RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.29□□□□□ -0.442e-8■■□□□ 13.9
SPTBN1-207ENST00000615901 DDX10Q13206 875 aaKnown RBP12.29□□□□□ -0.44
SPTBN1-207ENST00000615901 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.44
SPTBN1-207ENST00000615901 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
SPTBN1-207ENST00000615901 CARMIL1Q5VZK9 1371 aa12.26□□□□□ -0.45
SPTBN1-207ENST00000615901 EIF4G2P78344 907 aaKnown RBP eCLIP12.26□□□□□ -0.45
SPTBN1-207ENST00000615901 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
SPTBN1-207ENST00000615901 TMC1Q8TDI8 760 aa12.25□□□□□ -0.45
SPTBN1-207ENST00000615901 PDS5BQ9NTI5 1447 aa12.25□□□□□ -0.45
SPTBN1-207ENST00000615901 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-207ENST00000615901 RRP7BPQ9NSQ0 103 aa12.24□□□□□ -0.45
SPTBN1-207ENST00000615901 CFDP1Q9UEE9 299 aaPredicted RBP12.24□□□□□ -0.45
SPTBN1-207ENST00000615901 CCNB3Q8WWL7 1395 aa12.24□□□□□ -0.45
SPTBN1-207ENST00000615901 SOGA1O94964 1423 aa12.24□□□□□ -0.45
SPTBN1-207ENST00000615901 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.456e-7■□□□□ 10
SPTBN1-207ENST00000615901 MRS2Q9HD23 443 aa12.23□□□□□ -0.45
SPTBN1-207ENST00000615901 FAM9BQ8IZU0 186 aa12.22□□□□□ -0.45
SPTBN1-207ENST00000615901 UPF2Q9HAU5 1272 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-207ENST00000615901 FKBP8Q14318 412 aa12.22□□□□□ -0.45
SPTBN1-207ENST00000615901 FMN1Q68DA7 1419 aa12.2□□□□□ -0.46
SPTBN1-207ENST00000615901 CDCA8Q53HL2 280 aa12.2□□□□□ -0.46
SPTBN1-207ENST00000615901 KDM2AQ9Y2K7 1162 aa12.18□□□□□ -0.46
SPTBN1-207ENST00000615901 CARMIL2Q6F5E8 1435 aa12.15□□□□□ -0.46
SPTBN1-207ENST00000615901 CCDC136Q96JN2 1154 aa12.14□□□□□ -0.47
SPTBN1-207ENST00000615901 KCNH8Q96L42 1107 aa12.14□□□□□ -0.47
SPTBN1-207ENST00000615901 PPP1R15AO75807 674 aaPredicted RBP12.13□□□□□ -0.47
SPTBN1-207ENST00000615901 KANK1Q14678 1352 aa12.13□□□□□ -0.47
SPTBN1-207ENST00000615901 MIER1Q8N108 512 aa12.13□□□□□ -0.47
SPTBN1-207ENST00000615901 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
SPTBN1-207ENST00000615901 SETD5Q9C0A6 1442 aa12.12□□□□□ -0.47
SPTBN1-207ENST00000615901 HSP90AA1P07900 732 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-207ENST00000615901 NPM2Q86SE8 214 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-207ENST00000615901 ATAD2BQ9ULI0 1458 aa12.12□□□□□ -0.47
SPTBN1-207ENST00000615901 RAPGEF2Q9Y4G8 1499 aa12.11□□□□□ -0.47
SPTBN1-207ENST00000615901 MYH16Q9H6N6 1097 aa12.1□□□□□ -0.47
SPTBN1-207ENST00000615901 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
SPTBN1-207ENST00000615901 ANP32BQ92688 251 aaKnown RBP12.09□□□□□ -0.47
SPTBN1-207ENST00000615901 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.47
SPTBN1-207ENST00000615901 CFAP53Q96M91 514 aa12.08□□□□□ -0.48
SPTBN1-207ENST00000615901 KNSTRNQ9Y448 316 aa12.08□□□□□ -0.48
SPTBN1-207ENST00000615901 CARD11Q9BXL7 1154 aa12.06□□□□□ -0.48
SPTBN1-207ENST00000615901 CCDC18Q5T9S5 1454 aa12.05□□□□□ -0.48
SPTBN1-207ENST00000615901 PLPPR3Q6T4P5 718 aa12.03□□□□□ -0.48
SPTBN1-207ENST00000615901 SALL2Q9Y467 1007 aaPredicted RBP12.01□□□□□ -0.49
SPTBN1-207ENST00000615901 EIF5BO60841 1220 aaKnown RBP12□□□□□ -0.49
SPTBN1-207ENST00000615901 HIRIP3Q9BW71 556 aaPredicted RBP12□□□□□ -0.49
SPTBN1-207ENST00000615901 RGL3Q3MIN7 710 aa11.99□□□□□ -0.49
SPTBN1-207ENST00000615901 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
SPTBN1-207ENST00000615901 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
SPTBN1-207ENST00000615901 DDRGK1Q96HY6 314 aa11.98□□□□□ -0.49
SPTBN1-207ENST00000615901 ARID4BQ4LE39 1312 aaPredicted RBP11.97□□□□□ -0.49
SPTBN1-207ENST00000615901 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
SPTBN1-207ENST00000615901 BECN1Q14457 450 aa11.96□□□□□ -0.5
SPTBN1-207ENST00000615901 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-207ENST00000615901 TDRD9Q8NDG6 1382 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-207ENST00000615901 FHOD3Q2V2M9 1422 aa11.95□□□□□ -0.5
SPTBN1-207ENST00000615901 RAB3GAP2Q9H2M9 1393 aa11.95□□□□□ -0.5
SPTBN1-207ENST00000615901 CUX1P39880 1505 aa11.95□□□□□ -0.5
SPTBN1-207ENST00000615901 KIF21BO75037 1637 aa11.94□□□□□ -0.5
SPTBN1-207ENST00000615901 TMF1P82094 1093 aa11.94□□□□□ -0.5
SPTBN1-207ENST00000615901 SIN3AQ96ST3 1273 aa11.94□□□□□ -0.5
SPTBN1-207ENST00000615901 NUDCQ9Y266 331 aa11.93□□□□□ -0.5
SPTBN1-207ENST00000615901 MAPK8IP3Q9UPT6 1336 aa11.93□□□□□ -0.5
SPTBN1-207ENST00000615901 CCER2I3L3R5 266 aa11.93□□□□□ -0.5
SPTBN1-207ENST00000615901 C14orf37Q86TY3 774 aa11.93□□□□□ -0.5
SPTBN1-207ENST00000615901 CHMP4BQ9H444 224 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-207ENST00000615901 POGKQ9P215 609 aa11.92□□□□□ -0.5
SPTBN1-207ENST00000615901 PNNQ9H307 717 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-207ENST00000615901 FTSJ3Q8IY81 847 aaKnown RBP11.91□□□□□ -0.5
SPTBN1-207ENST00000615901 KANK4Q5T7N3 995 aaPredicted RBP11.9□□□□□ -0.5
SPTBN1-207ENST00000615901 HDGFP51858 240 aaKnown RBP11.9□□□□□ -0.5
SPTBN1-207ENST00000615901 MS4A1P11836 297 aa11.9□□□□□ -0.5
SPTBN1-207ENST00000615901 ERICH3Q5RHP9 1530 aa11.9□□□□□ -0.5
SPTBN1-207ENST00000615901 KTN1Q86UP2 1357 aaKnown RBP11.9□□□□□ -0.51
SPTBN1-207ENST00000615901 CASC1Q6TDU7 716 aa11.89□□□□□ -0.51
SPTBN1-207ENST00000615901 DCAF11Q8TEB1 546 aa11.89□□□□□ -0.51
SPTBN1-207ENST00000615901 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
SPTBN1-207ENST00000615901 IRX6P78412 446 aaPredicted RBP11.89□□□□□ -0.51
SPTBN1-207ENST00000615901 ANP32EQ9BTT0 268 aa11.88□□□□□ -0.51
SPTBN1-207ENST00000615901 RSPH4AQ5TD94 716 aa11.88□□□□□ -0.51
SPTBN1-207ENST00000615901 ROCK2O75116 1388 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-207ENST00000615901 NCAPD3P42695 1498 aa11.87□□□□□ -0.51
SPTBN1-207ENST00000615901 PKD2Q13563 968 aa11.86□□□□□ -0.51
SPTBN1-207ENST00000615901 NUP155O75694 1391 aa11.86□□□□□ -0.51
SPTBN1-207ENST00000615901 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
SPTBN1-207ENST00000615901 PPP4R2Q9NY27 417 aa11.86□□□□□ -0.51
SPTBN1-207ENST00000615901 EFCAB2Q5VUJ9 269 aa11.86□□□□□ -0.51
SPTBN1-207ENST00000615901 PRDM2Q13029 1718 aa11.85□□□□□ -0.51
SPTBN1-207ENST00000615901 GAPVD1Q14C86 1478 aa11.85□□□□□ -0.51
SPTBN1-207ENST00000615901 GOLGA6L22H0YM25 854 aa11.83□□□□□ -0.52
SPTBN1-207ENST00000615901 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
SPTBN1-207ENST00000615901 HSPA5P11021 654 aaKnown RBP11.82□□□□□ -0.52
SPTBN1-207ENST00000615901 RALBP1Q15311 655 aa11.82□□□□□ -0.52
SPTBN1-207ENST00000615901 MPHOSPH9Q99550 1183 aa11.82□□□□□ -0.52
SPTBN1-207ENST00000615901 CC2D1BQ5T0F9 858 aaKnown RBP11.82□□□□□ -0.52
SPTBN1-207ENST00000615901 SUPT16HQ9Y5B9 1047 aaKnown RBP11.81□□□□□ -0.52
SPTBN1-207ENST00000615901 TOP2BQ02880 1626 aa11.81□□□□□ -0.52
SPTBN1-207ENST00000615901 PPM1GO15355 546 aaPredicted RBP11.81□□□□□ -0.52
SPTBN1-207ENST00000615901 NBR1Q14596 966 aa11.81□□□□□ -0.52
SPTBN1-207ENST00000615901 UACAQ9BZF9 1416 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms