RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 HSP90AA1P07900 732 aaKnown RBP16.25■□□□□ 0.19
PTPN23-206ENST00000602307 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
PTPN23-206ENST00000602307 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
PTPN23-206ENST00000602307 EIF4G2P78344 907 aaKnown RBP eCLIP16.21■□□□□ 0.19
PTPN23-206ENST00000602307 KCNH8Q96L42 1107 aa16.21■□□□□ 0.19
PTPN23-206ENST00000602307 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
PTPN23-206ENST00000602307 UPF2Q9HAU5 1272 aaKnown RBP16.2■□□□□ 0.18
PTPN23-206ENST00000602307 EEA1Q15075 1411 aa16.19■□□□□ 0.18
PTPN23-206ENST00000602307 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
PTPN23-206ENST00000602307 BAZ1BQ9UIG0 1483 aaKnown RBP16.17■□□□□ 0.18
PTPN23-206ENST00000602307 RGL3Q3MIN7 710 aa16.17■□□□□ 0.18
PTPN23-206ENST00000602307 GOLGA3Q08378 1498 aa16.17■□□□□ 0.18
PTPN23-206ENST00000602307 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.16■□□□□ 0.18
PTPN23-206ENST00000602307 NBR1Q14596 966 aa16.16■□□□□ 0.18
PTPN23-206ENST00000602307 PLEKHD1A6NEE1 506 aa16.12■□□□□ 0.17
PTPN23-206ENST00000602307 WIZO95785 1651 aa16.11■□□□□ 0.17
PTPN23-206ENST00000602307 TNIKQ9UKE5 1360 aa16.1■□□□□ 0.17
PTPN23-206ENST00000602307 EIF5BO60841 1220 aaKnown RBP16.09■□□□□ 0.17
PTPN23-206ENST00000602307 PLEKHG5O94827 1062 aa16.09■□□□□ 0.17
PTPN23-206ENST00000602307 ARXQ96QS3 562 aa16.08■□□□□ 0.17
PTPN23-206ENST00000602307 ANP32BQ92688 251 aaKnown RBP16.08■□□□□ 0.16
PTPN23-206ENST00000602307 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
PTPN23-206ENST00000602307 SIN3AQ96ST3 1273 aa16.07■□□□□ 0.16
PTPN23-206ENST00000602307 CFDP1Q9UEE9 299 aaPredicted RBP16.06■□□□□ 0.16
PTPN23-206ENST00000602307 ABCC8Q09428 1581 aa16.05■□□□□ 0.16
PTPN23-206ENST00000602307 SOGA1O94964 1423 aa16.04■□□□□ 0.16
PTPN23-206ENST00000602307 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
PTPN23-206ENST00000602307 KIF27Q86VH2 1401 aa16.01■□□□□ 0.15
PTPN23-206ENST00000602307 PPP1R15AO75807 674 aaPredicted RBP16■□□□□ 0.15
PTPN23-206ENST00000602307 ZBTB7CA1YPR0 619 aa16■□□□□ 0.15
PTPN23-206ENST00000602307 TOP2AP11388 1531 aaKnown RBP15.99■□□□□ 0.15
PTPN23-206ENST00000602307 SUPT16HQ9Y5B9 1047 aaKnown RBP15.99■□□□□ 0.15
PTPN23-206ENST00000602307 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
PTPN23-206ENST00000602307 C14orf37Q86TY3 774 aa15.98■□□□□ 0.15
PTPN23-206ENST00000602307 A0A0G2JS52 829 aa15.95■□□□□ 0.14
PTPN23-206ENST00000602307 KNSTRNQ9Y448 316 aa15.94■□□□□ 0.14
PTPN23-206ENST00000602307 PPM1GO15355 546 aaPredicted RBP15.94■□□□□ 0.14
PTPN23-206ENST00000602307 GLIPR1L2Q4G1C9 344 aa15.94■□□□□ 0.14
PTPN23-206ENST00000602307 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
PTPN23-206ENST00000602307 NEUROD2Q15784 382 aa15.93■□□□□ 0.14
PTPN23-206ENST00000602307 ANP32EQ9BTT0 268 aa15.9■□□□□ 0.14
PTPN23-206ENST00000602307 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
PTPN23-206ENST00000602307 CFAP53Q96M91 514 aa15.87■□□□□ 0.13
PTPN23-206ENST00000602307 CDCA8Q53HL2 280 aa15.86■□□□□ 0.13
PTPN23-206ENST00000602307 TNNT2P45379 298 aaPredicted RBP15.86■□□□□ 0.13
PTPN23-206ENST00000602307 ARID4BQ4LE39 1312 aaPredicted RBP15.86■□□□□ 0.13
PTPN23-206ENST00000602307 SMARCA2P51531 1590 aa15.86■□□□□ 0.13
PTPN23-206ENST00000602307 CCNB3Q8WWL7 1395 aa15.84■□□□□ 0.13
PTPN23-206ENST00000602307 CC2D1BQ5T0F9 858 aaKnown RBP15.84■□□□□ 0.13
PTPN23-206ENST00000602307 LAS1LQ9Y4W2 734 aaKnown RBP15.82■□□□□ 0.12
PTPN23-206ENST00000602307 CARMIL1Q5VZK9 1371 aa15.81■□□□□ 0.12
PTPN23-206ENST00000602307 DCAF11Q8TEB1 546 aa15.81■□□□□ 0.12
PTPN23-206ENST00000602307 BECN1Q14457 450 aa15.8■□□□□ 0.12
PTPN23-206ENST00000602307 FTSJ3Q8IY81 847 aaKnown RBP15.79■□□□□ 0.12
PTPN23-206ENST00000602307 FRAT1Q92837 279 aaPredicted RBP15.79■□□□□ 0.12
PTPN23-206ENST00000602307 RGS3P49796 1198 aa15.78■□□□□ 0.12
PTPN23-206ENST00000602307 POGKQ9P215 609 aa15.78■□□□□ 0.12
PTPN23-206ENST00000602307 DDRGK1Q96HY6 314 aa15.78■□□□□ 0.12
PTPN23-206ENST00000602307 KANK4Q5T7N3 995 aaPredicted RBP15.78■□□□□ 0.12
PTPN23-206ENST00000602307 CUX2O14529 1486 aa15.77■□□□□ 0.11
PTPN23-206ENST00000602307 B4GALNT3Q6L9W6 998 aa15.76■□□□□ 0.11
PTPN23-206ENST00000602307 MAPK8IP3Q9UPT6 1336 aa15.75■□□□□ 0.11
PTPN23-206ENST00000602307 PPP4R2Q9NY27 417 aa15.75■□□□□ 0.11
PTPN23-206ENST00000602307 FOXD1Q16676 465 aa15.75■□□□□ 0.11
PTPN23-206ENST00000602307 VPS8Q8N3P4 1428 aa15.74■□□□□ 0.11
PTPN23-206ENST00000602307 U2SURPO15042 1029 aaKnown RBP15.74■□□□□ 0.11
PTPN23-206ENST00000602307 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
PTPN23-206ENST00000602307 LMOD2Q6P5Q4 547 aa15.73■□□□□ 0.11
PTPN23-206ENST00000602307 NUDCQ9Y266 331 aa15.73■□□□□ 0.11
PTPN23-206ENST00000602307 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
PTPN23-206ENST00000602307 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
PTPN23-206ENST00000602307 HAP1P54257 671 aaPredicted RBP15.71■□□□□ 0.11
PTPN23-206ENST00000602307 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.1
PTPN23-206ENST00000602307 NCLP19338 710 aaKnown RBP15.7■□□□□ 0.1
PTPN23-206ENST00000602307 TPRNQ4KMQ1 711 aa15.7■□□□□ 0.1
PTPN23-206ENST00000602307 HSPA5P11021 654 aaKnown RBP15.69■□□□□ 0.1
PTPN23-206ENST00000602307 TMF1P82094 1093 aa15.69■□□□□ 0.1
PTPN23-206ENST00000602307 RUSC2Q8N2Y8 1516 aa15.69■□□□□ 0.1
PTPN23-206ENST00000602307 SAFB2Q14151 953 aaKnown RBP eCLIP15.68■□□□□ 0.1
PTPN23-206ENST00000602307 RBM19Q9Y4C8 960 aaKnown RBP15.67■□□□□ 0.1
PTPN23-206ENST00000602307 GOLGA6L22H0YM25 854 aa15.67■□□□□ 0.1
PTPN23-206ENST00000602307 PKD2Q13563 968 aa15.67■□□□□ 0.1
PTPN23-206ENST00000602307 MLECQ14165 292 aa15.67■□□□□ 0.1
PTPN23-206ENST00000602307 SETD5Q9C0A6 1442 aa15.66■□□□□ 0.1
PTPN23-206ENST00000602307 SOX12O15370 315 aa15.65■□□□□ 0.1
PTPN23-206ENST00000602307 TIMELESSQ9UNS1 1208 aa15.65■□□□□ 0.1
PTPN23-206ENST00000602307 TRIM44Q96DX7 344 aaPredicted RBP15.64■□□□□ 0.09
PTPN23-206ENST00000602307 GGT6Q6P531 493 aa15.62■□□□□ 0.09
PTPN23-206ENST00000602307 SRPK2P78362 688 aaKnown RBP15.62■□□□□ 0.09
PTPN23-206ENST00000602307 CASC1Q6TDU7 716 aa15.61■□□□□ 0.09
PTPN23-206ENST00000602307 RAPGEF2Q9Y4G8 1499 aa15.61■□□□□ 0.09
PTPN23-206ENST00000602307 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
PTPN23-206ENST00000602307 CCER2I3L3R5 266 aa15.6■□□□□ 0.09
PTPN23-206ENST00000602307 MORC1Q86VD1 984 aa15.59■□□□□ 0.09
PTPN23-206ENST00000602307 TSHZ2Q9NRE2 1034 aa15.59■□□□□ 0.09
PTPN23-206ENST00000602307 NOP58Q9Y2X3 529 aaKnown RBP15.59■□□□□ 0.09
PTPN23-206ENST00000602307 STK26Q9P289 416 aa15.59■□□□□ 0.09
PTPN23-206ENST00000602307 ARHGAP35Q9NRY4 1499 aa15.58■□□□□ 0.09
PTPN23-206ENST00000602307 RTN4Q9NQC3 1192 aaKnown RBP15.58■□□□□ 0.08
PTPN23-206ENST00000602307 RAB3GAP2Q9H2M9 1393 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms