RNA–Protein interactions for RNA: ENST00000602540.5

PHLDA1-202, Transcript of pleckstrin homology like domain family A member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHLDA1, Length 5,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA1-202ENST00000602540 DDRGK1Q96HY6 314 aa24.68■■□□□ 1.54
PHLDA1-202ENST00000602540 PPP1R15AO75807 674 aaPredicted RBP24.66■■□□□ 1.54
PHLDA1-202ENST00000602540 NCLP19338 710 aaKnown RBP24.66■■□□□ 1.54
PHLDA1-202ENST00000602540 ZBTB7CA1YPR0 619 aa24.65■■□□□ 1.54
PHLDA1-202ENST00000602540 CLIP1P30622 1438 aa24.64■■□□□ 1.54
PHLDA1-202ENST00000602540 MIER1Q8N108 512 aa24.63■■□□□ 1.53
PHLDA1-202ENST00000602540 C14orf37Q86TY3 774 aa24.63■■□□□ 1.53
PHLDA1-202ENST00000602540 RRP7BPQ9NSQ0 103 aa24.62■■□□□ 1.53
PHLDA1-202ENST00000602540 HIRIP3Q9BW71 556 aaPredicted RBP24.62■■□□□ 1.53
PHLDA1-202ENST00000602540 RSF1Q96T23 1441 aaPredicted RBP24.59■■□□□ 1.53
PHLDA1-202ENST00000602540 ANP32EQ9BTT0 268 aa24.59■■□□□ 1.53
PHLDA1-202ENST00000602540 CFAP53Q96M91 514 aa24.58■■□□□ 1.53
PHLDA1-202ENST00000602540 GOLGA6L22H0YM25 854 aa24.58■■□□□ 1.52
PHLDA1-202ENST00000602540 ZCCHC6Q5VYS8 1495 aaKnown RBP24.54■■□□□ 1.52
PHLDA1-202ENST00000602540 CDCA8Q53HL2 280 aa24.54■■□□□ 1.52
PHLDA1-202ENST00000602540 PLEKHD1A6NEE1 506 aa24.53■■□□□ 1.52
PHLDA1-202ENST00000602540 TRIM44Q96DX7 344 aaPredicted RBP24.53■■□□□ 1.52
PHLDA1-202ENST00000602540 KCNH8Q96L42 1107 aa24.51■■□□□ 1.51
PHLDA1-202ENST00000602540 PLEKHG5O94827 1062 aa24.51■■□□□ 1.51
PHLDA1-202ENST00000602540 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
PHLDA1-202ENST00000602540 CASC1Q6TDU7 716 aa24.48■■□□□ 1.51
PHLDA1-202ENST00000602540 KNSTRNQ9Y448 316 aa24.48■■□□□ 1.51
PHLDA1-202ENST00000602540 RGL3Q3MIN7 710 aa24.47■■□□□ 1.51
PHLDA1-202ENST00000602540 ZRSR1Q15695 479 aaKnown RBP24.43■■□□□ 1.5
PHLDA1-202ENST00000602540 GOLGA3Q08378 1498 aa24.42■■□□□ 1.5
PHLDA1-202ENST00000602540 HAP1P54257 671 aaPredicted RBP24.41■■□□□ 1.5
PHLDA1-202ENST00000602540 FTSJ3Q8IY81 847 aaKnown RBP24.41■■□□□ 1.5
PHLDA1-202ENST00000602540 EEA1Q15075 1411 aa24.41■■□□□ 1.5
PHLDA1-202ENST00000602540 PPM1GO15355 546 aaPredicted RBP24.37■■□□□ 1.49
PHLDA1-202ENST00000602540 CARD11Q9BXL7 1154 aa24.36■■□□□ 1.49
PHLDA1-202ENST00000602540 CFDP1Q9UEE9 299 aaPredicted RBP24.36■■□□□ 1.49
PHLDA1-202ENST00000602540 MAPK8IP3Q9UPT6 1336 aa24.35■■□□□ 1.49
PHLDA1-202ENST00000602540 PTMAP06454 111 aaKnown RBP24.35■■□□□ 1.49
PHLDA1-202ENST00000602540 CEP162Q5TB80 1403 aa24.33■■□□□ 1.48
PHLDA1-202ENST00000602540 ARID4BQ4LE39 1312 aaPredicted RBP24.33■■□□□ 1.48
PHLDA1-202ENST00000602540 NUDCQ9Y266 331 aa24.32■■□□□ 1.48
PHLDA1-202ENST00000602540 LAS1LQ9Y4W2 734 aaKnown RBP24.28■■□□□ 1.48
PHLDA1-202ENST00000602540 SUPT16HQ9Y5B9 1047 aaKnown RBP24.27■■□□□ 1.48
PHLDA1-202ENST00000602540 CHMP4BQ9H444 224 aaKnown RBP24.26■■□□□ 1.47
PHLDA1-202ENST00000602540 NEUROD2Q15784 382 aa24.26■■□□□ 1.47
PHLDA1-202ENST00000602540 POGKQ9P215 609 aa24.24■■□□□ 1.47
PHLDA1-202ENST00000602540 SENP3-EIF4A1A0A087X0R7 540 aa24.23■■□□□ 1.47
PHLDA1-202ENST00000602540 DNTTIP2Q5QJE6 756 aaKnown RBP24.22■■□□□ 1.47
PHLDA1-202ENST00000602540 TNNT2P45379 298 aaPredicted RBP24.21■■□□□ 1.47
PHLDA1-202ENST00000602540 MS4A1P11836 297 aa24.2■■□□□ 1.46
PHLDA1-202ENST00000602540 TPRNQ4KMQ1 711 aa24.19■■□□□ 1.46
PHLDA1-202ENST00000602540 PPP4R2Q9NY27 417 aa24.18■■□□□ 1.46
PHLDA1-202ENST00000602540 KIF27Q86VH2 1401 aa24.18■■□□□ 1.46
PHLDA1-202ENST00000602540 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
PHLDA1-202ENST00000602540 FRAT1Q92837 279 aaPredicted RBP24.17■■□□□ 1.46
PHLDA1-202ENST00000602540 PNNQ9H307 717 aaKnown RBP24.16■■□□□ 1.46
PHLDA1-202ENST00000602540 RGS3P49796 1198 aa24.15■■□□□ 1.46
PHLDA1-202ENST00000602540 CCDC180Q9P1Z9 1646 aa24.15■■□□□ 1.46
PHLDA1-202ENST00000602540 ERICH6BQ5W0A0 696 aa24.14■■□□□ 1.46
PHLDA1-202ENST00000602540 LMOD2Q6P5Q4 547 aa24.14■■□□□ 1.45
PHLDA1-202ENST00000602540 OS9Q13438 667 aaPredicted RBP24.13■■□□□ 1.45
PHLDA1-202ENST00000602540 RB1CC1Q8TDY2 1594 aa24.12■■□□□ 1.45
PHLDA1-202ENST00000602540 CEP164Q9UPV0 1460 aa24.12■■□□□ 1.45
PHLDA1-202ENST00000602540 TNIKQ9UKE5 1360 aa24.11■■□□□ 1.45
PHLDA1-202ENST00000602540 GOLGA6L6A8MZA4 724 aa24.11■■□□□ 1.45
PHLDA1-202ENST00000602540 HSP90AB1P08238 724 aaKnown RBP24.1■■□□□ 1.45
PHLDA1-202ENST00000602540 TULP1O00294 542 aaPredicted RBP24.09■■□□□ 1.45
PHLDA1-202ENST00000602540 CC2D1BQ5T0F9 858 aaKnown RBP24.09■■□□□ 1.45
PHLDA1-202ENST00000602540 NPHP1O15259 732 aa24.09■■□□□ 1.45
PHLDA1-202ENST00000602540 FGD1P98174 961 aa24.09■■□□□ 1.45
PHLDA1-202ENST00000602540 U2SURPO15042 1029 aaKnown RBP24.09■■□□□ 1.45
PHLDA1-202ENST00000602540 PLCB2Q00722 1185 aa24.05■■□□□ 1.44
PHLDA1-202ENST00000602540 KCNJ4P48050 445 aa24.05■■□□□ 1.44
PHLDA1-202ENST00000602540 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
PHLDA1-202ENST00000602540 TMF1P82094 1093 aa24.05■■□□□ 1.44
PHLDA1-202ENST00000602540 SIN3AQ96ST3 1273 aa24.05■■□□□ 1.44
PHLDA1-202ENST00000602540 NOP58Q9Y2X3 529 aaKnown RBP24.03■■□□□ 1.44
PHLDA1-202ENST00000602540 CCNB3Q8WWL7 1395 aa24.02■■□□□ 1.44
PHLDA1-202ENST00000602540 NRDCO43847 1150 aa24.01■■□□□ 1.43
PHLDA1-202ENST00000602540 TAOK2Q9UL54 1235 aa24.01■■□□□ 1.43
PHLDA1-202ENST00000602540 NAP1L5Q96NT1 182 aaPredicted RBP24■■□□□ 1.43
PHLDA1-202ENST00000602540 KANK1Q14678 1352 aa24■■□□□ 1.43
PHLDA1-202ENST00000602540 GOLGA2Q08379 1002 aa23.99■■□□□ 1.43
PHLDA1-202ENST00000602540 NAP1L2Q9ULW6 460 aaPredicted RBP23.98■■□□□ 1.43
PHLDA1-202ENST00000602540 HSCBQ8IWL3 235 aa23.96■■□□□ 1.43
PHLDA1-202ENST00000602540 HDGFP51858 240 aaKnown RBP23.96■■□□□ 1.43
PHLDA1-202ENST00000602540 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.42
PHLDA1-202ENST00000602540 GOLGA6L4A6NEF3 574 aa23.95■■□□□ 1.42
PHLDA1-202ENST00000602540 DCAF11Q8TEB1 546 aa23.95■■□□□ 1.42
PHLDA1-202ENST00000602540 MCCP23508 829 aa23.93■■□□□ 1.42
PHLDA1-202ENST00000602540 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
PHLDA1-202ENST00000602540 CFAP44Q96MT7 982 aa23.91■■□□□ 1.42
PHLDA1-202ENST00000602540 B4GALNT3Q6L9W6 998 aa23.89■■□□□ 1.42
PHLDA1-202ENST00000602540 SRPK2P78362 688 aaKnown RBP23.89■■□□□ 1.42
PHLDA1-202ENST00000602540 MORC1Q86VD1 984 aa23.89■■□□□ 1.42
PHLDA1-202ENST00000602540 ERCC6Q03468 1493 aa23.89■■□□□ 1.42
PHLDA1-202ENST00000602540 TIMELESSQ9UNS1 1208 aa23.88■■□□□ 1.41
PHLDA1-202ENST00000602540 CHAF1AQ13111 956 aaPredicted RBP23.84■■□□□ 1.41
PHLDA1-202ENST00000602540 RTF1Q92541 710 aaKnown RBP23.83■■□□□ 1.4
PHLDA1-202ENST00000602540 CCER2I3L3R5 266 aa23.81■■□□□ 1.4
PHLDA1-202ENST00000602540 L1TD1Q5T7N2 865 aaKnown RBP23.81■■□□□ 1.4
PHLDA1-202ENST00000602540 SOX12O15370 315 aa23.81■■□□□ 1.4
PHLDA1-202ENST00000602540 RTN4Q9NQC3 1192 aaKnown RBP23.8■■□□□ 1.4
PHLDA1-202ENST00000602540 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
PHLDA1-202ENST00000602540 IPO8O15397 1037 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms