RNA–Protein interactions for RNA: ENST00000613994.1

TULP4-205, Transcript of tubby like protein 4, humanhuman

TSL 3

Gene TULP4, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-205ENST00000613994 SPDYE1Q8NFV5 336 aaPredicted RBP12.24□□□□□ -0.45
TULP4-205ENST00000613994 BICRAQ9NZM4 1560 aa12.24□□□□□ -0.45
TULP4-205ENST00000613994 ZCCHC6Q5VYS8 1495 aaKnown RBP12.23□□□□□ -0.45
TULP4-205ENST00000613994 TSHZ2Q9NRE2 1034 aa12.22□□□□□ -0.45
TULP4-205ENST00000613994 NUBP1P53384 320 aa12.21□□□□□ -0.45
TULP4-205ENST00000613994 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
TULP4-205ENST00000613994 HS6ST3Q8IZP7 471 aa12.2□□□□□ -0.46
TULP4-205ENST00000613994 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
TULP4-205ENST00000613994 RNF25Q96BH1 459 aaPredicted RBP12.19□□□□□ -0.46
TULP4-205ENST00000613994 TAOK2Q9UL54 1235 aa12.19□□□□□ -0.46
TULP4-205ENST00000613994 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
TULP4-205ENST00000613994 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
TULP4-205ENST00000613994 PRKCSHP14314 528 aaPredicted RBP12.17□□□□□ -0.46
TULP4-205ENST00000613994 DCAF1Q9Y4B6 1507 aa12.16□□□□□ -0.46
TULP4-205ENST00000613994 PRR29P0C7W0 189 aa12.15□□□□□ -0.46
TULP4-205ENST00000613994 CREBZFQ9NS37 354 aa12.13□□□□□ -0.47
TULP4-205ENST00000613994 FAM212AQ96EL1 285 aa12.12□□□□□ -0.47
TULP4-205ENST00000613994 RIOK3O14730 519 aaKnown RBP12.11□□□□□ -0.47
TULP4-205ENST00000613994 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
TULP4-205ENST00000613994 SCRIBQ14160 1630 aa12.09□□□□□ -0.47
TULP4-205ENST00000613994 MNX1P50219 401 aaPredicted RBP12.08□□□□□ -0.48
TULP4-205ENST00000613994 REM2Q8IYK8 340 aaPredicted RBP12.08□□□□□ -0.48
TULP4-205ENST00000613994 TPRNQ4KMQ1 711 aa12.04□□□□□ -0.48
TULP4-205ENST00000613994 NKX1-1Q15270 411 aaPredicted RBP12.03□□□□□ -0.48
TULP4-205ENST00000613994 STK25O00506 426 aa12.02□□□□□ -0.49
TULP4-205ENST00000613994 VGFO15240 615 aaPredicted RBP12.02□□□□□ -0.49
TULP4-205ENST00000613994 RASEFQ8IZ41 740 aa12.02□□□□□ -0.49
TULP4-205ENST00000613994 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
TULP4-205ENST00000613994 SHROOM4Q9ULL8 1493 aa11.99□□□□□ -0.49
TULP4-205ENST00000613994 GTPBP6O43824 516 aaPredicted RBP11.97□□□□□ -0.49
TULP4-205ENST00000613994 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
TULP4-205ENST00000613994 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
TULP4-205ENST00000613994 NBR1Q14596 966 aa11.95□□□□□ -0.5
TULP4-205ENST00000613994 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
TULP4-205ENST00000613994 EIF4G1Q04637 1599 aaKnown RBP11.93□□□□□ -0.5
TULP4-205ENST00000613994 PYGBP11216 843 aa11.93□□□□□ -0.5
TULP4-205ENST00000613994 SGIP1Q9BQI5 828 aa11.93□□□□□ -0.5
TULP4-205ENST00000613994 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
TULP4-205ENST00000613994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.92□□□□□ -0.5
TULP4-205ENST00000613994 ZFP91Q96JP5 570 aaPredicted RBP11.92□□□□□ -0.5
TULP4-205ENST00000613994 BCL11BQ9C0K0 894 aaPredicted RBP11.92□□□□□ -0.5
TULP4-205ENST00000613994 RYDENQ9NUL5 291 aaKnown RBP11.86□□□□□ -0.51
TULP4-205ENST00000613994 CHADLQ6NUI6 762 aa11.81□□□□□ -0.52
TULP4-205ENST00000613994 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
TULP4-205ENST00000613994 ZNF467Q7Z7K2 595 aaPredicted RBP11.77□□□□□ -0.53
TULP4-205ENST00000613994 FARP1Q9Y4F1 1045 aaPredicted RBP11.74□□□□□ -0.53
TULP4-205ENST00000613994 PDAP1Q13442 181 aaKnown RBP11.72□□□□□ -0.53
TULP4-205ENST00000613994 PCDHB8Q9UN66 801 aa11.69□□□□□ -0.54
TULP4-205ENST00000613994 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
TULP4-205ENST00000613994 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
TULP4-205ENST00000613994 P3H3Q8IVL6 736 aa11.65□□□□□ -0.54
TULP4-205ENST00000613994 CCDC61Q9Y6R9 512 aa11.65□□□□□ -0.54
TULP4-205ENST00000613994 PSEN1P49768 467 aa11.64□□□□□ -0.55
TULP4-205ENST00000613994 ZNF579Q8NAF0 562 aaKnown RBP11.63□□□□□ -0.55
TULP4-205ENST00000613994 CADPS2Q86UW7 1296 aa11.62□□□□□ -0.55
TULP4-205ENST00000613994 WDR70Q9NW82 654 aa11.62□□□□□ -0.55
TULP4-205ENST00000613994 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
TULP4-205ENST00000613994 MFRPQ9BY79 579 aa11.59□□□□□ -0.55
TULP4-205ENST00000613994 NCAPD3P42695 1498 aa11.58□□□□□ -0.56
TULP4-205ENST00000613994 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
TULP4-205ENST00000613994 ATAD2BQ9ULI0 1458 aa11.56□□□□□ -0.56
TULP4-205ENST00000613994 KCNV2Q8TDN2 545 aa11.55□□□□□ -0.56
TULP4-205ENST00000613994 IFNL1Q8IU54 200 aa11.54□□□□□ -0.56
TULP4-205ENST00000613994 MAP3K13O43283 966 aa11.51□□□□□ -0.57
TULP4-205ENST00000613994 SMARCA4P51532 1647 aa11.5□□□□□ -0.57
TULP4-205ENST00000613994 EFCAB3Q8N7B9 438 aa11.5□□□□□ -0.57
TULP4-205ENST00000613994 KIF12Q96FN5 646 aa11.5□□□□□ -0.57
TULP4-205ENST00000613994 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
TULP4-205ENST00000613994 NLRP6P59044 892 aa11.49□□□□□ -0.57
TULP4-205ENST00000613994 PPP1R37O75864 691 aa11.48□□□□□ -0.57
TULP4-205ENST00000613994 SMARCA2P51531 1590 aa11.48□□□□□ -0.57
TULP4-205ENST00000613994 SOX12O15370 315 aa11.47□□□□□ -0.57
TULP4-205ENST00000613994 FBXO22Q8NEZ5 403 aa11.47□□□□□ -0.57
TULP4-205ENST00000613994 BAZ1AQ9NRL2 1556 aaPredicted RBP11.46□□□□□ -0.57
TULP4-205ENST00000613994 PHF8Q9UPP1 1060 aa11.46□□□□□ -0.57
TULP4-205ENST00000613994 ERCC6Q03468 1493 aa11.45□□□□□ -0.58
TULP4-205ENST00000613994 CHRDL2Q6WN34 429 aa11.44□□□□□ -0.58
TULP4-205ENST00000613994 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
TULP4-205ENST00000613994 HMGXB3Q12766 1538 aa11.44□□□□□ -0.58
TULP4-205ENST00000613994 NESP48681 1621 aa11.43□□□□□ -0.58
TULP4-205ENST00000613994 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
TULP4-205ENST00000613994 BAZ1BQ9UIG0 1483 aaKnown RBP11.43□□□□□ -0.58
TULP4-205ENST00000613994 MROH2BQ7Z745 1585 aa11.42□□□□□ -0.58
TULP4-205ENST00000613994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
TULP4-205ENST00000613994 ZRANB1Q9UGI0 708 aa11.41□□□□□ -0.58
TULP4-205ENST00000613994 TULP1O00294 542 aaPredicted RBP11.39□□□□□ -0.59
TULP4-205ENST00000613994 E2F4Q16254 413 aa11.39□□□□□ -0.59
TULP4-205ENST00000613994 ARHGEF1Q92888 912 aaKnown RBP11.39□□□□□ -0.59
TULP4-205ENST00000613994 CUX2O14529 1486 aa11.38□□□□□ -0.59
TULP4-205ENST00000613994 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
TULP4-205ENST00000613994 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
TULP4-205ENST00000613994 PHF12Q96QT6 1004 aa11.36□□□□□ -0.59
TULP4-205ENST00000613994 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
TULP4-205ENST00000613994 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
TULP4-205ENST00000613994 NCKAP5LQ9HCH0 1330 aa11.32□□□□□ -0.6
TULP4-205ENST00000613994 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
TULP4-205ENST00000613994 PDE4AP27815 886 aa11.3□□□□□ -0.6
TULP4-205ENST00000613994 TMEM106CQ9BVX2 250 aa11.3□□□□□ -0.6
TULP4-205ENST00000613994 SEMA3EO15041 775 aa11.29□□□□□ -0.6
TULP4-205ENST00000613994 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms