RNA–Protein interactions for RNA: ENST00000615676.1

YTHDF3-208, Transcript of YTH N6-methyladenosine RNA binding protein 3, humanhuman

TSL 1 (best)

Gene YTHDF3, Length 5,092 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3-208ENST00000615676 CDCA8Q53HL2 280 aa18■□□□□ 0.47
YTHDF3-208ENST00000615676 CFAP53Q96M91 514 aa17.98■□□□□ 0.47
YTHDF3-208ENST00000615676 BECN1Q14457 450 aa17.98■□□□□ 0.47
YTHDF3-208ENST00000615676 C14orf37Q86TY3 774 aa17.97■□□□□ 0.47
YTHDF3-208ENST00000615676 NCLP19338 710 aaKnown RBP17.97■□□□□ 0.47
YTHDF3-208ENST00000615676 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
YTHDF3-208ENST00000615676 ANP32EQ9BTT0 268 aa17.96■□□□□ 0.47
YTHDF3-208ENST00000615676 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
YTHDF3-208ENST00000615676 ZBTB7CA1YPR0 619 aa17.94■□□□□ 0.46
YTHDF3-208ENST00000615676 RRP7BPQ9NSQ0 103 aa17.94■□□□□ 0.46
YTHDF3-208ENST00000615676 NBR1Q14596 966 aa17.92■□□□□ 0.46
YTHDF3-208ENST00000615676 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
YTHDF3-208ENST00000615676 EEA1Q15075 1411 aa17.92■□□□□ 0.46
YTHDF3-208ENST00000615676 GOLGA6L22H0YM25 854 aa17.92■□□□□ 0.46
YTHDF3-208ENST00000615676 ARXQ96QS3 562 aa17.88■□□□□ 0.45
YTHDF3-208ENST00000615676 KNSTRNQ9Y448 316 aa17.88■□□□□ 0.45
YTHDF3-208ENST00000615676 HAP1P54257 671 aaPredicted RBP17.87■□□□□ 0.45
YTHDF3-208ENST00000615676 CASC1Q6TDU7 716 aa17.86■□□□□ 0.45
YTHDF3-208ENST00000615676 RGL3Q3MIN7 710 aa17.84■□□□□ 0.45
YTHDF3-208ENST00000615676 GOLGA3Q08378 1498 aa17.84■□□□□ 0.45
YTHDF3-208ENST00000615676 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.45
YTHDF3-208ENST00000615676 MIER1Q8N108 512 aa17.83■□□□□ 0.44
YTHDF3-208ENST00000615676 ZRSR1Q15695 479 aaKnown RBP17.82■□□□□ 0.44
YTHDF3-208ENST00000615676 HIRIP3Q9BW71 556 aaPredicted RBP17.82■□□□□ 0.44
YTHDF3-208ENST00000615676 IRX6P78412 446 aaPredicted RBP17.82■□□□□ 0.44
YTHDF3-208ENST00000615676 ARID4BQ4LE39 1312 aaPredicted RBP17.82■□□□□ 0.44
YTHDF3-208ENST00000615676 TRIM44Q96DX7 344 aaPredicted RBP17.81■□□□□ 0.44
YTHDF3-208ENST00000615676 NUDCQ9Y266 331 aa17.8■□□□□ 0.44
YTHDF3-208ENST00000615676 PLEKHG5O94827 1062 aa17.8■□□□□ 0.44
YTHDF3-208ENST00000615676 MAPK8IP3Q9UPT6 1336 aa17.79■□□□□ 0.44
YTHDF3-208ENST00000615676 FTSJ3Q8IY81 847 aaKnown RBP17.79■□□□□ 0.44
YTHDF3-208ENST00000615676 CHMP4BQ9H444 224 aaKnown RBP17.78■□□□□ 0.44
YTHDF3-208ENST00000615676 CARD11Q9BXL7 1154 aa17.78■□□□□ 0.44
YTHDF3-208ENST00000615676 PPM1GO15355 546 aaPredicted RBP17.75■□□□□ 0.43
YTHDF3-208ENST00000615676 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
YTHDF3-208ENST00000615676 POGKQ9P215 609 aa17.73■□□□□ 0.43
YTHDF3-208ENST00000615676 CEP162Q5TB80 1403 aa17.73■□□□□ 0.43
YTHDF3-208ENST00000615676 KIF27Q86VH2 1401 aa17.73■□□□□ 0.43
YTHDF3-208ENST00000615676 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
YTHDF3-208ENST00000615676 MS4A1P11836 297 aa17.72■□□□□ 0.43
YTHDF3-208ENST00000615676 PNNQ9H307 717 aaKnown RBP17.7■□□□□ 0.42
YTHDF3-208ENST00000615676 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
YTHDF3-208ENST00000615676 PTMAP06454 111 aaKnown RBP17.69■□□□□ 0.42
YTHDF3-208ENST00000615676 CCDC180Q9P1Z9 1646 aa17.65■□□□□ 0.42
YTHDF3-208ENST00000615676 LAS1LQ9Y4W2 734 aaKnown RBP17.65■□□□□ 0.42
YTHDF3-208ENST00000615676 NEUROD2Q15784 382 aa17.64■□□□□ 0.41
YTHDF3-208ENST00000615676 CEP164Q9UPV0 1460 aa17.64■□□□□ 0.41
YTHDF3-208ENST00000615676 HDGFP51858 240 aaKnown RBP17.63■□□□□ 0.41
YTHDF3-208ENST00000615676 LMOD2Q6P5Q4 547 aa17.63■□□□□ 0.41
YTHDF3-208ENST00000615676 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
YTHDF3-208ENST00000615676 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
YTHDF3-208ENST00000615676 NPHP1O15259 732 aa17.61■□□□□ 0.41
YTHDF3-208ENST00000615676 OS9Q13438 667 aaPredicted RBP17.59■□□□□ 0.41
YTHDF3-208ENST00000615676 KANK1Q14678 1352 aa17.59■□□□□ 0.41
YTHDF3-208ENST00000615676 SUPT16HQ9Y5B9 1047 aaKnown RBP17.59■□□□□ 0.41
YTHDF3-208ENST00000615676 TNNT2P45379 298 aaPredicted RBP17.59■□□□□ 0.41
YTHDF3-208ENST00000615676 PPP4R2Q9NY27 417 aa17.58■□□□□ 0.41
YTHDF3-208ENST00000615676 CCNB3Q8WWL7 1395 aa17.58■□□□□ 0.4
YTHDF3-208ENST00000615676 TMF1P82094 1093 aa17.58■□□□□ 0.4
YTHDF3-208ENST00000615676 GOLGA6L6A8MZA4 724 aa17.57■□□□□ 0.4
YTHDF3-208ENST00000615676 DNTTIP2Q5QJE6 756 aaKnown RBP17.57■□□□□ 0.4
YTHDF3-208ENST00000615676 FRAT1Q92837 279 aaPredicted RBP17.57■□□□□ 0.4
YTHDF3-208ENST00000615676 FGD1P98174 961 aa17.57■□□□□ 0.4
YTHDF3-208ENST00000615676 ERICH6BQ5W0A0 696 aa17.56■□□□□ 0.4
YTHDF3-208ENST00000615676 U2SURPO15042 1029 aaKnown RBP17.55■□□□□ 0.4
YTHDF3-208ENST00000615676 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
YTHDF3-208ENST00000615676 NRDCO43847 1150 aa17.54■□□□□ 0.4
YTHDF3-208ENST00000615676 KCNJ4P48050 445 aa17.53■□□□□ 0.4
YTHDF3-208ENST00000615676 ERCC6Q03468 1493 aa17.53■□□□□ 0.4
YTHDF3-208ENST00000615676 GOLGA2Q08379 1002 aa17.53■□□□□ 0.4
YTHDF3-208ENST00000615676 RGS3P49796 1198 aa17.53■□□□□ 0.4
YTHDF3-208ENST00000615676 TIMELESSQ9UNS1 1208 aa17.52■□□□□ 0.4
YTHDF3-208ENST00000615676 CFAP44Q96MT7 982 aa17.52■□□□□ 0.4
YTHDF3-208ENST00000615676 HSP90AB1P08238 724 aaKnown RBP17.51■□□□□ 0.39
YTHDF3-208ENST00000615676 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
YTHDF3-208ENST00000615676 SENP3-EIF4A1A0A087X0R7 540 aa17.48■□□□□ 0.39
YTHDF3-208ENST00000615676 TPRNQ4KMQ1 711 aa17.48■□□□□ 0.39
YTHDF3-208ENST00000615676 TULP1O00294 542 aaPredicted RBP17.47■□□□□ 0.39
YTHDF3-208ENST00000615676 NACADO15069 1562 aa17.47■□□□□ 0.39
YTHDF3-208ENST00000615676 DCAF11Q8TEB1 546 aa17.47■□□□□ 0.39
YTHDF3-208ENST00000615676 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
YTHDF3-208ENST00000615676 MCCP23508 829 aa17.46■□□□□ 0.39
YTHDF3-208ENST00000615676 GOLGA6L4A6NEF3 574 aa17.46■□□□□ 0.39
YTHDF3-208ENST00000615676 SRPK2P78362 688 aaKnown RBP17.45■□□□□ 0.38
YTHDF3-208ENST00000615676 PLCB2Q00722 1185 aa17.45■□□□□ 0.38
YTHDF3-208ENST00000615676 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
YTHDF3-208ENST00000615676 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
YTHDF3-208ENST00000615676 HSCBQ8IWL3 235 aa17.43■□□□□ 0.38
YTHDF3-208ENST00000615676 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
YTHDF3-208ENST00000615676 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
YTHDF3-208ENST00000615676 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
YTHDF3-208ENST00000615676 TAOK2Q9UL54 1235 aa17.39■□□□□ 0.37
YTHDF3-208ENST00000615676 CARMIL1Q5VZK9 1371 aa17.38■□□□□ 0.37
YTHDF3-208ENST00000615676 IPO8O15397 1037 aaKnown RBP17.38■□□□□ 0.37
YTHDF3-208ENST00000615676 CALD1Q05682 793 aaKnown RBP17.38■□□□□ 0.37
YTHDF3-208ENST00000615676 CHMP4AQ9BY43 222 aa17.38■□□□□ 0.37
YTHDF3-208ENST00000615676 CCER2I3L3R5 266 aa17.37■□□□□ 0.37
YTHDF3-208ENST00000615676 NAP1L5Q96NT1 182 aaPredicted RBP17.35■□□□□ 0.37
YTHDF3-208ENST00000615676 MLECQ14165 292 aa17.35■□□□□ 0.37
YTHDF3-208ENST00000615676 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms