RNA–Protein interactions for RNA: ENST00000590602.5

TMC6-216, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMC6, Length 5,268 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-216ENST00000590602 SUPT16HQ9Y5B9 1047 aaKnown RBP21.12■□□□□ 0.97
TMC6-216ENST00000590602 SOGA1O94964 1423 aa21.1■□□□□ 0.97
TMC6-216ENST00000590602 SALL2Q9Y467 1007 aaPredicted RBP21.08■□□□□ 0.97
TMC6-216ENST00000590602 ARXQ96QS3 562 aa21.05■□□□□ 0.96
TMC6-216ENST00000590602 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
TMC6-216ENST00000590602 RRP7BPQ9NSQ0 103 aa21■□□□□ 0.95
TMC6-216ENST00000590602 MRS2Q9HD23 443 aa21■□□□□ 0.95
TMC6-216ENST00000590602 ABCC8Q09428 1581 aa20.99■□□□□ 0.95
TMC6-216ENST00000590602 TSPY4P0CV99 314 aa20.96■□□□□ 0.95
TMC6-216ENST00000590602 TSPY10P0CW01 314 aa20.96■□□□□ 0.95
TMC6-216ENST00000590602 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.958e-11■□□□□ 9.7
TMC6-216ENST00000590602 RTN4Q9NQC3 1192 aaKnown RBP20.96■□□□□ 0.95
TMC6-216ENST00000590602 CHGAP10645 457 aaKnown RBP20.94■□□□□ 0.94
TMC6-216ENST00000590602 CHMP7Q8WUX9 453 aaPredicted RBP20.94■□□□□ 0.94
TMC6-216ENST00000590602 TMC1Q8TDI8 760 aa20.94■□□□□ 0.94
TMC6-216ENST00000590602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.91■□□□□ 0.948e-12■■■■■ 26.8
TMC6-216ENST00000590602 WIZO95785 1651 aa20.9■□□□□ 0.94
TMC6-216ENST00000590602 KDM2AQ9Y2K7 1162 aa20.89■□□□□ 0.93
TMC6-216ENST00000590602 VPS8Q8N3P4 1428 aa20.88■□□□□ 0.93
TMC6-216ENST00000590602 ANP32BQ92688 251 aaKnown RBP20.88■□□□□ 0.93
TMC6-216ENST00000590602 PLPPR3Q6T4P5 718 aa20.87■□□□□ 0.93
TMC6-216ENST00000590602 CCNB3Q8WWL7 1395 aa20.87■□□□□ 0.93
TMC6-216ENST00000590602 TOP2AP11388 1531 aaKnown RBP20.86■□□□□ 0.93
TMC6-216ENST00000590602 SENP3-EIF4A1A0A087X0R7 540 aa20.84■□□□□ 0.93
TMC6-216ENST00000590602 HSP90AA1P07900 732 aaKnown RBP20.84■□□□□ 0.93
TMC6-216ENST00000590602 UPF2Q9HAU5 1272 aaKnown RBP20.84■□□□□ 0.93
TMC6-216ENST00000590602 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.92
TMC6-216ENST00000590602 RBM19Q9Y4C8 960 aaKnown RBP20.83■□□□□ 0.92
TMC6-216ENST00000590602 SIN3AQ96ST3 1273 aa20.81■□□□□ 0.92
TMC6-216ENST00000590602 CUX2O14529 1486 aa20.81■□□□□ 0.92
TMC6-216ENST00000590602 CARMIL1Q5VZK9 1371 aa20.81■□□□□ 0.92
TMC6-216ENST00000590602 SMARCA2P51531 1590 aa20.78■□□□□ 0.92
TMC6-216ENST00000590602 DEKP35659 375 aaKnown RBP20.76■□□□□ 0.91
TMC6-216ENST00000590602 NOP58Q9Y2X3 529 aaKnown RBP20.76■□□□□ 0.91
TMC6-216ENST00000590602 PLEKHD1A6NEE1 506 aa20.76■□□□□ 0.91
TMC6-216ENST00000590602 LAS1LQ9Y4W2 734 aaKnown RBP20.76■□□□□ 0.91
TMC6-216ENST00000590602 TSHZ2Q9NRE2 1034 aa20.76■□□□□ 0.91
TMC6-216ENST00000590602 WDR43Q15061 677 aaKnown RBP eCLIP20.73■□□□□ 0.914e-6■■□□□ 14
TMC6-216ENST00000590602 CFDP1Q9UEE9 299 aaPredicted RBP20.72■□□□□ 0.91
TMC6-216ENST00000590602 CDK11BP21127 795 aaKnown RBP20.72■□□□□ 0.91
TMC6-216ENST00000590602 PPP4R2Q9NY27 417 aa20.7■□□□□ 0.9
TMC6-216ENST00000590602 KANK4Q5T7N3 995 aaPredicted RBP20.69■□□□□ 0.9
TMC6-216ENST00000590602 B4GALNT3Q6L9W6 998 aa20.69■□□□□ 0.9
TMC6-216ENST00000590602 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.69■□□□□ 0.9
TMC6-216ENST00000590602 DDRGK1Q96HY6 314 aa20.66■□□□□ 0.9
TMC6-216ENST00000590602 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
TMC6-216ENST00000590602 A0A0G2JS52 829 aa20.66■□□□□ 0.9
TMC6-216ENST00000590602 TIMELESSQ9UNS1 1208 aa20.66■□□□□ 0.9
TMC6-216ENST00000590602 PPM1GO15355 546 aaPredicted RBP20.61■□□□□ 0.89
TMC6-216ENST00000590602 ARHGAP35Q9NRY4 1499 aa20.61■□□□□ 0.89
TMC6-216ENST00000590602 KCNH8Q96L42 1107 aa20.6■□□□□ 0.89
TMC6-216ENST00000590602 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
TMC6-216ENST00000590602 RGL3Q3MIN7 710 aa20.59■□□□□ 0.89
TMC6-216ENST00000590602 EIF4G1Q04637 1599 aaKnown RBP20.59■□□□□ 0.89
TMC6-216ENST00000590602 CARD11Q9BXL7 1154 aa20.58■□□□□ 0.89
TMC6-216ENST00000590602 ERICH6BQ5W0A0 696 aa20.55■□□□□ 0.88
TMC6-216ENST00000590602 C14orf37Q86TY3 774 aa20.54■□□□□ 0.88
TMC6-216ENST00000590602 RAB3GAP2Q9H2M9 1393 aa20.53■□□□□ 0.88
TMC6-216ENST00000590602 TRIM44Q96DX7 344 aaPredicted RBP20.53■□□□□ 0.88
TMC6-216ENST00000590602 RAPGEF2Q9Y4G8 1499 aa20.53■□□□□ 0.88
TMC6-216ENST00000590602 PPP1R15AO75807 674 aaPredicted RBP20.52■□□□□ 0.88
TMC6-216ENST00000590602 HAP1P54257 671 aaPredicted RBP20.52■□□□□ 0.87
TMC6-216ENST00000590602 MYH16Q9H6N6 1097 aa20.51■□□□□ 0.87
TMC6-216ENST00000590602 BECN1Q14457 450 aa20.51■□□□□ 0.87
TMC6-216ENST00000590602 NAP1L5Q96NT1 182 aaPredicted RBP20.5■□□□□ 0.87
TMC6-216ENST00000590602 CCER2I3L3R5 266 aa20.49■□□□□ 0.87
TMC6-216ENST00000590602 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
TMC6-216ENST00000590602 RUSC2Q8N2Y8 1516 aa20.49■□□□□ 0.87
TMC6-216ENST00000590602 FMN1Q68DA7 1419 aa20.46■□□□□ 0.87
TMC6-216ENST00000590602 CDCA8Q53HL2 280 aa20.46■□□□□ 0.87
TMC6-216ENST00000590602 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.46■□□□□ 0.87
TMC6-216ENST00000590602 ERCC6Q03468 1493 aa20.45■□□□□ 0.86
TMC6-216ENST00000590602 KNSTRNQ9Y448 316 aa20.44■□□□□ 0.86
TMC6-216ENST00000590602 HSPA5P11021 654 aaKnown RBP20.4■□□□□ 0.86
TMC6-216ENST00000590602 RGS3P49796 1198 aa20.4■□□□□ 0.86
TMC6-216ENST00000590602 TNNT2P45379 298 aaPredicted RBP20.4■□□□□ 0.86
TMC6-216ENST00000590602 ZBTB7CA1YPR0 619 aa20.39■□□□□ 0.85
TMC6-216ENST00000590602 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
TMC6-216ENST00000590602 TDRD9Q8NDG6 1382 aaKnown RBP20.37■□□□□ 0.85
TMC6-216ENST00000590602 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
TMC6-216ENST00000590602 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
TMC6-216ENST00000590602 ARID4BQ4LE39 1312 aaPredicted RBP20.34■□□□□ 0.85
TMC6-216ENST00000590602 FHOD3Q2V2M9 1422 aa20.34■□□□□ 0.85
TMC6-216ENST00000590602 DHX57Q6P158 1386 aaKnown RBP20.32■□□□□ 0.84
TMC6-216ENST00000590602 FOXD1Q16676 465 aa20.31■□□□□ 0.84
TMC6-216ENST00000590602 NCLP19338 710 aaKnown RBP20.31■□□□□ 0.84
TMC6-216ENST00000590602 CFAP53Q96M91 514 aa20.31■□□□□ 0.84
TMC6-216ENST00000590602 MPHOSPH9Q99550 1183 aa20.31■□□□□ 0.84
TMC6-216ENST00000590602 CC2D1BQ5T0F9 858 aaKnown RBP20.29■□□□□ 0.84
TMC6-216ENST00000590602 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
TMC6-216ENST00000590602 PKD2Q13563 968 aa20.27■□□□□ 0.84
TMC6-216ENST00000590602 GOLGA6L22H0YM25 854 aa20.26■□□□□ 0.83
TMC6-216ENST00000590602 TMF1P82094 1093 aa20.26■□□□□ 0.83
TMC6-216ENST00000590602 CARMIL2Q6F5E8 1435 aa20.23■□□□□ 0.83
TMC6-216ENST00000590602 PLEKHG5O94827 1062 aa20.23■□□□□ 0.83
TMC6-216ENST00000590602 AMER1Q5JTC6 1135 aaPredicted RBP20.22■□□□□ 0.83
TMC6-216ENST00000590602 NPHP1O15259 732 aa20.21■□□□□ 0.83
TMC6-216ENST00000590602 PTMAP06454 111 aaKnown RBP20.2■□□□□ 0.82
TMC6-216ENST00000590602 DNTTIP2Q5QJE6 756 aaKnown RBP20.2■□□□□ 0.82
TMC6-216ENST00000590602 ZRSR1Q15695 479 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 446.3 ms