RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 CLCN6P51797 869 aa16.12■□□□□ 0.17
LINC00343-206ENST00000598478 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC00343-206ENST00000598478 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
LINC00343-206ENST00000598478 ZCCHC6Q5VYS8 1495 aaKnown RBP16.07■□□□□ 0.16
LINC00343-206ENST00000598478 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
LINC00343-206ENST00000598478 PAK3O75914 559 aaPredicted RBP16.04■□□□□ 0.16
LINC00343-206ENST00000598478 POTEIP0CG38 1075 aa16.03■□□□□ 0.16
LINC00343-206ENST00000598478 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
LINC00343-206ENST00000598478 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
LINC00343-206ENST00000598478 DCBLD2Q96PD2 775 aa15.96■□□□□ 0.15
LINC00343-206ENST00000598478 PHF12Q96QT6 1004 aa15.94■□□□□ 0.14
LINC00343-206ENST00000598478 LHX8Q68G74 356 aa15.93■□□□□ 0.14
LINC00343-206ENST00000598478 GALR2O43603 387 aaPredicted RBP15.92■□□□□ 0.14
LINC00343-206ENST00000598478 MIER1Q8N108 512 aa15.85■□□□□ 0.13
LINC00343-206ENST00000598478 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
LINC00343-206ENST00000598478 FKBP8Q14318 412 aa15.84■□□□□ 0.13
LINC00343-206ENST00000598478 TSPYL2Q9H2G4 693 aaPredicted RBP15.8■□□□□ 0.12
LINC00343-206ENST00000598478 NESP48681 1621 aa15.76■□□□□ 0.11
LINC00343-206ENST00000598478 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
LINC00343-206ENST00000598478 MS4A3Q96HJ5 214 aa15.73■□□□□ 0.11
LINC00343-206ENST00000598478 CCDC61Q9Y6R9 512 aa15.71■□□□□ 0.11
LINC00343-206ENST00000598478 NCAPD3P42695 1498 aa15.7■□□□□ 0.1
LINC00343-206ENST00000598478 THOC2Q8NI27 1593 aaKnown RBP15.67■□□□□ 0.1
LINC00343-206ENST00000598478 RASEFQ8IZ41 740 aa15.67■□□□□ 0.1
LINC00343-206ENST00000598478 KIF12Q96FN5 646 aa15.62■□□□□ 0.09
LINC00343-206ENST00000598478 PELP1Q8IZL8 1130 aaKnown RBP15.61■□□□□ 0.09
LINC00343-206ENST00000598478 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
LINC00343-206ENST00000598478 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
LINC00343-206ENST00000598478 ASTLQ6HA08 431 aaPredicted RBP15.59■□□□□ 0.09
LINC00343-206ENST00000598478 ATMINO43313 823 aaPredicted RBP15.57■□□□□ 0.08
LINC00343-206ENST00000598478 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
LINC00343-206ENST00000598478 MAP3K13O43283 966 aa15.53■□□□□ 0.08
LINC00343-206ENST00000598478 NUBP1P53384 320 aa15.53■□□□□ 0.08
LINC00343-206ENST00000598478 KIF21AQ7Z4S6 1674 aa15.52■□□□□ 0.08
LINC00343-206ENST00000598478 HMGXB3Q12766 1538 aa15.52■□□□□ 0.07
LINC00343-206ENST00000598478 POTEB2H3BUK9 544 aa15.5■□□□□ 0.07
LINC00343-206ENST00000598478 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
LINC00343-206ENST00000598478 METRNQ9UJH8 293 aa15.49■□□□□ 0.07
LINC00343-206ENST00000598478 SLC39A7Q92504 469 aa15.48■□□□□ 0.07
LINC00343-206ENST00000598478 TRPC6Q9Y210 931 aa15.47■□□□□ 0.07
LINC00343-206ENST00000598478 C7P10643 843 aa15.46■□□□□ 0.07
LINC00343-206ENST00000598478 ATN1P54259 1190 aaPredicted RBP15.46■□□□□ 0.07
LINC00343-206ENST00000598478 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
LINC00343-206ENST00000598478 BMP2KQ9NSY1 1161 aaPredicted RBP15.44■□□□□ 0.06
LINC00343-206ENST00000598478 FAM212AQ96EL1 285 aa15.43■□□□□ 0.06
LINC00343-206ENST00000598478 OTUD5Q96G74 571 aa15.43■□□□□ 0.06
LINC00343-206ENST00000598478 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
LINC00343-206ENST00000598478 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
LINC00343-206ENST00000598478 TIE1P35590 1138 aa15.4■□□□□ 0.06
LINC00343-206ENST00000598478 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
LINC00343-206ENST00000598478 PCDHB13Q9Y5F0 798 aa15.39■□□□□ 0.05
LINC00343-206ENST00000598478 SGIP1Q9BQI5 828 aa15.38■□□□□ 0.05
LINC00343-206ENST00000598478 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
LINC00343-206ENST00000598478 TTLL13PA6NNM8 815 aa15.33■□□□□ 0.04
LINC00343-206ENST00000598478 VASPP50552 380 aaPredicted RBP15.33■□□□□ 0.04
LINC00343-206ENST00000598478 DCAF8Q5TAQ9 597 aa15.3■□□□□ 0.04
LINC00343-206ENST00000598478 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
LINC00343-206ENST00000598478 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
LINC00343-206ENST00000598478 WDR62O43379 1518 aa15.29■□□□□ 0.04
LINC00343-206ENST00000598478 POTEJP0CG39 1038 aa15.29■□□□□ 0.04
LINC00343-206ENST00000598478 KLHL34Q8N239 644 aa15.26■□□□□ 0.03
LINC00343-206ENST00000598478 RIMBP3CA6NJZ7 1639 aa15.25■□□□□ 0.03
LINC00343-206ENST00000598478 RIMBP3BA6NNM3 1639 aa15.25■□□□□ 0.03
LINC00343-206ENST00000598478 RIMBP3Q9UFD9 1639 aa15.25■□□□□ 0.03
LINC00343-206ENST00000598478 POTEFA5A3E0 1075 aa15.25■□□□□ 0.03
LINC00343-206ENST00000598478 MAMSTRQ6ZN01 415 aa15.23■□□□□ 0.03
LINC00343-206ENST00000598478 TRIM35Q9UPQ4 493 aa15.23■□□□□ 0.03
LINC00343-206ENST00000598478 PEG3Q9GZU2 1588 aa15.23■□□□□ 0.03
LINC00343-206ENST00000598478 PYGBP11216 843 aa15.21■□□□□ 0.03
LINC00343-206ENST00000598478 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.02
LINC00343-206ENST00000598478 TMEM106CQ9BVX2 250 aa15.19■□□□□ 0.02
LINC00343-206ENST00000598478 SEC24BO95487 1268 aa15.18■□□□□ 0.02
LINC00343-206ENST00000598478 COLQQ9Y215 455 aaPredicted RBP15.18■□□□□ 0.02
LINC00343-206ENST00000598478 IER5LQ5T953 404 aa15.17■□□□□ 0.02
LINC00343-206ENST00000598478 SCUBE2Q9NQ36 999 aa15.16■□□□□ 0.02
LINC00343-206ENST00000598478 GSE1Q14687 1217 aa15.13■□□□□ 0.01
LINC00343-206ENST00000598478 MROH2BQ7Z745 1585 aa15.12■□□□□ 0.01
LINC00343-206ENST00000598478 CEP164Q9UPV0 1460 aa15.12■□□□□ 0.01
LINC00343-206ENST00000598478 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
LINC00343-206ENST00000598478 PCDHB8Q9UN66 801 aa15.11■□□□□ 0.01
LINC00343-206ENST00000598478 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
LINC00343-206ENST00000598478 FANCD2Q9BXW9 1451 aa15.06■□□□□ 0
LINC00343-206ENST00000598478 IFNLR1Q8IU57 520 aaPredicted RBP15.04■□□□□ -0
LINC00343-206ENST00000598478 PLCG2P16885 1265 aa15.01□□□□□ -0.01
LINC00343-206ENST00000598478 SPOCK2Q92563 424 aa15.01□□□□□ -0.01
LINC00343-206ENST00000598478 CHRM1P11229 460 aaPredicted RBP15□□□□□ -0.01
LINC00343-206ENST00000598478 ZNF467Q7Z7K2 595 aaPredicted RBP15□□□□□ -0.01
LINC00343-206ENST00000598478 URB2Q14146 1524 aaKnown RBP15□□□□□ -0.01
LINC00343-206ENST00000598478 IRX5P78411 483 aaPredicted RBP14.99□□□□□ -0.01
LINC00343-206ENST00000598478 POTEMA6NI47 508 aa14.98□□□□□ -0.01
LINC00343-206ENST00000598478 POTEGQ6S5H5 508 aa14.96□□□□□ -0.01
LINC00343-206ENST00000598478 ZNF608Q9ULD9 1512 aaPredicted RBP14.94□□□□□ -0.02
LINC00343-206ENST00000598478 FAM163AQ96GL9 167 aaPredicted RBP14.93□□□□□ -0.02
LINC00343-206ENST00000598478 OCEL1Q9H607 264 aa14.93□□□□□ -0.02
LINC00343-206ENST00000598478 CIZ1Q9ULV3 898 aaPredicted RBP14.93□□□□□ -0.02
LINC00343-206ENST00000598478 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
LINC00343-206ENST00000598478 WIZO95785 1651 aa14.93□□□□□ -0.02
LINC00343-206ENST00000598478 LCE2DQ5TA82 110 aaPredicted RBP14.9□□□□□ -0.02
LINC00343-206ENST00000598478 CFTRP13569 1480 aa14.89□□□□□ -0.03
LINC00343-206ENST00000598478 PSEN1P49768 467 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms