RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 EIF5BO60841 1220 aaKnown RBP23.51■■□□□ 1.35
ATXN2-227ENST00000616825 MIER1Q8N108 512 aa23.49■■□□□ 1.35
ATXN2-227ENST00000616825 RSF1Q96T23 1441 aaPredicted RBP23.48■■□□□ 1.35
ATXN2-227ENST00000616825 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
ATXN2-227ENST00000616825 A0A0G2JS52 829 aa23.46■■□□□ 1.35
ATXN2-227ENST00000616825 C14orf37Q86TY3 774 aa23.43■■□□□ 1.34
ATXN2-227ENST00000616825 EEA1Q15075 1411 aa23.43■■□□□ 1.34
ATXN2-227ENST00000616825 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
ATXN2-227ENST00000616825 IRX6P78412 446 aaPredicted RBP23.41■■□□□ 1.34
ATXN2-227ENST00000616825 SENP3Q9H4L4 574 aaPredicted RBP23.41■■□□□ 1.34
ATXN2-227ENST00000616825 CDCA8Q53HL2 280 aa23.4■■□□□ 1.34
ATXN2-227ENST00000616825 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.34
ATXN2-227ENST00000616825 PLEKHG5O94827 1062 aa23.38■■□□□ 1.33
ATXN2-227ENST00000616825 CFAP53Q96M91 514 aa23.37■■□□□ 1.33
ATXN2-227ENST00000616825 ZBTB7CA1YPR0 619 aa23.37■■□□□ 1.33
ATXN2-227ENST00000616825 NBR1Q14596 966 aa23.36■■□□□ 1.33
ATXN2-227ENST00000616825 KNSTRNQ9Y448 316 aa23.33■■□□□ 1.32
ATXN2-227ENST00000616825 ARXQ96QS3 562 aa23.32■■□□□ 1.32
ATXN2-227ENST00000616825 GOLGA3Q08378 1498 aa23.3■■□□□ 1.32
ATXN2-227ENST00000616825 CEP162Q5TB80 1403 aa23.28■■□□□ 1.32
ATXN2-227ENST00000616825 ARID4BQ4LE39 1312 aaPredicted RBP23.27■■□□□ 1.32
ATXN2-227ENST00000616825 CARD11Q9BXL7 1154 aa23.27■■□□□ 1.32
ATXN2-227ENST00000616825 WRNQ14191 1432 aaPredicted RBP eCLIP23.26■■□□□ 1.31
ATXN2-227ENST00000616825 BECN1Q14457 450 aa23.25■■□□□ 1.31
ATXN2-227ENST00000616825 PPM1GO15355 546 aaPredicted RBP23.24■■□□□ 1.31
ATXN2-227ENST00000616825 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
ATXN2-227ENST00000616825 HAP1P54257 671 aaPredicted RBP23.23■■□□□ 1.31
ATXN2-227ENST00000616825 DDRGK1Q96HY6 314 aa23.18■■□□□ 1.3
ATXN2-227ENST00000616825 NCLP19338 710 aaKnown RBP23.17■■□□□ 1.3
ATXN2-227ENST00000616825 CDK11BP21127 795 aaKnown RBP23.17■■□□□ 1.3
ATXN2-227ENST00000616825 NUDCQ9Y266 331 aa23.17■■□□□ 1.3
ATXN2-227ENST00000616825 ANP32EQ9BTT0 268 aa23.16■■□□□ 1.3
ATXN2-227ENST00000616825 GOLGA6L22H0YM25 854 aa23.15■■□□□ 1.3
ATXN2-227ENST00000616825 NEUROD2Q15784 382 aa23.14■■□□□ 1.3
ATXN2-227ENST00000616825 POGKQ9P215 609 aa23.14■■□□□ 1.3
ATXN2-227ENST00000616825 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.3
ATXN2-227ENST00000616825 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.29
ATXN2-227ENST00000616825 SENP3-EIF4A1A0A087X0R7 540 aa23.14■■□□□ 1.29
ATXN2-227ENST00000616825 MAPK8IP3Q9UPT6 1336 aa23.13■■□□□ 1.29
ATXN2-227ENST00000616825 GLIPR1L2Q4G1C9 344 aa23.13■■□□□ 1.29
ATXN2-227ENST00000616825 FTSJ3Q8IY81 847 aaKnown RBP23.13■■□□□ 1.29
ATXN2-227ENST00000616825 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
ATXN2-227ENST00000616825 SUPT16HQ9Y5B9 1047 aaKnown RBP23.08■■□□□ 1.29
ATXN2-227ENST00000616825 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.28
ATXN2-227ENST00000616825 LMOD2Q6P5Q4 547 aa23.08■■□□□ 1.28
ATXN2-227ENST00000616825 SIN3AQ96ST3 1273 aa23.06■■□□□ 1.28
ATXN2-227ENST00000616825 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
ATXN2-227ENST00000616825 CASC1Q6TDU7 716 aa23.03■■□□□ 1.28
ATXN2-227ENST00000616825 TRIM44Q96DX7 344 aaPredicted RBP23.03■■□□□ 1.28
ATXN2-227ENST00000616825 ZRSR1Q15695 479 aaKnown RBP23■■□□□ 1.27
ATXN2-227ENST00000616825 CHMP4BQ9H444 224 aaKnown RBP22.99■■□□□ 1.27
ATXN2-227ENST00000616825 TNNT2P45379 298 aaPredicted RBP22.99■■□□□ 1.27
ATXN2-227ENST00000616825 CCNB3Q8WWL7 1395 aa22.98■■□□□ 1.27
ATXN2-227ENST00000616825 FRAT1Q92837 279 aaPredicted RBP22.97■■□□□ 1.27
ATXN2-227ENST00000616825 U2SURPO15042 1029 aaKnown RBP22.96■■□□□ 1.27
ATXN2-227ENST00000616825 MS4A1P11836 297 aa22.96■■□□□ 1.27
ATXN2-227ENST00000616825 TMF1P82094 1093 aa22.94■■□□□ 1.26
ATXN2-227ENST00000616825 DCAF11Q8TEB1 546 aa22.94■■□□□ 1.26
ATXN2-227ENST00000616825 PPP4R2Q9NY27 417 aa22.93■■□□□ 1.26
ATXN2-227ENST00000616825 FHAD1B1AJZ9 1412 aa22.93■■□□□ 1.26
ATXN2-227ENST00000616825 RGS3P49796 1198 aa22.93■■□□□ 1.26
ATXN2-227ENST00000616825 PNNQ9H307 717 aaKnown RBP22.92■■□□□ 1.26
ATXN2-227ENST00000616825 TIMELESSQ9UNS1 1208 aa22.92■■□□□ 1.26
ATXN2-227ENST00000616825 CC2D1BQ5T0F9 858 aaKnown RBP22.91■■□□□ 1.26
ATXN2-227ENST00000616825 HDGFP51858 240 aaKnown RBP22.9■■□□□ 1.26
ATXN2-227ENST00000616825 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
ATXN2-227ENST00000616825 CARMIL1Q5VZK9 1371 aa22.87■■□□□ 1.25
ATXN2-227ENST00000616825 PTMAP06454 111 aaKnown RBP22.87■■□□□ 1.25
ATXN2-227ENST00000616825 NACADO15069 1562 aa22.87■■□□□ 1.25
ATXN2-227ENST00000616825 KANK1Q14678 1352 aa22.85■■□□□ 1.25
ATXN2-227ENST00000616825 OS9Q13438 667 aaPredicted RBP22.84■■□□□ 1.25
ATXN2-227ENST00000616825 NPHP1O15259 732 aa22.83■■□□□ 1.25
ATXN2-227ENST00000616825 SRPK2P78362 688 aaKnown RBP22.82■■□□□ 1.24
ATXN2-227ENST00000616825 FGD1P98174 961 aa22.82■■□□□ 1.24
ATXN2-227ENST00000616825 MLECQ14165 292 aa22.81■■□□□ 1.24
ATXN2-227ENST00000616825 KCNJ4P48050 445 aa22.79■■□□□ 1.24
ATXN2-227ENST00000616825 TPRNQ4KMQ1 711 aa22.77■■□□□ 1.24
ATXN2-227ENST00000616825 MORC1Q86VD1 984 aa22.77■■□□□ 1.24
ATXN2-227ENST00000616825 GGT6Q6P531 493 aa22.76■■□□□ 1.23
ATXN2-227ENST00000616825 CUX2O14529 1486 aa22.76■■□□□ 1.23
ATXN2-227ENST00000616825 SOX12O15370 315 aa22.75■■□□□ 1.23
ATXN2-227ENST00000616825 TRHP20396 242 aaPredicted RBP22.74■■□□□ 1.23
ATXN2-227ENST00000616825 ERICH6BQ5W0A0 696 aa22.74■■□□□ 1.23
ATXN2-227ENST00000616825 SAFB2Q14151 953 aaKnown RBP eCLIP22.73■■□□□ 1.23
ATXN2-227ENST00000616825 DNTTIP2Q5QJE6 756 aaKnown RBP22.73■■□□□ 1.23
ATXN2-227ENST00000616825 BAZ1AQ9NRL2 1556 aaPredicted RBP22.73■■□□□ 1.23
ATXN2-227ENST00000616825 B4GALNT3Q6L9W6 998 aa22.73■■□□□ 1.23
ATXN2-227ENST00000616825 PKD2Q13563 968 aa22.72■■□□□ 1.23
ATXN2-227ENST00000616825 HSP90AB1P08238 724 aaKnown RBP22.71■■□□□ 1.23
ATXN2-227ENST00000616825 GOLGA2Q08379 1002 aa22.7■■□□□ 1.22
ATXN2-227ENST00000616825 PLCB2Q00722 1185 aa22.68■■□□□ 1.22
ATXN2-227ENST00000616825 CCER2I3L3R5 266 aa22.68■■□□□ 1.22
ATXN2-227ENST00000616825 TAOK2Q9UL54 1235 aa22.67■■□□□ 1.22
ATXN2-227ENST00000616825 RTF1Q92541 710 aaKnown RBP22.65■■□□□ 1.22
ATXN2-227ENST00000616825 NAP1L2Q9ULW6 460 aaPredicted RBP22.65■■□□□ 1.22
ATXN2-227ENST00000616825 TULP1O00294 542 aaPredicted RBP22.65■■□□□ 1.22
ATXN2-227ENST00000616825 STK26Q9P289 416 aa22.65■■□□□ 1.22
ATXN2-227ENST00000616825 HSPA5P11021 654 aaKnown RBP22.64■■□□□ 1.22
ATXN2-227ENST00000616825 HDGFL2Q7Z4V5 671 aaPredicted RBP22.64■■□□□ 1.21
ATXN2-227ENST00000616825 EFCAB2Q5VUJ9 269 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms