RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 POTEMA6NI47 508 aa11.99□□□□□ -0.49
NPC1-213ENST00000591955 C7P10643 843 aa11.97□□□□□ -0.49
NPC1-213ENST00000591955 PROM2Q8N271 834 aa11.97□□□□□ -0.49
NPC1-213ENST00000591955 SLC39A7Q92504 469 aa11.97□□□□□ -0.49
NPC1-213ENST00000591955 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
NPC1-213ENST00000591955 POTEGQ6S5H5 508 aa11.95□□□□□ -0.5
NPC1-213ENST00000591955 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
NPC1-213ENST00000591955 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
NPC1-213ENST00000591955 MAMSTRQ6ZN01 415 aa11.88□□□□□ -0.51
NPC1-213ENST00000591955 ATN1P54259 1190 aaPredicted RBP11.87□□□□□ -0.51
NPC1-213ENST00000591955 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
NPC1-213ENST00000591955 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
NPC1-213ENST00000591955 BMP2KQ9NSY1 1161 aaPredicted RBP11.81□□□□□ -0.52
NPC1-213ENST00000591955 POTEFA5A3E0 1075 aa11.8□□□□□ -0.52
NPC1-213ENST00000591955 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
NPC1-213ENST00000591955 TRPC6Q9Y210 931 aa11.8□□□□□ -0.52
NPC1-213ENST00000591955 SCUBE2Q9NQ36 999 aa11.79□□□□□ -0.52
NPC1-213ENST00000591955 MAP3K13O43283 966 aa11.77□□□□□ -0.53
NPC1-213ENST00000591955 TIE1P35590 1138 aa11.76□□□□□ -0.53
NPC1-213ENST00000591955 RASEFQ8IZ41 740 aa11.75□□□□□ -0.53
NPC1-213ENST00000591955 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
NPC1-213ENST00000591955 MIER1Q8N108 512 aa11.72□□□□□ -0.53
NPC1-213ENST00000591955 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
NPC1-213ENST00000591955 TTLL13PA6NNM8 815 aa11.68□□□□□ -0.54
NPC1-213ENST00000591955 COLQQ9Y215 455 aaPredicted RBP11.67□□□□□ -0.54
NPC1-213ENST00000591955 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
NPC1-213ENST00000591955 SEC24BO95487 1268 aa11.62□□□□□ -0.55
NPC1-213ENST00000591955 IER5LQ5T953 404 aa11.61□□□□□ -0.55
NPC1-213ENST00000591955 TRIM35Q9UPQ4 493 aa11.6□□□□□ -0.55
NPC1-213ENST00000591955 PCDHB13Q9Y5F0 798 aa11.59□□□□□ -0.55
NPC1-213ENST00000591955 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
NPC1-213ENST00000591955 NUBP1P53384 320 aa11.57□□□□□ -0.56
NPC1-213ENST00000591955 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
NPC1-213ENST00000591955 IFNL1Q8IU54 200 aa11.53□□□□□ -0.56
NPC1-213ENST00000591955 CDAN1Q8IWY9 1227 aa11.49□□□□□ -0.57
NPC1-213ENST00000591955 TMEM106CQ9BVX2 250 aa11.48□□□□□ -0.57
NPC1-213ENST00000591955 SLAIN1Q8ND83 568 aa11.47□□□□□ -0.57
NPC1-213ENST00000591955 FAM212AQ96EL1 285 aa11.47□□□□□ -0.57
NPC1-213ENST00000591955 ST18O60284 1047 aa11.44□□□□□ -0.58
NPC1-213ENST00000591955 IRX5P78411 483 aaPredicted RBP11.44□□□□□ -0.58
NPC1-213ENST00000591955 PLCG2P16885 1265 aa11.43□□□□□ -0.58
NPC1-213ENST00000591955 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
NPC1-213ENST00000591955 PYGBP11216 843 aa11.31□□□□□ -0.6
NPC1-213ENST00000591955 TMEM121BQ9BXQ6 578 aaPredicted RBP11.31□□□□□ -0.6
NPC1-213ENST00000591955 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
NPC1-213ENST00000591955 FKBP8Q14318 412 aa11.29□□□□□ -0.6
NPC1-213ENST00000591955 PCDHB8Q9UN66 801 aa11.29□□□□□ -0.6
NPC1-213ENST00000591955 SNPHO15079 494 aa11.27□□□□□ -0.61
NPC1-213ENST00000591955 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.27□□□□□ -0.61
NPC1-213ENST00000591955 NISCHQ9Y2I1 1504 aa11.26□□□□□ -0.61
NPC1-213ENST00000591955 MMRN1Q13201 1228 aa11.23□□□□□ -0.61
NPC1-213ENST00000591955 SPNS2Q8IVW8 549 aa11.23□□□□□ -0.61
NPC1-213ENST00000591955 PDCD7Q8N8D1 485 aaKnown RBP11.22□□□□□ -0.61
NPC1-213ENST00000591955 MARVELD3Q96A59 401 aa11.2□□□□□ -0.62
NPC1-213ENST00000591955 FBXO3Q9UK99 471 aa11.18□□□□□ -0.62
NPC1-213ENST00000591955 ZNF467Q7Z7K2 595 aaPredicted RBP11.16□□□□□ -0.62
NPC1-213ENST00000591955 GSE1Q14687 1217 aa11.14□□□□□ -0.63
NPC1-213ENST00000591955 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
NPC1-213ENST00000591955 L3MBTL3Q96JM7 780 aaPredicted RBP11.14□□□□□ -0.63
NPC1-213ENST00000591955 CHRM1P11229 460 aaPredicted RBP11.13□□□□□ -0.63
NPC1-213ENST00000591955 MKRN3Q13064 507 aaKnown RBP11.13□□□□□ -0.63
NPC1-213ENST00000591955 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
NPC1-213ENST00000591955 EMP3P54852 163 aa11.09□□□□□ -0.63
NPC1-213ENST00000591955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.63
NPC1-213ENST00000591955 ILDR1Q86SU0 546 aaPredicted RBP11.08□□□□□ -0.64
NPC1-213ENST00000591955 PSEN1P49768 467 aa11.07□□□□□ -0.64
NPC1-213ENST00000591955 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
NPC1-213ENST00000591955 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
NPC1-213ENST00000591955 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
NPC1-213ENST00000591955 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
NPC1-213ENST00000591955 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
NPC1-213ENST00000591955 KRTAP3-3Q9BYR6 98 aa11.04□□□□□ -0.64
NPC1-213ENST00000591955 KRTAP3-2Q9BYR7 98 aa11.04□□□□□ -0.64
NPC1-213ENST00000591955 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
NPC1-213ENST00000591955 PDAP1Q13442 181 aaKnown RBP11□□□□□ -0.65
NPC1-213ENST00000591955 DPY19L2Q6NUT2 758 aa10.99□□□□□ -0.65
NPC1-213ENST00000591955 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
NPC1-213ENST00000591955 BOLA1Q9Y3E2 137 aa10.94□□□□□ -0.66
NPC1-213ENST00000591955 CABP2Q9NPB3 220 aa10.93□□□□□ -0.66
NPC1-213ENST00000591955 G3V3G9 751 aa10.89□□□□□ -0.67
NPC1-213ENST00000591955 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
NPC1-213ENST00000591955 SPOCK2Q92563 424 aa10.87□□□□□ -0.67
NPC1-213ENST00000591955 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
NPC1-213ENST00000591955 CIZ1Q9ULV3 898 aaPredicted RBP10.85□□□□□ -0.67
NPC1-213ENST00000591955 DOK7Q18PE1 504 aa10.84□□□□□ -0.67
NPC1-213ENST00000591955 ZNF710Q8N1W2 664 aa10.84□□□□□ -0.67
NPC1-213ENST00000591955 ERBB3P21860 1342 aa10.81□□□□□ -0.68
NPC1-213ENST00000591955 EFCAB3Q8N7B9 438 aa10.77□□□□□ -0.69
NPC1-213ENST00000591955 RIMBP2O15034 1052 aa10.75□□□□□ -0.69
NPC1-213ENST00000591955 VARS2Q5ST30 1063 aaKnown RBP10.74□□□□□ -0.69
NPC1-213ENST00000591955 RNF166Q96A37 237 aaPredicted RBP10.74□□□□□ -0.69
NPC1-213ENST00000591955 TMEM92Q6UXU6 159 aa10.73□□□□□ -0.69
NPC1-213ENST00000591955 MICALL2Q8IY33 904 aa10.73□□□□□ -0.69
NPC1-213ENST00000591955 ZSWIM6Q9HCJ5 1215 aa10.73□□□□□ -0.69
NPC1-213ENST00000591955 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
NPC1-213ENST00000591955 ZNF687Q8N1G0 1237 aa10.7□□□□□ -0.7
NPC1-213ENST00000591955 ABCC9O60706 1549 aa10.69□□□□□ -0.7
NPC1-213ENST00000591955 GPR153Q6NV75 609 aa10.69□□□□□ -0.7
NPC1-213ENST00000591955 MYT1LQ9UL68 1186 aa10.68□□□□□ -0.7
NPC1-213ENST00000591955 SOX12O15370 315 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms