RNA–Protein interactions for RNA: ENST00000599004.1

C19orf48-211, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 5

Gene C19orf48, Length 866 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-211ENST00000599004 ABCC10Q5T3U5 1492 aa21.56■■□□□ 1.04
C19orf48-211ENST00000599004 NPM1P06748 294 aaKnown RBP eCLIP21.54■■□□□ 1.04
C19orf48-211ENST00000599004 MAPKBP1O60336 1514 aa21.5■■□□□ 1.03
C19orf48-211ENST00000599004 DIP2BQ9P265 1576 aa21.48■■□□□ 1.03
C19orf48-211ENST00000599004 RUSC2Q8N2Y8 1516 aa21.47■■□□□ 1.03
C19orf48-211ENST00000599004 KDM4FA0A1W2PPD8 638 aa21.46■■□□□ 1.03
C19orf48-211ENST00000599004 KDM6BO15054 1643 aa21.45■■□□□ 1.02
C19orf48-211ENST00000599004 ADCY10Q96PN6 1610 aa21.44■■□□□ 1.02
C19orf48-211ENST00000599004 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
C19orf48-211ENST00000599004 TSPOAP1O95153 1857 aa21.4■■□□□ 1.02
C19orf48-211ENST00000599004 ILDR1Q86SU0 546 aaPredicted RBP21.35■■□□□ 1.01
C19orf48-211ENST00000599004 KIAA0586Q9BVV6 1533 aa21.3■■□□□ 1
C19orf48-211ENST00000599004 PTPRGP23470 1445 aa21.22■□□□□ 0.99
C19orf48-211ENST00000599004 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
C19orf48-211ENST00000599004 CUL7Q14999 1698 aa21.19■□□□□ 0.98
C19orf48-211ENST00000599004 IGF1RP08069 1367 aa21.19■□□□□ 0.98
C19orf48-211ENST00000599004 ADGRL1O94910 1474 aa21.18■□□□□ 0.98
C19orf48-211ENST00000599004 ABCC2Q92887 1545 aa21.17■□□□□ 0.98
C19orf48-211ENST00000599004 PPRC1Q5VV67 1664 aaKnown RBP21.15■□□□□ 0.98
C19orf48-211ENST00000599004 PLB1Q6P1J6 1458 aa21.15■□□□□ 0.98
C19orf48-211ENST00000599004 ASXL2Q76L83 1435 aa21.15■□□□□ 0.98
C19orf48-211ENST00000599004 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
C19orf48-211ENST00000599004 GLI2P10070 1586 aa21.14■□□□□ 0.98
C19orf48-211ENST00000599004 TNIKQ9UKE5 1360 aa21.13■□□□□ 0.97
C19orf48-211ENST00000599004 CARMIL2Q6F5E8 1435 aa21.12■□□□□ 0.97
C19orf48-211ENST00000599004 UHRF1BP1LA0JNW5 1464 aa21.07■□□□□ 0.96
C19orf48-211ENST00000599004 CARMIL1Q5VZK9 1371 aa21.05■□□□□ 0.96
C19orf48-211ENST00000599004 COL17A1Q9UMD9 1497 aaPredicted RBP21.05■□□□□ 0.96
C19orf48-211ENST00000599004 HECW2Q9P2P5 1572 aa21.05■□□□□ 0.96
C19orf48-211ENST00000599004 UACAQ9BZF9 1416 aa21.04■□□□□ 0.96
C19orf48-211ENST00000599004 IQGAP2Q13576 1575 aa21.03■□□□□ 0.96
C19orf48-211ENST00000599004 MAP3K4Q9Y6R4 1608 aa21.02■□□□□ 0.96
C19orf48-211ENST00000599004 EPRSP07814 1512 aaKnown RBP21.02■□□□□ 0.96
C19orf48-211ENST00000599004 TEX14Q8IWB6 1497 aa21.01■□□□□ 0.95
C19orf48-211ENST00000599004 KDM5BQ9UGL1 1544 aa20.98■□□□□ 0.95
C19orf48-211ENST00000599004 DISP1Q96F81 1524 aa20.96■□□□□ 0.95
C19orf48-211ENST00000599004 ZCCHC11Q5TAX3 1644 aaKnown RBP20.94■□□□□ 0.94
C19orf48-211ENST00000599004 UGGT2Q9NYU1 1516 aa20.87■□□□□ 0.93
C19orf48-211ENST00000599004 WDR7Q9Y4E6 1490 aa20.86■□□□□ 0.93
C19orf48-211ENST00000599004 KIAA0556O60303 1618 aa20.85■□□□□ 0.93
C19orf48-211ENST00000599004 RAPGEF2Q9Y4G8 1499 aa20.8■□□□□ 0.92
C19orf48-211ENST00000599004 CD109Q6YHK3 1445 aa20.79■□□□□ 0.92
C19orf48-211ENST00000599004 MAGI3Q5TCQ9 1506 aa20.79■□□□□ 0.92
C19orf48-211ENST00000599004 CFAP43Q8NDM7 1665 aa20.78■□□□□ 0.92
C19orf48-211ENST00000599004 FBXO41Q8TF61 875 aa20.76■□□□□ 0.91
C19orf48-211ENST00000599004 KCNH8Q96L42 1107 aa20.76■□□□□ 0.91
C19orf48-211ENST00000599004 KIF21BO75037 1637 aa20.75■□□□□ 0.91
C19orf48-211ENST00000599004 ABCA8O94911 1581 aa20.68■□□□□ 0.9
C19orf48-211ENST00000599004 GOLGA3Q08378 1498 aa20.67■□□□□ 0.9
C19orf48-211ENST00000599004 CTTNBP2Q8WZ74 1663 aa20.67■□□□□ 0.9
C19orf48-211ENST00000599004 ARAP3Q8WWN8 1544 aa20.64■□□□□ 0.9
C19orf48-211ENST00000599004 PTPRMP28827 1452 aa20.62■□□□□ 0.89
C19orf48-211ENST00000599004 ADAMTSL3P82987 1691 aa20.6■□□□□ 0.89
C19orf48-211ENST00000599004 ARID3CA6NKF2 412 aa20.55■□□□□ 0.88
C19orf48-211ENST00000599004 PHLDB1Q86UU1 1377 aa20.55■□□□□ 0.88
C19orf48-211ENST00000599004 FAM9AQ8IZU1 332 aaPredicted RBP20.53■□□□□ 0.88
C19orf48-211ENST00000599004 RAPGEF3O95398 923 aa20.52■□□□□ 0.88
C19orf48-211ENST00000599004 ABCA9Q8IUA7 1624 aa20.52■□□□□ 0.88
C19orf48-211ENST00000599004 PCF11O94913 1555 aaKnown RBP20.51■□□□□ 0.87
C19orf48-211ENST00000599004 ATP10BO94823 1461 aa20.51■□□□□ 0.87
C19orf48-211ENST00000599004 BCORL1Q5H9F3 1711 aa20.5■□□□□ 0.87
C19orf48-211ENST00000599004 ARID4BQ4LE39 1312 aaPredicted RBP20.5■□□□□ 0.87
C19orf48-211ENST00000599004 MADDQ8WXG6 1647 aa20.49■□□□□ 0.87
C19orf48-211ENST00000599004 NEO1Q92859 1461 aa20.47■□□□□ 0.87
C19orf48-211ENST00000599004 LMTK3Q96Q04 1460 aa20.47■□□□□ 0.87
C19orf48-211ENST00000599004 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
C19orf48-211ENST00000599004 PRXQ9BXM0 1461 aa20.44■□□□□ 0.86
C19orf48-211ENST00000599004 FRMPD1Q5SYB0 1578 aa20.43■□□□□ 0.86
C19orf48-211ENST00000599004 RIMS1Q86UR5 1692 aaKnown RBP20.41■□□□□ 0.86
C19orf48-211ENST00000599004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.39■□□□□ 0.85
C19orf48-211ENST00000599004 HNRNPUL2Q1KMD3 747 aaKnown RBP20.39■□□□□ 0.85
C19orf48-211ENST00000599004 ARHGEF40Q8TER5 1519 aa20.37■□□□□ 0.85
C19orf48-211ENST00000599004 HSPA2P54652 639 aa20.37■□□□□ 0.85
C19orf48-211ENST00000599004 RAPGEF6Q8TEU7 1601 aa20.37■□□□□ 0.85
C19orf48-211ENST00000599004 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
C19orf48-211ENST00000599004 DENND4BO75064 1496 aaPredicted RBP20.33■□□□□ 0.85
C19orf48-211ENST00000599004 SAMD9Q5K651 1589 aa20.33■□□□□ 0.84
C19orf48-211ENST00000599004 RICTORQ6R327 1708 aa20.32■□□□□ 0.84
C19orf48-211ENST00000599004 POGZQ7Z3K3 1410 aa20.31■□□□□ 0.84
C19orf48-211ENST00000599004 CERKQ8TCT0 537 aa20.31■□□□□ 0.84
C19orf48-211ENST00000599004 FANCAO15360 1455 aa20.3■□□□□ 0.84
C19orf48-211ENST00000599004 NUP153P49790 1475 aaKnown RBP20.29■□□□□ 0.84
C19orf48-211ENST00000599004 FHOD3Q2V2M9 1422 aa20.28■□□□□ 0.84
C19orf48-211ENST00000599004 AKNAQ7Z591 1439 aa20.28■□□□□ 0.84
C19orf48-211ENST00000599004 CFAP74Q9C0B2 1584 aa20.26■□□□□ 0.83
C19orf48-211ENST00000599004 PLEKHD1A6NEE1 506 aa20.25■□□□□ 0.83
C19orf48-211ENST00000599004 ZMYM4Q5VZL5 1548 aa20.24■□□□□ 0.83
C19orf48-211ENST00000599004 ZFYVE16Q7Z3T8 1539 aa20.24■□□□□ 0.83
C19orf48-211ENST00000599004 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
C19orf48-211ENST00000599004 SIGLEC1Q9BZZ2 1709 aa20.23■□□□□ 0.83
C19orf48-211ENST00000599004 YEATS2Q9ULM3 1422 aa20.22■□□□□ 0.83
C19orf48-211ENST00000599004 MLECQ14165 292 aa20.22■□□□□ 0.83
C19orf48-211ENST00000599004 FER1L4A9Z1Z3 1794 aa20.21■□□□□ 0.83
C19orf48-211ENST00000599004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.21■□□□□ 0.83not detected■■□□□ 13.5
C19orf48-211ENST00000599004 MAGI2Q86UL8 1455 aa20.19■□□□□ 0.82
C19orf48-211ENST00000599004 RANGAP1P46060 587 aaPredicted RBP20.19■□□□□ 0.82
C19orf48-211ENST00000599004 TTC37Q6PGP7 1564 aa20.19■□□□□ 0.82
C19orf48-211ENST00000599004 DISP3Q9P2K9 1392 aa20.18■□□□□ 0.82
C19orf48-211ENST00000599004 HECW1Q76N89 1606 aa20.16■□□□□ 0.82
C19orf48-211ENST00000599004 CSRNP3Q8WYN3 585 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms