RNA–Protein interactions for RNA: ENST00000617219.1

CFHR3-206, Transcript of complement factor H related 3, humanhuman

TSL 5 BASIC

Gene CFHR3, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-206ENST00000617219 ASTLQ6HA08 431 aaPredicted RBP11.63□□□□□ -0.55
CFHR3-206ENST00000617219 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.56
CFHR3-206ENST00000617219 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.56
CFHR3-206ENST00000617219 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
CFHR3-206ENST00000617219 FKBP8Q14318 412 aa11.48□□□□□ -0.57
CFHR3-206ENST00000617219 TMEM121BQ9BXQ6 578 aaPredicted RBP11.44□□□□□ -0.58
CFHR3-206ENST00000617219 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
CFHR3-206ENST00000617219 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
CFHR3-206ENST00000617219 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
CFHR3-206ENST00000617219 POTEFA5A3E0 1075 aa11.37□□□□□ -0.59
CFHR3-206ENST00000617219 PAK3O75914 559 aaPredicted RBP11.29□□□□□ -0.6
CFHR3-206ENST00000617219 KRTAP3-3Q9BYR6 98 aa11.29□□□□□ -0.6
CFHR3-206ENST00000617219 KRTAP3-2Q9BYR7 98 aa11.29□□□□□ -0.6
CFHR3-206ENST00000617219 SLAIN1Q8ND83 568 aa11.25□□□□□ -0.61
CFHR3-206ENST00000617219 ATN1P54259 1190 aaPredicted RBP11.23□□□□□ -0.61
CFHR3-206ENST00000617219 MS4A3Q96HJ5 214 aa11.22□□□□□ -0.61
CFHR3-206ENST00000617219 MARVELD3Q96A59 401 aa11.21□□□□□ -0.61
CFHR3-206ENST00000617219 PABPN1Q86U42 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
CFHR3-206ENST00000617219 PROM2Q8N271 834 aa11.15□□□□□ -0.62
CFHR3-206ENST00000617219 RNF166Q96A37 237 aaPredicted RBP11.15□□□□□ -0.62
CFHR3-206ENST00000617219 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
CFHR3-206ENST00000617219 SNPHO15079 494 aa11.07□□□□□ -0.64
CFHR3-206ENST00000617219 COLQQ9Y215 455 aaPredicted RBP11.06□□□□□ -0.64
CFHR3-206ENST00000617219 SEC24BO95487 1268 aa11.04□□□□□ -0.64
CFHR3-206ENST00000617219 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
CFHR3-206ENST00000617219 EMP3P54852 163 aa11□□□□□ -0.65
CFHR3-206ENST00000617219 HS3ST6Q96QI5 342 aa11□□□□□ -0.65
CFHR3-206ENST00000617219 POTEB3A0JP26 581 aa10.99□□□□□ -0.65
CFHR3-206ENST00000617219 POTEBQ6S5H4 581 aa10.99□□□□□ -0.65
CFHR3-206ENST00000617219 CREBZFQ9NS37 354 aa10.99□□□□□ -0.65
CFHR3-206ENST00000617219 BMP2KQ9NSY1 1161 aaPredicted RBP10.93□□□□□ -0.66
CFHR3-206ENST00000617219 VASPP50552 380 aaPredicted RBP10.89□□□□□ -0.67
CFHR3-206ENST00000617219 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
CFHR3-206ENST00000617219 FAM205CA6NFA0 338 aa10.88□□□□□ -0.67
CFHR3-206ENST00000617219 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
CFHR3-206ENST00000617219 PLCD3Q8N3E9 789 aa10.82□□□□□ -0.68
CFHR3-206ENST00000617219 MIER1Q8N108 512 aa10.81□□□□□ -0.68
CFHR3-206ENST00000617219 TIE1P35590 1138 aa10.8□□□□□ -0.68
CFHR3-206ENST00000617219 IER5LQ5T953 404 aa10.8□□□□□ -0.68
CFHR3-206ENST00000617219 NPM1P06748 294 aaKnown RBP eCLIP10.77□□□□□ -0.69
CFHR3-206ENST00000617219 KLHL34Q8N239 644 aa10.74□□□□□ -0.69
CFHR3-206ENST00000617219 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
CFHR3-206ENST00000617219 IFNLR1Q8IU57 520 aaPredicted RBP10.71□□□□□ -0.69
CFHR3-206ENST00000617219 TRPC6Q9Y210 931 aa10.71□□□□□ -0.69
CFHR3-206ENST00000617219 PLA2G2EQ9NZK7 142 aa10.69□□□□□ -0.7
CFHR3-206ENST00000617219 AMER1Q5JTC6 1135 aaPredicted RBP10.68□□□□□ -0.7
CFHR3-206ENST00000617219 TTLL13PA6NNM8 815 aa10.65□□□□□ -0.7
CFHR3-206ENST00000617219 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
CFHR3-206ENST00000617219 PTGER2P43116 358 aa10.61□□□□□ -0.71
CFHR3-206ENST00000617219 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.61□□□□□ -0.71
CFHR3-206ENST00000617219 KIF12Q96FN5 646 aa10.61□□□□□ -0.71
CFHR3-206ENST00000617219 TRIM35Q9UPQ4 493 aa10.58□□□□□ -0.72
CFHR3-206ENST00000617219 IRX2Q9BZI1 471 aaPredicted RBP10.57□□□□□ -0.72
CFHR3-206ENST00000617219 RTN4Q9NQC3 1192 aaKnown RBP10.56□□□□□ -0.72
CFHR3-206ENST00000617219 MNX1P50219 401 aaPredicted RBP10.55□□□□□ -0.72
CFHR3-206ENST00000617219 PLCG2P16885 1265 aa10.55□□□□□ -0.72
CFHR3-206ENST00000617219 CCDC61Q9Y6R9 512 aa10.54□□□□□ -0.72
CFHR3-206ENST00000617219 NISCHQ9Y2I1 1504 aa10.53□□□□□ -0.72
CFHR3-206ENST00000617219 NUBP1P53384 320 aa10.46□□□□□ -0.74
CFHR3-206ENST00000617219 CIZ1Q9ULV3 898 aaPredicted RBP10.46□□□□□ -0.74
CFHR3-206ENST00000617219 LOC100996750A0A140TA64 210 aa10.45□□□□□ -0.74
CFHR3-206ENST00000617219 GSE1Q14687 1217 aa10.45□□□□□ -0.74
CFHR3-206ENST00000617219 FAM212AQ96EL1 285 aa10.45□□□□□ -0.74
CFHR3-206ENST00000617219 KRTAP4-6Q9BYQ5 205 aa10.45□□□□□ -0.74
CFHR3-206ENST00000617219 TSPYL2Q9H2G4 693 aaPredicted RBP10.44□□□□□ -0.74
CFHR3-206ENST00000617219 DCAF8Q5TAQ9 597 aa10.43□□□□□ -0.74
CFHR3-206ENST00000617219 MAP3K13O43283 966 aa10.41□□□□□ -0.74
CFHR3-206ENST00000617219 IRX5P78411 483 aaPredicted RBP10.4□□□□□ -0.74
CFHR3-206ENST00000617219 TRIM41Q8WV44 630 aa10.4□□□□□ -0.74
CFHR3-206ENST00000617219 RGS20O76081 388 aa10.39□□□□□ -0.75
CFHR3-206ENST00000617219 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
CFHR3-206ENST00000617219 PKD2Q13563 968 aa10.38□□□□□ -0.75
CFHR3-206ENST00000617219 ECM2O94769 699 aaPredicted RBP10.37□□□□□ -0.75
CFHR3-206ENST00000617219 ERBB3P21860 1342 aa10.36□□□□□ -0.75
CFHR3-206ENST00000617219 OCEL1Q9H607 264 aa10.3□□□□□ -0.76
CFHR3-206ENST00000617219 HCSTQ9UBK5 93 aa10.28□□□□□ -0.76
CFHR3-206ENST00000617219 DCAF8L2P0C7V8 631 aa10.27□□□□□ -0.77
CFHR3-206ENST00000617219 HOXB1P14653 301 aaPredicted RBP10.27□□□□□ -0.77
CFHR3-206ENST00000617219 CHRM1P11229 460 aaPredicted RBP10.25□□□□□ -0.77
CFHR3-206ENST00000617219 PYGBP11216 843 aa10.24□□□□□ -0.77
CFHR3-206ENST00000617219 ZNF687Q8N1G0 1237 aa10.22□□□□□ -0.77
CFHR3-206ENST00000617219 TAOK2Q9UL54 1235 aa10.22□□□□□ -0.77
CFHR3-206ENST00000617219 RGL2O15211 777 aa10.21□□□□□ -0.78
CFHR3-206ENST00000617219 C3orf67Q6ZVT6 689 aa10.21□□□□□ -0.78
CFHR3-206ENST00000617219 VARS2Q5ST30 1063 aaKnown RBP10.2□□□□□ -0.78
CFHR3-206ENST00000617219 Q6ZNB5 142 aa10.2□□□□□ -0.78
CFHR3-206ENST00000617219 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
CFHR3-206ENST00000617219 ZNF467Q7Z7K2 595 aaPredicted RBP10.17□□□□□ -0.78
CFHR3-206ENST00000617219 SGIP1Q9BQI5 828 aa10.16□□□□□ -0.78
CFHR3-206ENST00000617219 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
CFHR3-206ENST00000617219 PCDHB13Q9Y5F0 798 aa10.14□□□□□ -0.79
CFHR3-206ENST00000617219 RNF25Q96BH1 459 aaPredicted RBP10.13□□□□□ -0.79
CFHR3-206ENST00000617219 VGFO15240 615 aaPredicted RBP10.12□□□□□ -0.79
CFHR3-206ENST00000617219 HOXB3P14651 431 aaPredicted RBP10.11□□□□□ -0.79
CFHR3-206ENST00000617219 TMEM106CQ9BVX2 250 aa10.11□□□□□ -0.79
CFHR3-206ENST00000617219 ZNF710Q8N1W2 664 aa10.09□□□□□ -0.79
CFHR3-206ENST00000617219 CHGAP10645 457 aaKnown RBP10.07□□□□□ -0.8
CFHR3-206ENST00000617219 PCDHB8Q9UN66 801 aa10.07□□□□□ -0.8
CFHR3-206ENST00000617219 PDAP1Q13442 181 aaKnown RBP10.06□□□□□ -0.8
CFHR3-206ENST00000617219 IFNL1Q8IU54 200 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms