RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 CEP162Q5TB80 1403 aa10.56□□□□□ -0.72
FARP1-219ENST00000596580 TNIKQ9UKE5 1360 aa10.56□□□□□ -0.72
FARP1-219ENST00000596580 TIMELESSQ9UNS1 1208 aa10.56□□□□□ -0.72
FARP1-219ENST00000596580 CDK11BP21127 795 aaKnown RBP10.55□□□□□ -0.72
FARP1-219ENST00000596580 CASC1Q6TDU7 716 aa10.55□□□□□ -0.72
FARP1-219ENST00000596580 CHMP7Q8WUX9 453 aaPredicted RBP10.55□□□□□ -0.72
FARP1-219ENST00000596580 P3H3Q8IVL6 736 aa10.54□□□□□ -0.72
FARP1-219ENST00000596580 CFAP53Q96M91 514 aa10.54□□□□□ -0.72
FARP1-219ENST00000596580 ARID4BQ4LE39 1312 aaPredicted RBP10.54□□□□□ -0.72
FARP1-219ENST00000596580 MS4A1P11836 297 aa10.54□□□□□ -0.72
FARP1-219ENST00000596580 MRS2Q9HD23 443 aa10.54□□□□□ -0.72
FARP1-219ENST00000596580 CFAP44Q96MT7 982 aa10.53□□□□□ -0.72
FARP1-219ENST00000596580 NPM2Q86SE8 214 aaKnown RBP10.53□□□□□ -0.72
FARP1-219ENST00000596580 FKBP8Q14318 412 aa10.51□□□□□ -0.73
FARP1-219ENST00000596580 NCLP19338 710 aaKnown RBP10.51□□□□□ -0.73
FARP1-219ENST00000596580 PNNQ9H307 717 aaKnown RBP10.51□□□□□ -0.73
FARP1-219ENST00000596580 HAP1P54257 671 aaPredicted RBP10.5□□□□□ -0.73
FARP1-219ENST00000596580 PLEKHD1A6NEE1 506 aa10.5□□□□□ -0.73
FARP1-219ENST00000596580 CHGAP10645 457 aaKnown RBP10.47□□□□□ -0.73
FARP1-219ENST00000596580 FAM9BQ8IZU0 186 aa10.46□□□□□ -0.73
FARP1-219ENST00000596580 KANK1Q14678 1352 aa10.46□□□□□ -0.73
FARP1-219ENST00000596580 DDX10Q13206 875 aaKnown RBP10.46□□□□□ -0.74
FARP1-219ENST00000596580 KNSTRNQ9Y448 316 aa10.46□□□□□ -0.74
FARP1-219ENST00000596580 ZRSR1Q15695 479 aaKnown RBP10.45□□□□□ -0.74
FARP1-219ENST00000596580 TRIM44Q96DX7 344 aaPredicted RBP10.44□□□□□ -0.74
FARP1-219ENST00000596580 NRDCO43847 1150 aa10.44□□□□□ -0.74
FARP1-219ENST00000596580 TNNT2P45379 298 aaPredicted RBP10.44□□□□□ -0.74
FARP1-219ENST00000596580 CHMP4AQ9BY43 222 aa10.43□□□□□ -0.74
FARP1-219ENST00000596580 NUDCQ9Y266 331 aa10.43□□□□□ -0.74
FARP1-219ENST00000596580 GOLGA6L6A8MZA4 724 aa10.42□□□□□ -0.74
FARP1-219ENST00000596580 PPM1GO15355 546 aaPredicted RBP10.42□□□□□ -0.74
FARP1-219ENST00000596580 FMN1Q68DA7 1419 aa10.42□□□□□ -0.74
FARP1-219ENST00000596580 PPP1R15AO75807 674 aaPredicted RBP10.41□□□□□ -0.74
FARP1-219ENST00000596580 ERICH6BQ5W0A0 696 aa10.41□□□□□ -0.74
FARP1-219ENST00000596580 ERCC6Q03468 1493 aa10.41□□□□□ -0.74
FARP1-219ENST00000596580 ARID3CA6NKF2 412 aa10.41□□□□□ -0.74
FARP1-219ENST00000596580 ARHGAP35Q9NRY4 1499 aa10.4□□□□□ -0.74
FARP1-219ENST00000596580 HDGFP51858 240 aaKnown RBP10.4□□□□□ -0.74
FARP1-219ENST00000596580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.4□□□□□ -0.755e-12■■□□□ 11.9
FARP1-219ENST00000596580 CFDP1Q9UEE9 299 aaPredicted RBP10.39□□□□□ -0.75
FARP1-219ENST00000596580 CCNB3Q8WWL7 1395 aa10.39□□□□□ -0.75
FARP1-219ENST00000596580 FTSJ3Q8IY81 847 aaKnown RBP10.39□□□□□ -0.75
FARP1-219ENST00000596580 PTMSP20962 102 aa10.38□□□□□ -0.75
FARP1-219ENST00000596580 EIF3AQ14152 1382 aaKnown RBP10.38□□□□□ -0.75
FARP1-219ENST00000596580 MAPK8IP3Q9UPT6 1336 aa10.37□□□□□ -0.75
FARP1-219ENST00000596580 BCL11AQ9H165 835 aa10.36□□□□□ -0.75
FARP1-219ENST00000596580 CHIC2Q9UKJ5 165 aa10.36□□□□□ -0.75
FARP1-219ENST00000596580 CARMIL2Q6F5E8 1435 aa10.36□□□□□ -0.75
FARP1-219ENST00000596580 VPS8Q8N3P4 1428 aa10.35□□□□□ -0.75
FARP1-219ENST00000596580 TOP2AP11388 1531 aaKnown RBP10.35□□□□□ -0.75
FARP1-219ENST00000596580 L1TD1Q5T7N2 865 aaKnown RBP10.34□□□□□ -0.75
FARP1-219ENST00000596580 CALD1Q05682 793 aaKnown RBP10.33□□□□□ -0.76
FARP1-219ENST00000596580 ABCC8Q09428 1581 aa10.32□□□□□ -0.76
FARP1-219ENST00000596580 PDS5BQ9NTI5 1447 aa10.32□□□□□ -0.76
FARP1-219ENST00000596580 CARD11Q9BXL7 1154 aa10.32□□□□□ -0.76
FARP1-219ENST00000596580 ROCK2O75116 1388 aaKnown RBP10.32□□□□□ -0.76
FARP1-219ENST00000596580 CCER2I3L3R5 266 aa10.32□□□□□ -0.76
FARP1-219ENST00000596580 PHLDB1Q86UU1 1377 aa10.31□□□□□ -0.76
FARP1-219ENST00000596580 CHAF1AQ13111 956 aaPredicted RBP10.3□□□□□ -0.76
FARP1-219ENST00000596580 KDM2AQ9Y2K7 1162 aa10.3□□□□□ -0.76
FARP1-219ENST00000596580 PPP4R2Q9NY27 417 aa10.3□□□□□ -0.76
FARP1-219ENST00000596580 TMF1P82094 1093 aa10.3□□□□□ -0.76
FARP1-219ENST00000596580 MCCP23508 829 aa10.3□□□□□ -0.76
FARP1-219ENST00000596580 HDAC5Q9UQL6 1122 aa10.29□□□□□ -0.76
FARP1-219ENST00000596580 SETD5Q9C0A6 1442 aa10.29□□□□□ -0.76
FARP1-219ENST00000596580 CCDC18Q5T9S5 1454 aa10.29□□□□□ -0.76
FARP1-219ENST00000596580 RRP7BPQ9NSQ0 103 aa10.28□□□□□ -0.76
FARP1-219ENST00000596580 C14orf37Q86TY3 774 aa10.28□□□□□ -0.76
FARP1-219ENST00000596580 PTMAP06454 111 aaKnown RBP10.28□□□□□ -0.76
FARP1-219ENST00000596580 CARMIL1Q5VZK9 1371 aa10.27□□□□□ -0.76
FARP1-219ENST00000596580 EIF4G1Q04637 1599 aaKnown RBP10.27□□□□□ -0.77
FARP1-219ENST00000596580 RSPH4AQ5TD94 716 aa10.26□□□□□ -0.77
FARP1-219ENST00000596580 CUX2O14529 1486 aa10.26□□□□□ -0.77
FARP1-219ENST00000596580 NBR1Q14596 966 aa10.26□□□□□ -0.77
FARP1-219ENST00000596580 IPO8O15397 1037 aaKnown RBP10.25□□□□□ -0.77
FARP1-219ENST00000596580 MIER1Q8N108 512 aa10.25□□□□□ -0.77
FARP1-219ENST00000596580 KTN1Q86UP2 1357 aaKnown RBP10.24□□□□□ -0.77
FARP1-219ENST00000596580 RALBP1Q15311 655 aa10.24□□□□□ -0.77
FARP1-219ENST00000596580 UACAQ9BZF9 1416 aa10.24□□□□□ -0.77
FARP1-219ENST00000596580 SMARCA4P51532 1647 aa10.23□□□□□ -0.77
FARP1-219ENST00000596580 POGKQ9P215 609 aa10.23□□□□□ -0.77
FARP1-219ENST00000596580 CCDC34Q96HJ3 373 aa10.23□□□□□ -0.77
FARP1-219ENST00000596580 ANKRD30AQ9BXX3 1397 aa10.23□□□□□ -0.77
FARP1-219ENST00000596580 HSCBQ8IWL3 235 aa10.23□□□□□ -0.77
FARP1-219ENST00000596580 USP35Q9P2H5 1018 aa10.22□□□□□ -0.77
FARP1-219ENST00000596580 HTATSF1O43719 755 aaKnown RBP10.22□□□□□ -0.77
FARP1-219ENST00000596580 SCAF1Q9H7N4 1312 aaKnown RBP10.21□□□□□ -0.78
FARP1-219ENST00000596580 SALL2Q9Y467 1007 aaPredicted RBP10.21□□□□□ -0.78
FARP1-219ENST00000596580 CUX1P39880 1505 aa10.2□□□□□ -0.78
FARP1-219ENST00000596580 DNTTIP2Q5QJE6 756 aaKnown RBP10.2□□□□□ -0.78
FARP1-219ENST00000596580 NOP58Q9Y2X3 529 aaKnown RBP10.19□□□□□ -0.78
FARP1-219ENST00000596580 SYAP1Q96A49 352 aaPredicted RBP10.19□□□□□ -0.78
FARP1-219ENST00000596580 FGD1P98174 961 aa10.19□□□□□ -0.78
FARP1-219ENST00000596580 CHMP4CQ96CF2 233 aa10.18□□□□□ -0.78
FARP1-219ENST00000596580 GOLGA2Q08379 1002 aa10.18□□□□□ -0.78
FARP1-219ENST00000596580 GOLGA6L4A6NEF3 574 aa10.18□□□□□ -0.78
FARP1-219ENST00000596580 HSP90AB1P08238 724 aaKnown RBP10.17□□□□□ -0.78
FARP1-219ENST00000596580 GBP4Q96PP9 640 aa10.17□□□□□ -0.78
FARP1-219ENST00000596580 KCNH8Q96L42 1107 aa10.17□□□□□ -0.78
FARP1-219ENST00000596580 PDE3BQ13370 1112 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms