RNA–Protein interactions for RNA: ENST00000612674.1

USP12-202, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 2

Gene USP12, Length 712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-202ENST00000612674 OTUD5Q96G74 571 aa15.54■□□□□ 0.08
USP12-202ENST00000612674 ATMINO43313 823 aaPredicted RBP15.51■□□□□ 0.07
USP12-202ENST00000612674 PLEKHG5O94827 1062 aa15.47■□□□□ 0.07
USP12-202ENST00000612674 KIF12Q96FN5 646 aa15.47■□□□□ 0.07
USP12-202ENST00000612674 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
USP12-202ENST00000612674 METRNQ9UJH8 293 aa15.44■□□□□ 0.06
USP12-202ENST00000612674 SLC39A7Q92504 469 aa15.41■□□□□ 0.06
USP12-202ENST00000612674 C7P10643 843 aa15.4■□□□□ 0.06
USP12-202ENST00000612674 ATN1P54259 1190 aaPredicted RBP15.38■□□□□ 0.05
USP12-202ENST00000612674 PLCD3Q8N3E9 789 aa15.38■□□□□ 0.05
USP12-202ENST00000612674 MAP3K13O43283 966 aa15.37■□□□□ 0.05
USP12-202ENST00000612674 TRPC6Q9Y210 931 aa15.37■□□□□ 0.05
USP12-202ENST00000612674 POTEJP0CG39 1038 aa15.36■□□□□ 0.05
USP12-202ENST00000612674 BMP2KQ9NSY1 1161 aaPredicted RBP15.34■□□□□ 0.05
USP12-202ENST00000612674 FKBP8Q14318 412 aa15.33■□□□□ 0.04
USP12-202ENST00000612674 NUBP1P53384 320 aa15.28■□□□□ 0.04
USP12-202ENST00000612674 TIE1P35590 1138 aa15.26■□□□□ 0.03
USP12-202ENST00000612674 POTEFA5A3E0 1075 aa15.25■□□□□ 0.03
USP12-202ENST00000612674 ZBTB47Q9UFB7 747 aaPredicted RBP15.24■□□□□ 0.03
USP12-202ENST00000612674 TTLL13PA6NNM8 815 aa15.2■□□□□ 0.02
USP12-202ENST00000612674 MAMSTRQ6ZN01 415 aa15.2■□□□□ 0.02
USP12-202ENST00000612674 SGIP1Q9BQI5 828 aa15.19■□□□□ 0.02
USP12-202ENST00000612674 PCDHB13Q9Y5F0 798 aa15.18■□□□□ 0.02
USP12-202ENST00000612674 POTEMA6NI47 508 aa15.15■□□□□ 0.02
USP12-202ENST00000612674 PLSCR2Q9NRY7 297 aa15.13■□□□□ 0.01
USP12-202ENST00000612674 COLQQ9Y215 455 aaPredicted RBP15.13■□□□□ 0.01
USP12-202ENST00000612674 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
USP12-202ENST00000612674 FAM212AQ96EL1 285 aa15.12■□□□□ 0.01
USP12-202ENST00000612674 SCUBE2Q9NQ36 999 aa15.11■□□□□ 0.01
USP12-202ENST00000612674 POTEGQ6S5H5 508 aa15.1■□□□□ 0.01
USP12-202ENST00000612674 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
USP12-202ENST00000612674 SEC24BO95487 1268 aa15.06■□□□□ 0
USP12-202ENST00000612674 NISCHQ9Y2I1 1504 aa15.04■□□□□ -0
USP12-202ENST00000612674 IER5LQ5T953 404 aa15.04■□□□□ -0
USP12-202ENST00000612674 LCE2DQ5TA82 110 aaPredicted RBP15.04■□□□□ -0
USP12-202ENST00000612674 FBXO3Q9UK99 471 aa15.01□□□□□ -0.01
USP12-202ENST00000612674 TMEM106CQ9BVX2 250 aa15□□□□□ -0.01
USP12-202ENST00000612674 DCAF8Q5TAQ9 597 aa14.99□□□□□ -0.01
USP12-202ENST00000612674 FAM163AQ96GL9 167 aaPredicted RBP14.98□□□□□ -0.01
USP12-202ENST00000612674 PYGBP11216 843 aa14.96□□□□□ -0.01
USP12-202ENST00000612674 VASPP50552 380 aaPredicted RBP14.89□□□□□ -0.03
USP12-202ENST00000612674 PCDHB8Q9UN66 801 aa14.88□□□□□ -0.03
USP12-202ENST00000612674 IRX5P78411 483 aaPredicted RBP14.87□□□□□ -0.03
USP12-202ENST00000612674 PCDH10Q9P2E7 1040 aa14.87□□□□□ -0.03
USP12-202ENST00000612674 PLCG2P16885 1265 aa14.86□□□□□ -0.03
USP12-202ENST00000612674 KLHL34Q8N239 644 aa14.84□□□□□ -0.03
USP12-202ENST00000612674 SLAIN1Q8ND83 568 aa14.8□□□□□ -0.04
USP12-202ENST00000612674 GSE1Q14687 1217 aa14.78□□□□□ -0.04
USP12-202ENST00000612674 OCEL1Q9H607 264 aa14.78□□□□□ -0.04
USP12-202ENST00000612674 ZNF467Q7Z7K2 595 aaPredicted RBP14.71□□□□□ -0.05
USP12-202ENST00000612674 CHRM1P11229 460 aaPredicted RBP14.7□□□□□ -0.06
USP12-202ENST00000612674 ST18O60284 1047 aa14.68□□□□□ -0.06
USP12-202ENST00000612674 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
USP12-202ENST00000612674 PDCD7Q8N8D1 485 aaKnown RBP14.64□□□□□ -0.07
USP12-202ENST00000612674 PSEN1P49768 467 aa14.61□□□□□ -0.07
USP12-202ENST00000612674 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
USP12-202ENST00000612674 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.6□□□□□ -0.07
USP12-202ENST00000612674 GOLGA2Q08379 1002 aa14.59□□□□□ -0.07
USP12-202ENST00000612674 MKRN3Q13064 507 aaKnown RBP14.59□□□□□ -0.07
USP12-202ENST00000612674 SPOCK2Q92563 424 aa14.58□□□□□ -0.08
USP12-202ENST00000612674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.53□□□□□ -0.085e-7■■■■□ 23.9
USP12-202ENST00000612674 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
USP12-202ENST00000612674 PDAP1Q13442 181 aaKnown RBP14.52□□□□□ -0.09
USP12-202ENST00000612674 SNPHO15079 494 aa14.5□□□□□ -0.09
USP12-202ENST00000612674 ILDR1Q86SU0 546 aaPredicted RBP14.5□□□□□ -0.09
USP12-202ENST00000612674 L3MBTL3Q96JM7 780 aaPredicted RBP14.5□□□□□ -0.09
USP12-202ENST00000612674 TMEM121BQ9BXQ6 578 aaPredicted RBP14.49□□□□□ -0.09
USP12-202ENST00000612674 C3orf67Q6ZVT6 689 aa14.48□□□□□ -0.09
USP12-202ENST00000612674 DPY19L2Q6NUT2 758 aa14.44□□□□□ -0.1
USP12-202ENST00000612674 CABP2Q9NPB3 220 aa14.44□□□□□ -0.1
USP12-202ENST00000612674 MARVELD3Q96A59 401 aa14.43□□□□□ -0.1
USP12-202ENST00000612674 BOLA1Q9Y3E2 137 aa14.32□□□□□ -0.12
USP12-202ENST00000612674 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
USP12-202ENST00000612674 EMP3P54852 163 aa14.28□□□□□ -0.12
USP12-202ENST00000612674 SPNS2Q8IVW8 549 aa14.27□□□□□ -0.13
USP12-202ENST00000612674 EFCAB3Q8N7B9 438 aa14.27□□□□□ -0.13
USP12-202ENST00000612674 POTEB3A0JP26 581 aa14.25□□□□□ -0.13
USP12-202ENST00000612674 G3V3G9 751 aa14.25□□□□□ -0.13
USP12-202ENST00000612674 POTEBQ6S5H4 581 aa14.25□□□□□ -0.13
USP12-202ENST00000612674 ABCC9O60706 1549 aa14.25□□□□□ -0.13
USP12-202ENST00000612674 MMRN1Q13201 1228 aa14.23□□□□□ -0.13
USP12-202ENST00000612674 HOXB3P14651 431 aaPredicted RBP14.22□□□□□ -0.13
USP12-202ENST00000612674 HS3ST6Q96QI5 342 aa14.21□□□□□ -0.13
USP12-202ENST00000612674 RNF25Q96BH1 459 aaPredicted RBP14.2□□□□□ -0.14
USP12-202ENST00000612674 FAM205CA6NFA0 338 aa14.19□□□□□ -0.14
USP12-202ENST00000612674 RIOK3O14730 519 aaKnown RBP14.15□□□□□ -0.14
USP12-202ENST00000612674 KRTAP3-3Q9BYR6 98 aa14.15□□□□□ -0.14
USP12-202ENST00000612674 KRTAP3-2Q9BYR7 98 aa14.15□□□□□ -0.14
USP12-202ENST00000612674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.12□□□□□ -0.15
USP12-202ENST00000612674 ZFP91Q96JP5 570 aaPredicted RBP14.12□□□□□ -0.15
USP12-202ENST00000612674 HOXB1P14653 301 aaPredicted RBP14.1□□□□□ -0.15
USP12-202ENST00000612674 SOX12O15370 315 aa14.09□□□□□ -0.15
USP12-202ENST00000612674 TMEM92Q6UXU6 159 aa14.09□□□□□ -0.15
USP12-202ENST00000612674 MICALL2Q8IY33 904 aa14.09□□□□□ -0.15
USP12-202ENST00000612674 MS4A4AQ96JQ5 239 aa14.09□□□□□ -0.15
USP12-202ENST00000612674 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
USP12-202ENST00000612674 DOK7Q18PE1 504 aa14.08□□□□□ -0.16
USP12-202ENST00000612674 ZNF710Q8N1W2 664 aa14.08□□□□□ -0.16
USP12-202ENST00000612674 PHF8Q9UPP1 1060 aa14.05□□□□□ -0.16
USP12-202ENST00000612674 ERBB3P21860 1342 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms