1O00294 542 aaPredicted RBP4□□□□□ -1.77
NEB-220ENST00000618972 EIF4G2P78344 907 aaKnown RBP eCLIP4□□□□□ -1.77
NEB-220ENST00000618972 CHMP4BQ9H444 224 aaKnown RBP4□□□□□ -1.77
NEB-220ENST00000618972 TNNQ9UQP3 1299 aa4□□□□□ -1.77
NEB-220ENST00000618972 RRP7AQ9Y3A4 280 aaKnown RBP4□□□□□ -1.77
NEB-220ENST00000618972 IGHDP01880 384 aa4□□□□□ -1.77
NEB-220ENST00000618972 HSP90AA2PQ14568 343 aaPredicted RBP4□□□□□ -1.77
NEB-220ENST00000618972 DTNBO60941 627 aa4□□□□□ -1.77
NEB-220ENST00000618972 PNISRQ8TF01 805 aaKnown RBP4□□□□□ -1.77
NEB-220ENST00000618972 MAP7D2Q96T17 732 aa3.99□□□□□ -1.77
NEB-220ENST00000618972 A0A0U1RQG5 324 aaPredicted RBP3.99□□□□□ -1.77
NEB-220ENST00000618972 FRAT2O75474 233 aaPredicted RBP3.99□□□□□ -1.77
NEB-220ENST00000618972 TNIKQ9UKE5 1360 aa3.98□□□□□ -1.77
NEB-220ENST00000618972 CDK11BP21127 795 aaKnown RBP3.98□□□□□ -1.77
NEB-220ENST00000618972 RCAN3Q9UKA8 241 aa3.98□□□□□ -1.77
NEB-220ENST00000618972 DCAF11Q8TEB1 546 aa3.98□□□□□ -1.77
NEB-220ENST00000618972 PANK3Q9H999 370 aa3.98□□□□□ -1.77
NEB-220ENST00000618972 FBLN1P23142 703 aa3.98□□□□□ -1.77
NEB-220ENST00000618972 PRKRIP1Q9H875 184 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms