RNA–Protein interactions for RNA: ENST00000595535.5

SPTBN4-207, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 5 BASIC

Gene SPTBN4, Length 6,105 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-207ENST00000595535 ARXQ96QS3 562 aa25.91■■□□□ 1.74
SPTBN4-207ENST00000595535 MYH16Q9H6N6 1097 aa25.9■■□□□ 1.74
SPTBN4-207ENST00000595535 EIF5BO60841 1220 aaKnown RBP25.89■■□□□ 1.74
SPTBN4-207ENST00000595535 IRX6P78412 446 aaPredicted RBP25.88■■□□□ 1.73
SPTBN4-207ENST00000595535 RGL3Q3MIN7 710 aa25.85■■□□□ 1.73
SPTBN4-207ENST00000595535 CCDC180Q9P1Z9 1646 aa25.84■■□□□ 1.73
SPTBN4-207ENST00000595535 HAP1P54257 671 aaPredicted RBP25.83■■□□□ 1.73
SPTBN4-207ENST00000595535 NBR1Q14596 966 aa25.83■■□□□ 1.73
SPTBN4-207ENST00000595535 PLEKHD1A6NEE1 506 aa25.83■■□□□ 1.72
SPTBN4-207ENST00000595535 EIF4G2P78344 907 aaKnown RBP eCLIP25.82■■□□□ 1.72
SPTBN4-207ENST00000595535 CLIP1P30622 1438 aa25.81■■□□□ 1.72
SPTBN4-207ENST00000595535 DCAF1Q9Y4B6 1507 aa25.8■■□□□ 1.72
SPTBN4-207ENST00000595535 RB1CC1Q8TDY2 1594 aa25.79■■□□□ 1.72
SPTBN4-207ENST00000595535 SENP3-EIF4A1A0A087X0R7 540 aa25.71■■□□□ 1.71
SPTBN4-207ENST00000595535 PPM1GO15355 546 aaPredicted RBP25.71■■□□□ 1.71
SPTBN4-207ENST00000595535 MIER1Q8N108 512 aa25.7■■□□□ 1.7
SPTBN4-207ENST00000595535 RSF1Q96T23 1441 aaPredicted RBP25.68■■□□□ 1.7
SPTBN4-207ENST00000595535 CFDP1Q9UEE9 299 aaPredicted RBP25.64■■□□□ 1.69
SPTBN4-207ENST00000595535 LMOD2Q6P5Q4 547 aa25.63■■□□□ 1.69
SPTBN4-207ENST00000595535 CDK11BP21127 795 aaKnown RBP25.63■■□□□ 1.69
SPTBN4-207ENST00000595535 CFAP53Q96M91 514 aa25.63■■□□□ 1.69
SPTBN4-207ENST00000595535 KNSTRNQ9Y448 316 aa25.59■■□□□ 1.69
SPTBN4-207ENST00000595535 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
SPTBN4-207ENST00000595535 CARD11Q9BXL7 1154 aa25.54■■□□□ 1.68
SPTBN4-207ENST00000595535 LAS1LQ9Y4W2 734 aaKnown RBP25.54■■□□□ 1.68
SPTBN4-207ENST00000595535 GOLGA3Q08378 1498 aa25.53■■□□□ 1.68
SPTBN4-207ENST00000595535 CDCA8Q53HL2 280 aa25.53■■□□□ 1.68
SPTBN4-207ENST00000595535 NEUROD2Q15784 382 aa25.53■■□□□ 1.68
SPTBN4-207ENST00000595535 TRHP20396 242 aaPredicted RBP25.51■■□□□ 1.67
SPTBN4-207ENST00000595535 NCLP19338 710 aaKnown RBP25.5■■□□□ 1.67
SPTBN4-207ENST00000595535 POGKQ9P215 609 aa25.49■■□□□ 1.67
SPTBN4-207ENST00000595535 CEP162Q5TB80 1403 aa25.48■■□□□ 1.67
SPTBN4-207ENST00000595535 BECN1Q14457 450 aa25.48■■□□□ 1.67
SPTBN4-207ENST00000595535 FTSJ3Q8IY81 847 aaKnown RBP25.47■■□□□ 1.67
SPTBN4-207ENST00000595535 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
SPTBN4-207ENST00000595535 TNNT2P45379 298 aaPredicted RBP25.44■■□□□ 1.66
SPTBN4-207ENST00000595535 MAPK8IP3Q9UPT6 1336 aa25.44■■□□□ 1.66
SPTBN4-207ENST00000595535 MLECQ14165 292 aa25.43■■□□□ 1.66
SPTBN4-207ENST00000595535 TPRNQ4KMQ1 711 aa25.42■■□□□ 1.66
SPTBN4-207ENST00000595535 DDRGK1Q96HY6 314 aa25.41■■□□□ 1.66
SPTBN4-207ENST00000595535 WRNQ14191 1432 aaPredicted RBP eCLIP25.41■■□□□ 1.66
SPTBN4-207ENST00000595535 NPHP1O15259 732 aa25.39■■□□□ 1.65
SPTBN4-207ENST00000595535 CASC1Q6TDU7 716 aa25.39■■□□□ 1.65
SPTBN4-207ENST00000595535 KIF27Q86VH2 1401 aa25.38■■□□□ 1.65
SPTBN4-207ENST00000595535 EEA1Q15075 1411 aa25.38■■□□□ 1.65
SPTBN4-207ENST00000595535 TULP1O00294 542 aaPredicted RBP25.38■■□□□ 1.65
SPTBN4-207ENST00000595535 NUDCQ9Y266 331 aa25.37■■□□□ 1.65
SPTBN4-207ENST00000595535 NACADO15069 1562 aa25.36■■□□□ 1.65
SPTBN4-207ENST00000595535 GOLGA6L22H0YM25 854 aa25.36■■□□□ 1.65
SPTBN4-207ENST00000595535 CC2D1BQ5T0F9 858 aaKnown RBP25.33■■□□□ 1.65
SPTBN4-207ENST00000595535 TAOK2Q9UL54 1235 aa25.33■■□□□ 1.65
SPTBN4-207ENST00000595535 GLIPR1L2Q4G1C9 344 aa25.32■■□□□ 1.64
SPTBN4-207ENST00000595535 ZRSR1Q15695 479 aaKnown RBP25.31■■□□□ 1.64
SPTBN4-207ENST00000595535 FRAT1Q92837 279 aaPredicted RBP25.31■■□□□ 1.64
SPTBN4-207ENST00000595535 SIN3AQ96ST3 1273 aa25.31■■□□□ 1.64
SPTBN4-207ENST00000595535 SUPT16HQ9Y5B9 1047 aaKnown RBP25.31■■□□□ 1.64
SPTBN4-207ENST00000595535 U2SURPO15042 1029 aaKnown RBP25.3■■□□□ 1.64
SPTBN4-207ENST00000595535 TRIM44Q96DX7 344 aaPredicted RBP25.29■■□□□ 1.64
SPTBN4-207ENST00000595535 SOX12O15370 315 aa25.29■■□□□ 1.64
SPTBN4-207ENST00000595535 EIF4G1Q04637 1599 aaKnown RBP25.25■■□□□ 1.63
SPTBN4-207ENST00000595535 OS9Q13438 667 aaPredicted RBP25.24■■□□□ 1.63
SPTBN4-207ENST00000595535 CCNB3Q8WWL7 1395 aa25.23■■□□□ 1.63
SPTBN4-207ENST00000595535 CEP164Q9UPV0 1460 aa25.22■■□□□ 1.63
SPTBN4-207ENST00000595535 RGS3P49796 1198 aa25.21■■□□□ 1.63
SPTBN4-207ENST00000595535 PTMAP06454 111 aaKnown RBP25.2■■□□□ 1.63
SPTBN4-207ENST00000595535 SAFB2Q14151 953 aaKnown RBP eCLIP25.2■■□□□ 1.63
SPTBN4-207ENST00000595535 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.62
SPTBN4-207ENST00000595535 DCAF11Q8TEB1 546 aa25.19■■□□□ 1.62
SPTBN4-207ENST00000595535 ANP32EQ9BTT0 268 aa25.19■■□□□ 1.62
SPTBN4-207ENST00000595535 TNIKQ9UKE5 1360 aa25.17■■□□□ 1.62
SPTBN4-207ENST00000595535 KANK1Q14678 1352 aa25.15■■□□□ 1.62
SPTBN4-207ENST00000595535 SRPK2P78362 688 aaKnown RBP25.15■■□□□ 1.62
SPTBN4-207ENST00000595535 TMF1P82094 1093 aa25.13■■□□□ 1.61
SPTBN4-207ENST00000595535 FGD1P98174 961 aa25.13■■□□□ 1.61
SPTBN4-207ENST00000595535 GOLGA2Q08379 1002 aa25.12■■□□□ 1.61
SPTBN4-207ENST00000595535 NAP1L2Q9ULW6 460 aaPredicted RBP25.12■■□□□ 1.61
SPTBN4-207ENST00000595535 PNNQ9H307 717 aaKnown RBP25.11■■□□□ 1.61
SPTBN4-207ENST00000595535 GGT6Q6P531 493 aa25.11■■□□□ 1.61
SPTBN4-207ENST00000595535 KCNJ4P48050 445 aa25.1■■□□□ 1.61
SPTBN4-207ENST00000595535 HDGFP51858 240 aaKnown RBP25.09■■□□□ 1.61
SPTBN4-207ENST00000595535 CHMP4BQ9H444 224 aaKnown RBP25.08■■□□□ 1.61
SPTBN4-207ENST00000595535 STK26Q9P289 416 aa25.07■■□□□ 1.6
SPTBN4-207ENST00000595535 DNTTIP2Q5QJE6 756 aaKnown RBP25.06■■□□□ 1.6
SPTBN4-207ENST00000595535 PLCB2Q00722 1185 aa25.06■■□□□ 1.6
SPTBN4-207ENST00000595535 MS4A1P11836 297 aa25.04■■□□□ 1.6
SPTBN4-207ENST00000595535 HSP90AB1P08238 724 aaKnown RBP25.03■■□□□ 1.6
SPTBN4-207ENST00000595535 MORC1Q86VD1 984 aa25.03■■□□□ 1.6
SPTBN4-207ENST00000595535 PPP4R2Q9NY27 417 aa25.02■■□□□ 1.6
SPTBN4-207ENST00000595535 CUX2O14529 1486 aa25■■□□□ 1.59
SPTBN4-207ENST00000595535 CARMIL1Q5VZK9 1371 aa25■■□□□ 1.59
SPTBN4-207ENST00000595535 FHAD1B1AJZ9 1412 aa24.99■■□□□ 1.59
SPTBN4-207ENST00000595535 PAK3O75914 559 aaPredicted RBP24.97■■□□□ 1.59
SPTBN4-207ENST00000595535 BAZ1AQ9NRL2 1556 aaPredicted RBP24.96■■□□□ 1.59
SPTBN4-207ENST00000595535 RTF1Q92541 710 aaKnown RBP24.95■■□□□ 1.58
SPTBN4-207ENST00000595535 B4GALNT3Q6L9W6 998 aa24.93■■□□□ 1.58
SPTBN4-207ENST00000595535 FOXD1Q16676 465 aa24.9■■□□□ 1.58
SPTBN4-207ENST00000595535 PKD2Q13563 968 aa24.89■■□□□ 1.57
SPTBN4-207ENST00000595535 HDGFL2Q7Z4V5 671 aaPredicted RBP24.88■■□□□ 1.57
SPTBN4-207ENST00000595535 ISY1Q9ULR0 285 aaKnown RBP24.88■■□□□ 1.57
SPTBN4-207ENST00000595535 ZNF330Q9Y3S2 320 aaPredicted RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms