RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 ERICH3Q5RHP9 1530 aa23.4■■□□□ 1.34
H3F3B-213ENST00000593254 PRG4Q92954 1404 aaPredicted RBP23.36■■□□□ 1.33
H3F3B-213ENST00000593254 JPH4Q96JJ6 628 aa23.3■■□□□ 1.32
H3F3B-213ENST00000593254 ABCC10Q5T3U5 1492 aa23.3■■□□□ 1.32
H3F3B-213ENST00000593254 MAPKBP1O60336 1514 aa23.26■■□□□ 1.31
H3F3B-213ENST00000593254 RUSC2Q8N2Y8 1516 aa23.25■■□□□ 1.31
H3F3B-213ENST00000593254 FAM69CQ0P6D2 419 aa23.25■■□□□ 1.31
H3F3B-213ENST00000593254 DIP2BQ9P265 1576 aa23.23■■□□□ 1.31
H3F3B-213ENST00000593254 ADCY10Q96PN6 1610 aa23.19■■□□□ 1.3
H3F3B-213ENST00000593254 NPM1P06748 294 aaKnown RBP eCLIP23.16■■□□□ 1.3
H3F3B-213ENST00000593254 KDM4FA0A1W2PPD8 638 aa23.13■■□□□ 1.29
H3F3B-213ENST00000593254 KDM6BO15054 1643 aa23.12■■□□□ 1.29
H3F3B-213ENST00000593254 TSPOAP1O95153 1857 aa23.07■■□□□ 1.28
H3F3B-213ENST00000593254 KIAA0586Q9BVV6 1533 aa23.07■■□□□ 1.28
H3F3B-213ENST00000593254 IGF1RP08069 1367 aa22.99■■□□□ 1.27
H3F3B-213ENST00000593254 CUL7Q14999 1698 aa22.96■■□□□ 1.27
H3F3B-213ENST00000593254 PTPRGP23470 1445 aa22.92■■□□□ 1.26
H3F3B-213ENST00000593254 PPRC1Q5VV67 1664 aaKnown RBP22.91■■□□□ 1.26
H3F3B-213ENST00000593254 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
H3F3B-213ENST00000593254 ILDR1Q86SU0 546 aaPredicted RBP22.9■■□□□ 1.26
H3F3B-213ENST00000593254 ABCC2Q92887 1545 aa22.9■■□□□ 1.26
H3F3B-213ENST00000593254 GLI2P10070 1586 aa22.89■■□□□ 1.25
H3F3B-213ENST00000593254 ASXL2Q76L83 1435 aa22.85■■□□□ 1.25
H3F3B-213ENST00000593254 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
H3F3B-213ENST00000593254 PLB1Q6P1J6 1458 aa22.85■■□□□ 1.25
H3F3B-213ENST00000593254 CARMIL2Q6F5E8 1435 aa22.82■■□□□ 1.24
H3F3B-213ENST00000593254 UHRF1BP1LA0JNW5 1464 aa22.81■■□□□ 1.24
H3F3B-213ENST00000593254 ADGRL1O94910 1474 aa22.81■■□□□ 1.24
H3F3B-213ENST00000593254 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
H3F3B-213ENST00000593254 COL17A1Q9UMD9 1497 aaPredicted RBP22.78■■□□□ 1.24
H3F3B-213ENST00000593254 TTBK1Q5TCY1 1321 aaPredicted RBP22.77■■□□□ 1.24
H3F3B-213ENST00000593254 IQGAP2Q13576 1575 aa22.76■■□□□ 1.23
H3F3B-213ENST00000593254 UACAQ9BZF9 1416 aa22.74■■□□□ 1.23
H3F3B-213ENST00000593254 MAP3K4Q9Y6R4 1608 aa22.74■■□□□ 1.23
H3F3B-213ENST00000593254 EPRSP07814 1512 aaKnown RBP22.73■■□□□ 1.23
H3F3B-213ENST00000593254 DISP1Q96F81 1524 aa22.72■■□□□ 1.23
H3F3B-213ENST00000593254 KDM5BQ9UGL1 1544 aa22.72■■□□□ 1.23
H3F3B-213ENST00000593254 HECW2Q9P2P5 1572 aa22.67■■□□□ 1.22
H3F3B-213ENST00000593254 TEX14Q8IWB6 1497 aa22.66■■□□□ 1.22
H3F3B-213ENST00000593254 ZCCHC11Q5TAX3 1644 aaKnown RBP22.65■■□□□ 1.22
H3F3B-213ENST00000593254 UGGT2Q9NYU1 1516 aa22.63■■□□□ 1.21
H3F3B-213ENST00000593254 KIAA0556O60303 1618 aa22.58■■□□□ 1.21
H3F3B-213ENST00000593254 WDR7Q9Y4E6 1490 aa22.56■■□□□ 1.2
H3F3B-213ENST00000593254 RAPGEF2Q9Y4G8 1499 aa22.55■■□□□ 1.2
H3F3B-213ENST00000593254 MAGI3Q5TCQ9 1506 aa22.5■■□□□ 1.19
H3F3B-213ENST00000593254 CFAP43Q8NDM7 1665 aa22.49■■□□□ 1.19
H3F3B-213ENST00000593254 CD109Q6YHK3 1445 aa22.46■■□□□ 1.19
H3F3B-213ENST00000593254 CTTNBP2Q8WZ74 1663 aa22.42■■□□□ 1.18
H3F3B-213ENST00000593254 ABCA8O94911 1581 aa22.42■■□□□ 1.18
H3F3B-213ENST00000593254 PRXQ9BXM0 1461 aa22.41■■□□□ 1.18
H3F3B-213ENST00000593254 FOXD1Q16676 465 aa22.39■■□□□ 1.17
H3F3B-213ENST00000593254 KIF21BO75037 1637 aa22.38■■□□□ 1.17
H3F3B-213ENST00000593254 GOLGA3Q08378 1498 aa22.36■■□□□ 1.17
H3F3B-213ENST00000593254 KCNH8Q96L42 1107 aa22.36■■□□□ 1.17
H3F3B-213ENST00000593254 ARAP3Q8WWN8 1544 aa22.34■■□□□ 1.17
H3F3B-213ENST00000593254 FBXO41Q8TF61 875 aa22.3■■□□□ 1.16
H3F3B-213ENST00000593254 ADAMTSL3P82987 1691 aa22.27■■□□□ 1.16
H3F3B-213ENST00000593254 EEA1Q15075 1411 aa22.24■■□□□ 1.15
H3F3B-213ENST00000593254 PTPRMP28827 1452 aa22.24■■□□□ 1.15
H3F3B-213ENST00000593254 CSRNP3Q8WYN3 585 aa22.24■■□□□ 1.15
H3F3B-213ENST00000593254 PHLDB1Q86UU1 1377 aa22.23■■□□□ 1.15
H3F3B-213ENST00000593254 ABCA9Q8IUA7 1624 aa22.22■■□□□ 1.15
H3F3B-213ENST00000593254 ATP10BO94823 1461 aa22.21■■□□□ 1.15
H3F3B-213ENST00000593254 BCORL1Q5H9F3 1711 aa22.16■■□□□ 1.14
H3F3B-213ENST00000593254 NEO1Q92859 1461 aa22.15■■□□□ 1.14
H3F3B-213ENST00000593254 RAPGEF3O95398 923 aa22.14■■□□□ 1.13
H3F3B-213ENST00000593254 FRMPD1Q5SYB0 1578 aa22.13■■□□□ 1.13
H3F3B-213ENST00000593254 ARID3CA6NKF2 412 aa22.13■■□□□ 1.13
H3F3B-213ENST00000593254 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
H3F3B-213ENST00000593254 MADDQ8WXG6 1647 aa22.12■■□□□ 1.13
H3F3B-213ENST00000593254 LMTK3Q96Q04 1460 aa22.1■■□□□ 1.13
H3F3B-213ENST00000593254 SAMD9Q5K651 1589 aa22.09■■□□□ 1.13
H3F3B-213ENST00000593254 FAM9AQ8IZU1 332 aaPredicted RBP22.08■■□□□ 1.13
H3F3B-213ENST00000593254 P3H3Q8IVL6 736 aa22.07■■□□□ 1.12
H3F3B-213ENST00000593254 RAPGEF6Q8TEU7 1601 aa22.06■■□□□ 1.12
H3F3B-213ENST00000593254 ARHGEF40Q8TER5 1519 aa22.03■■□□□ 1.12
H3F3B-213ENST00000593254 ARID4BQ4LE39 1312 aaPredicted RBP22.02■■□□□ 1.12
H3F3B-213ENST00000593254 RIMS1Q86UR5 1692 aaKnown RBP22.01■■□□□ 1.11
H3F3B-213ENST00000593254 RICTORQ6R327 1708 aa22■■□□□ 1.11
H3F3B-213ENST00000593254 NUP153P49790 1475 aaKnown RBP21.99■■□□□ 1.11
H3F3B-213ENST00000593254 FHOD3Q2V2M9 1422 aa21.96■■□□□ 1.11
H3F3B-213ENST00000593254 DENND4BO75064 1496 aaPredicted RBP21.96■■□□□ 1.11
H3F3B-213ENST00000593254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
H3F3B-213ENST00000593254 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
H3F3B-213ENST00000593254 AKNAQ7Z591 1439 aa21.93■■□□□ 1.1
H3F3B-213ENST00000593254 SIGLEC1Q9BZZ2 1709 aa21.92■■□□□ 1.1
H3F3B-213ENST00000593254 EFCAB5A4FU69 1503 aa21.91■■□□□ 1.1
H3F3B-213ENST00000593254 ZMYM4Q5VZL5 1548 aa21.91■■□□□ 1.1
H3F3B-213ENST00000593254 HSPA2P54652 639 aa21.91■■□□□ 1.1
H3F3B-213ENST00000593254 CFAP74Q9C0B2 1584 aa21.91■■□□□ 1.1
H3F3B-213ENST00000593254 FANCAO15360 1455 aa21.9■■□□□ 1.1
H3F3B-213ENST00000593254 POGZQ7Z3K3 1410 aa21.89■■□□□ 1.09
H3F3B-213ENST00000593254 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
H3F3B-213ENST00000593254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.88■■□□□ 1.096e-11■■■□□ 18.3
H3F3B-213ENST00000593254 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
H3F3B-213ENST00000593254 YEATS2Q9ULM3 1422 aa21.86■■□□□ 1.09
H3F3B-213ENST00000593254 ZFYVE16Q7Z3T8 1539 aa21.85■■□□□ 1.09
H3F3B-213ENST00000593254 MAGI2Q86UL8 1455 aa21.85■■□□□ 1.09
H3F3B-213ENST00000593254 TTC37Q6PGP7 1564 aa21.85■■□□□ 1.09
H3F3B-213ENST00000593254 CERKQ8TCT0 537 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms