RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 DDRGK1Q96HY6 314 aa17.7■□□□□ 0.42
NLRC3-204ENST00000615877 PPP1R15AO75807 674 aaPredicted RBP17.67■□□□□ 0.42
NLRC3-204ENST00000615877 TPRNQ4KMQ1 711 aa17.67■□□□□ 0.42
NLRC3-204ENST00000615877 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
NLRC3-204ENST00000615877 TAOK2Q9UL54 1235 aa17.65■□□□□ 0.42
NLRC3-204ENST00000615877 KCNH8Q96L42 1107 aa17.63■□□□□ 0.41
NLRC3-204ENST00000615877 HIRIP3Q9BW71 556 aaPredicted RBP17.62■□□□□ 0.41
NLRC3-204ENST00000615877 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
NLRC3-204ENST00000615877 BECN1Q14457 450 aa17.62■□□□□ 0.41
NLRC3-204ENST00000615877 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
NLRC3-204ENST00000615877 TRIM44Q96DX7 344 aaPredicted RBP17.6■□□□□ 0.41
NLRC3-204ENST00000615877 NPHP1O15259 732 aa17.56■□□□□ 0.4
NLRC3-204ENST00000615877 PPM1GO15355 546 aaPredicted RBP17.56■□□□□ 0.4
NLRC3-204ENST00000615877 LMOD2Q6P5Q4 547 aa17.55■□□□□ 0.4
NLRC3-204ENST00000615877 CHMP7Q8WUX9 453 aaPredicted RBP17.54■□□□□ 0.4
NLRC3-204ENST00000615877 EIF4G2P78344 907 aaKnown RBP eCLIP17.53■□□□□ 0.4
NLRC3-204ENST00000615877 TSPY4P0CV99 314 aa17.52■□□□□ 0.4
NLRC3-204ENST00000615877 TSPY10P0CW01 314 aa17.52■□□□□ 0.4
NLRC3-204ENST00000615877 CCDC180Q9P1Z9 1646 aa17.51■□□□□ 0.39
NLRC3-204ENST00000615877 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
NLRC3-204ENST00000615877 SUPT16HQ9Y5B9 1047 aaKnown RBP17.5■□□□□ 0.39
NLRC3-204ENST00000615877 GOLGA6L22H0YM25 854 aa17.49■□□□□ 0.39
NLRC3-204ENST00000615877 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
NLRC3-204ENST00000615877 MYO15BQ96JP2 1530 aa17.48■□□□□ 0.39
NLRC3-204ENST00000615877 SCRIBQ14160 1630 aa17.48■□□□□ 0.39
NLRC3-204ENST00000615877 LAS1LQ9Y4W2 734 aaKnown RBP17.47■□□□□ 0.39
NLRC3-204ENST00000615877 RGL3Q3MIN7 710 aa17.47■□□□□ 0.39
NLRC3-204ENST00000615877 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
NLRC3-204ENST00000615877 RTN4Q9NQC3 1192 aaKnown RBP17.45■□□□□ 0.38
NLRC3-204ENST00000615877 ERICH6BQ5W0A0 696 aa17.45■□□□□ 0.38
NLRC3-204ENST00000615877 RRP7BPQ9NSQ0 103 aa17.44■□□□□ 0.38
NLRC3-204ENST00000615877 CLIP1P30622 1438 aa17.44■□□□□ 0.38
NLRC3-204ENST00000615877 NOP58Q9Y2X3 529 aaKnown RBP17.44■□□□□ 0.38
NLRC3-204ENST00000615877 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
NLRC3-204ENST00000615877 NAP1L5Q96NT1 182 aaPredicted RBP17.42■□□□□ 0.38
NLRC3-204ENST00000615877 PPP4R2Q9NY27 417 aa17.41■□□□□ 0.38
NLRC3-204ENST00000615877 PTMAP06454 111 aaKnown RBP17.4■□□□□ 0.38
NLRC3-204ENST00000615877 DNTTIP2Q5QJE6 756 aaKnown RBP17.36■□□□□ 0.37
NLRC3-204ENST00000615877 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
NLRC3-204ENST00000615877 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
NLRC3-204ENST00000615877 ZCCHC6Q5VYS8 1495 aaKnown RBP17.35■□□□□ 0.37
NLRC3-204ENST00000615877 CEP162Q5TB80 1403 aa17.34■□□□□ 0.37
NLRC3-204ENST00000615877 ZRSR1Q15695 479 aaKnown RBP17.33■□□□□ 0.37
NLRC3-204ENST00000615877 CLSTN1O94985 981 aa17.31■□□□□ 0.36
NLRC3-204ENST00000615877 NAP1L2Q9ULW6 460 aaPredicted RBP17.31■□□□□ 0.36
NLRC3-204ENST00000615877 GOLGA3Q08378 1498 aa17.3■□□□□ 0.36
NLRC3-204ENST00000615877 SOX12O15370 315 aa17.3■□□□□ 0.36
NLRC3-204ENST00000615877 CASC1Q6TDU7 716 aa17.29■□□□□ 0.36
NLRC3-204ENST00000615877 DEKP35659 375 aaKnown RBP17.27■□□□□ 0.36
NLRC3-204ENST00000615877 FTSJ3Q8IY81 847 aaKnown RBP17.27■□□□□ 0.36
NLRC3-204ENST00000615877 RGS3P49796 1198 aa17.26■□□□□ 0.35
NLRC3-204ENST00000615877 MLECQ14165 292 aa17.26■□□□□ 0.35
NLRC3-204ENST00000615877 OS9Q13438 667 aaPredicted RBP17.26■□□□□ 0.35
NLRC3-204ENST00000615877 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
NLRC3-204ENST00000615877 CFAP53Q96M91 514 aa17.25■□□□□ 0.35
NLRC3-204ENST00000615877 POGKQ9P215 609 aa17.25■□□□□ 0.35
NLRC3-204ENST00000615877 B4GALNT3Q6L9W6 998 aa17.25■□□□□ 0.35
NLRC3-204ENST00000615877 ISY1Q9ULR0 285 aaKnown RBP17.24■□□□□ 0.35
NLRC3-204ENST00000615877 PLCB2Q00722 1185 aa17.23■□□□□ 0.35
NLRC3-204ENST00000615877 KNSTRNQ9Y448 316 aa17.22■□□□□ 0.35
NLRC3-204ENST00000615877 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
NLRC3-204ENST00000615877 PLEKHD1A6NEE1 506 aa17.21■□□□□ 0.35
NLRC3-204ENST00000615877 EEA1Q15075 1411 aa17.21■□□□□ 0.35
NLRC3-204ENST00000615877 RBM19Q9Y4C8 960 aaKnown RBP17.2■□□□□ 0.34
NLRC3-204ENST00000615877 MAPK8IP3Q9UPT6 1336 aa17.19■□□□□ 0.34
NLRC3-204ENST00000615877 HSP90AB1P08238 724 aaKnown RBP17.19■□□□□ 0.34
NLRC3-204ENST00000615877 FGD1P98174 961 aa17.18■□□□□ 0.34
NLRC3-204ENST00000615877 CARD11Q9BXL7 1154 aa17.18■□□□□ 0.34
NLRC3-204ENST00000615877 CDCA8Q53HL2 280 aa17.18■□□□□ 0.34
NLRC3-204ENST00000615877 FRAT1Q92837 279 aaPredicted RBP17.18■□□□□ 0.34
NLRC3-204ENST00000615877 U2SURPO15042 1029 aaKnown RBP17.16■□□□□ 0.34
NLRC3-204ENST00000615877 SIN3AQ96ST3 1273 aa17.16■□□□□ 0.34
NLRC3-204ENST00000615877 L1TD1Q5T7N2 865 aaKnown RBP17.16■□□□□ 0.34
NLRC3-204ENST00000615877 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
NLRC3-204ENST00000615877 AMER1Q5JTC6 1135 aaPredicted RBP17.14■□□□□ 0.33
NLRC3-204ENST00000615877 KCNJ4P48050 445 aa17.14■□□□□ 0.33
NLRC3-204ENST00000615877 TNIKQ9UKE5 1360 aa17.12■□□□□ 0.33
NLRC3-204ENST00000615877 SAFB2Q14151 953 aaKnown RBP eCLIP17.12■□□□□ 0.33
NLRC3-204ENST00000615877 HSCBQ8IWL3 235 aa17.1■□□□□ 0.33
NLRC3-204ENST00000615877 GOLGA6L6A8MZA4 724 aa17.1■□□□□ 0.33
NLRC3-204ENST00000615877 MSNP26038 577 aaKnown RBP17.09■□□□□ 0.33
NLRC3-204ENST00000615877 CFDP1Q9UEE9 299 aaPredicted RBP17.08■□□□□ 0.33
NLRC3-204ENST00000615877 ZNF330Q9Y3S2 320 aaPredicted RBP17.08■□□□□ 0.33
NLRC3-204ENST00000615877 CCER2I3L3R5 266 aa17.08■□□□□ 0.33
NLRC3-204ENST00000615877 NUDCQ9Y266 331 aa17.06■□□□□ 0.32
NLRC3-204ENST00000615877 MS4A1P11836 297 aa17.06■□□□□ 0.32
NLRC3-204ENST00000615877 CHMP4BQ9H444 224 aaKnown RBP17.06■□□□□ 0.32
NLRC3-204ENST00000615877 CHAF1AQ13111 956 aaPredicted RBP17.05■□□□□ 0.32
NLRC3-204ENST00000615877 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
NLRC3-204ENST00000615877 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
NLRC3-204ENST00000615877 SPRYD3Q8NCJ5 442 aa17.03■□□□□ 0.32
NLRC3-204ENST00000615877 PAK3O75914 559 aaPredicted RBP17.03■□□□□ 0.32
NLRC3-204ENST00000615877 ERCC6Q03468 1493 aa17.03■□□□□ 0.32
NLRC3-204ENST00000615877 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.01■□□□□ 0.31
NLRC3-204ENST00000615877 SRPK2P78362 688 aaKnown RBP17.01■□□□□ 0.31
NLRC3-204ENST00000615877 STK26Q9P289 416 aa17■□□□□ 0.31
NLRC3-204ENST00000615877 NRDCO43847 1150 aa17■□□□□ 0.31
NLRC3-204ENST00000615877 APBB1O00213 710 aa16.99■□□□□ 0.31
NLRC3-204ENST00000615877 WRNQ14191 1432 aaPredicted RBP eCLIP16.99■□□□□ 0.31
NLRC3-204ENST00000615877 TSHZ2Q9NRE2 1034 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms