RNA–Protein interactions for RNA: ENST00000593098.5

PIK3C3-215, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, human

TSL 2

Gene PIK3C3, Length 3,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIK3C3-215	ENST00000593098	TRIM41	Q8WV44	630 aa		4.83	□□□□□ -1.64
PIK3C3-215	ENST00000593098	HS6ST3	Q8IZP7	471 aa		4.82	□□□□□ -1.64
PIK3C3-215	ENST00000593098	DCAF1	Q9Y4B6	1507 aa		4.82	□□□□□ -1.64
PIK3C3-215	ENST00000593098	FARP1	Q9Y4F1	1045 aa	Predicted RBP	4.8	□□□□□ -1.64
PIK3C3-215	ENST00000593098	BBX	Q8WY36	941 aa	Predicted RBP	4.78	□□□□□ -1.64
PIK3C3-215	ENST00000593098	ZBTB47	Q9UFB7	747 aa	Predicted RBP	4.78	□□□□□ -1.64
PIK3C3-215	ENST00000593098	PLCB2	Q00722	1185 aa		4.77	□□□□□ -1.65
PIK3C3-215	ENST00000593098	CC2D2A	Q9P2K1	1620 aa		4.76	□□□□□ -1.65
PIK3C3-215	ENST00000593098	CHRDL2	Q6WN34	429 aa		4.76	□□□□□ -1.65
PIK3C3-215	ENST00000593098	GSE1	Q14687	1217 aa		4.76	□□□□□ -1.65
PIK3C3-215	ENST00000593098	ZNF579	Q8NAF0	562 aa	Known RBP	4.75	□□□□□ -1.65
PIK3C3-215	ENST00000593098	PRR29	P0C7W0	189 aa		4.75	□□□□□ -1.65
PIK3C3-215	ENST00000593098	GTPBP6	O43824	516 aa	Predicted RBP	4.74	□□□□□ -1.65
PIK3C3-215	ENST00000593098	FBXO22	Q8NEZ5	403 aa		4.74	□□□□□ -1.65
PIK3C3-215	ENST00000593098	KIF12	Q96FN5	646 aa		4.74	□□□□□ -1.65
PIK3C3-215	ENST00000593098	POTEH	Q6S545	545 aa		4.72	□□□□□ -1.65
PIK3C3-215	ENST00000593098	RIOK3	O14730	519 aa	Known RBP	4.72	□□□□□ -1.65
PIK3C3-215	ENST00000593098	KDM2A	Q9Y2K7	1162 aa		4.72	□□□□□ -1.65
PIK3C3-215	ENST00000593098	THOC2	Q8NI27	1593 aa	Known RBP	4.72	□□□□□ -1.65
PIK3C3-215	ENST00000593098	MIER1	Q8N108	512 aa		4.71	□□□□□ -1.66
PIK3C3-215	ENST00000593098	EVX2	Q03828	476 aa		4.7	□□□□□ -1.66
PIK3C3-215	ENST00000593098	EIF4G1	Q04637	1599 aa	Known RBP	4.7	□□□□□ -1.66
PIK3C3-215	ENST00000593098	SLC24A1	O60721	1099 aa		4.7	□□□□□ -1.66
PIK3C3-215	ENST00000593098	ECM2	O94769	699 aa	Predicted RBP	4.68	□□□□□ -1.66
PIK3C3-215	ENST00000593098	PRKAR2A	P13861	404 aa	Known RBP	4.68	□□□□□ -1.66
PIK3C3-215	ENST00000593098	CHADL	Q6NUI6	762 aa		4.68	□□□□□ -1.66
PIK3C3-215	ENST00000593098	MS4A4A	Q96JQ5	239 aa		4.67	□□□□□ -1.66
PIK3C3-215	ENST00000593098	CLCN6	P51797	869 aa		4.67	□□□□□ -1.66
PIK3C3-215	ENST00000593098	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	4.66	□□□□□ -1.66
PIK3C3-215	ENST00000593098	MFRP	Q9BY79	579 aa		4.66	□□□□□ -1.66
PIK3C3-215	ENST00000593098	VGF	O15240	615 aa	Predicted RBP	4.66	□□□□□ -1.66
PIK3C3-215	ENST00000593098	IFNL1	Q8IU54	200 aa		4.66	□□□□□ -1.66
PIK3C3-215	ENST00000593098	ARIH1	Q9Y4X5	557 aa	Predicted RBP	4.66	□□□□□ -1.66
PIK3C3-215	ENST00000593098	ASTL	Q6HA08	431 aa	Predicted RBP	4.65	□□□□□ -1.66
PIK3C3-215	ENST00000593098	PLCD3	Q8N3E9	789 aa		4.65	□□□□□ -1.67
PIK3C3-215	ENST00000593098	VSIG10	Q8N0Z9	540 aa		4.64	□□□□□ -1.67
PIK3C3-215	ENST00000593098	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	4.63	□□□□□ -1.67
PIK3C3-215	ENST00000593098	FAM212A	Q96EL1	285 aa		4.63	□□□□□ -1.67
PIK3C3-215	ENST00000593098	ZFP91	Q96JP5	570 aa	Predicted RBP	4.63	□□□□□ -1.67
PIK3C3-215	ENST00000593098	TRPC6	Q9Y210	931 aa		4.63	□□□□□ -1.67
PIK3C3-215	ENST00000593098	POTEF	A5A3E0	1075 aa		4.62	□□□□□ -1.67
PIK3C3-215	ENST00000593098	MAP3K13	O43283	966 aa		4.62	□□□□□ -1.67
PIK3C3-215	ENST00000593098	MFSD10	Q14728	455 aa		4.62	□□□□□ -1.67
PIK3C3-215	ENST00000593098	PEG3	Q9GZU2	1588 aa		4.61	□□□□□ -1.67
PIK3C3-215	ENST00000593098	KIF3C	O14782	793 aa		4.61	□□□□□ -1.67
PIK3C3-215	ENST00000593098	CADPS2	Q86UW7	1296 aa		4.61	□□□□□ -1.67
PIK3C3-215	ENST00000593098	POTEI	P0CG38	1075 aa		4.61	□□□□□ -1.67
PIK3C3-215	ENST00000593098	CLEC11A	Q9Y240	323 aa		4.6	□□□□□ -1.67
PIK3C3-215	ENST00000593098	IRX5	P78411	483 aa	Predicted RBP	4.59	□□□□□ -1.67
PIK3C3-215	ENST00000593098	PDCD7	Q8N8D1	485 aa	Known RBP	4.59	□□□□□ -1.67
PIK3C3-215	ENST00000593098	PYGB	P11216	843 aa		4.59	□□□□□ -1.67
PIK3C3-215	ENST00000593098	CAMK2B	Q13554	666 aa		4.59	□□□□□ -1.68
PIK3C3-215	ENST00000593098	TIE1	P35590	1138 aa		4.58	□□□□□ -1.68
PIK3C3-215	ENST00000593098	ZNF467	Q7Z7K2	595 aa	Predicted RBP	4.58	□□□□□ -1.68
PIK3C3-215	ENST00000593098	NCKAP5L	Q9HCH0	1330 aa		4.58	□□□□□ -1.68
PIK3C3-215	ENST00000593098	SOX12	O15370	315 aa		4.57	□□□□□ -1.68
PIK3C3-215	ENST00000593098	PDAP1	Q13442	181 aa	Known RBP	4.57	□□□□□ -1.68
PIK3C3-215	ENST00000593098	BMP2K	Q9NSY1	1161 aa	Predicted RBP	4.57	□□□□□ -1.68
PIK3C3-215	ENST00000593098	HMGXB3	Q12766	1538 aa		4.57	□□□□□ -1.68
PIK3C3-215	ENST00000593098	CECR2	Q9BXF3	1484 aa		4.57	□□□□□ -1.68
PIK3C3-215	ENST00000593098	PPP1R37	O75864	691 aa		4.57	□□□□□ -1.68
PIK3C3-215	ENST00000593098	KDM4F	A0A1W2PPD8	638 aa		4.56	□□□□□ -1.68
PIK3C3-215	ENST00000593098	ATMIN	O43313	823 aa	Predicted RBP	4.56	□□□□□ -1.68
PIK3C3-215	ENST00000593098	PHF12	Q96QT6	1004 aa		4.56	□□□□□ -1.68
PIK3C3-215	ENST00000593098	PCDHB8	Q9UN66	801 aa		4.56	□□□□□ -1.68
PIK3C3-215	ENST00000593098	PCDHB13	Q9Y5F0	798 aa		4.56	□□□□□ -1.68
PIK3C3-215	ENST00000593098	CRISPLD2	Q9H0B8	497 aa		4.56	□□□□□ -1.68
PIK3C3-215	ENST00000593098	PLSCR2	Q9NRY7	297 aa		4.56	□□□□□ -1.68
PIK3C3-215	ENST00000593098	KLHL34	Q8N239	644 aa		4.55	□□□□□ -1.68
PIK3C3-215	ENST00000593098	TTLL13P	A6NNM8	815 aa		4.55	□□□□□ -1.68
PIK3C3-215	ENST00000593098	CD44	P16070	742 aa	Known RBP	4.55	□□□□□ -1.68
PIK3C3-215	ENST00000593098	PELP1	Q8IZL8	1130 aa	Known RBP	4.55	□□□□□ -1.68
PIK3C3-215	ENST00000593098	TSHZ2	Q9NRE2	1034 aa		4.55	□□□□□ -1.68
PIK3C3-215	ENST00000593098	MS4A3	Q96HJ5	214 aa		4.55	□□□□□ -1.68
PIK3C3-215	ENST00000593098	PSEN1	P49768	467 aa		4.54	□□□□□ -1.68
PIK3C3-215	ENST00000593098	PRDM2	Q13029	1718 aa		4.54	□□□□□ -1.68
PIK3C3-215	ENST00000593098	PLEKHG5	O94827	1062 aa		4.54	□□□□□ -1.68
PIK3C3-215	ENST00000593098	SMARCA2	P51531	1590 aa		4.54	□□□□□ -1.68
PIK3C3-215	ENST00000593098	DCAF8	Q5TAQ9	597 aa		4.54	□□□□□ -1.68
PIK3C3-215	ENST00000593098	IER5L	Q5T953	404 aa		4.53	□□□□□ -1.68
PIK3C3-215	ENST00000593098	GALR2	O43603	387 aa	Predicted RBP	4.53	□□□□□ -1.68
PIK3C3-215	ENST00000593098	BCL11B	Q9C0K0	894 aa	Predicted RBP	4.53	□□□□□ -1.68
PIK3C3-215	ENST00000593098	POTEJ	P0CG39	1038 aa		4.52	□□□□□ -1.69
PIK3C3-215	ENST00000593098	WDR62	O43379	1518 aa		4.51	□□□□□ -1.69
PIK3C3-215	ENST00000593098	SPRYD3	Q8NCJ5	442 aa		4.51	□□□□□ -1.69
PIK3C3-215	ENST00000593098	TAOK2	Q9UL54	1235 aa		4.51	□□□□□ -1.69
PIK3C3-215	ENST00000593098	CIZ1	Q9ULV3	898 aa	Predicted RBP	4.51	□□□□□ -1.69
PIK3C3-215	ENST00000593098	LAMC3	Q9Y6N6	1575 aa		4.5	□□□□□ -1.69
PIK3C3-215	ENST00000593098	EFCAB3	Q8N7B9	438 aa		4.5	□□□□□ -1.69
PIK3C3-215	ENST00000593098	ZRANB1	Q9UGI0	708 aa		4.5	□□□□□ -1.69
PIK3C3-215	ENST00000593098	GABBR2	O75899	941 aa		4.5	□□□□□ -1.69
PIK3C3-215	ENST00000593098	ATN1	P54259	1190 aa	Predicted RBP	4.5	□□□□□ -1.69
PIK3C3-215	ENST00000593098	CHGA	P10645	457 aa	Known RBP	4.49	□□□□□ -1.69
PIK3C3-215	ENST00000593098	ZCCHC6	Q5VYS8	1495 aa	Known RBP	4.48	□□□□□ -1.69
PIK3C3-215	ENST00000593098	TSPYL2	Q9H2G4	693 aa	Predicted RBP	4.48	□□□□□ -1.69
PIK3C3-215	ENST00000593098	NCAPD3	P42695	1498 aa		4.48	□□□□□ -1.69
PIK3C3-215	ENST00000593098	KIF21A	Q7Z4S6	1674 aa		4.47	□□□□□ -1.69
PIK3C3-215	ENST00000593098	PHF8	Q9UPP1	1060 aa		4.47	□□□□□ -1.69
PIK3C3-215	ENST00000593098	TMEM92	Q6UXU6	159 aa		4.46	□□□□□ -1.69
PIK3C3-215	ENST00000593098	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	4.46	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms