RNA–Protein interactions for RNA: ENST00000589455.5

LINC01140-209, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-209ENST00000589455 FAM69CQ0P6D2 419 aa28.03■■■□□ 2.08
LINC01140-209ENST00000589455 ABCC10Q5T3U5 1492 aa28.02■■■□□ 2.08
LINC01140-209ENST00000589455 KIF13AQ9H1H9 1805 aa27.97■■■□□ 2.07
LINC01140-209ENST00000589455 MAPKBP1O60336 1514 aa27.95■■■□□ 2.06
LINC01140-209ENST00000589455 RUSC2Q8N2Y8 1516 aa27.92■■■□□ 2.06
LINC01140-209ENST00000589455 KIAA0586Q9BVV6 1533 aa27.89■■■□□ 2.06
LINC01140-209ENST00000589455 IGF1RP08069 1367 aa27.86■■■□□ 2.05
LINC01140-209ENST00000589455 DIP2BQ9P265 1576 aa27.82■■■□□ 2.04
LINC01140-209ENST00000589455 ADCY10Q96PN6 1610 aa27.81■■■□□ 2.04
LINC01140-209ENST00000589455 KIF27Q86VH2 1401 aa27.79■■■□□ 2.04
LINC01140-209ENST00000589455 PTPRGP23470 1445 aa27.73■■■□□ 2.03
LINC01140-209ENST00000589455 KDM4FA0A1W2PPD8 638 aa27.71■■■□□ 2.03
LINC01140-209ENST00000589455 KDM6BO15054 1643 aa27.68■■■□□ 2.02
LINC01140-209ENST00000589455 CUL7Q14999 1698 aa27.68■■■□□ 2.02
LINC01140-209ENST00000589455 CARMIL1Q5VZK9 1371 aa27.64■■■□□ 2.02
LINC01140-209ENST00000589455 CARMIL2Q6F5E8 1435 aa27.64■■■□□ 2.02
LINC01140-209ENST00000589455 TNIKQ9UKE5 1360 aa27.63■■■□□ 2.01
LINC01140-209ENST00000589455 ABCC2Q92887 1545 aa27.59■■■□□ 2.01
LINC01140-209ENST00000589455 PLB1Q6P1J6 1458 aa27.57■■■□□ 2
LINC01140-209ENST00000589455 ASXL2Q76L83 1435 aa27.54■■■□□ 2
LINC01140-209ENST00000589455 UHRF1BP1LA0JNW5 1464 aa27.53■■■□□ 2
LINC01140-209ENST00000589455 TTBK1Q5TCY1 1321 aaPredicted RBP27.53■■■□□ 2
LINC01140-209ENST00000589455 GLI2P10070 1586 aa27.51■■□□□ 1.99
LINC01140-209ENST00000589455 UACAQ9BZF9 1416 aa27.49■■□□□ 1.99
LINC01140-209ENST00000589455 TSPOAP1O95153 1857 aa27.48■■□□□ 1.99
LINC01140-209ENST00000589455 IQGAP2Q13576 1575 aa27.45■■□□□ 1.99
LINC01140-209ENST00000589455 DISP1Q96F81 1524 aa27.4■■□□□ 1.98
LINC01140-209ENST00000589455 KDM5BQ9UGL1 1544 aa27.39■■□□□ 1.98
LINC01140-209ENST00000589455 EPRSP07814 1512 aaKnown RBP27.36■■□□□ 1.97
LINC01140-209ENST00000589455 PPRC1Q5VV67 1664 aaKnown RBP27.33■■□□□ 1.97
LINC01140-209ENST00000589455 TEX14Q8IWB6 1497 aa27.33■■□□□ 1.97
LINC01140-209ENST00000589455 COL17A1Q9UMD9 1497 aaPredicted RBP27.33■■□□□ 1.97
LINC01140-209ENST00000589455 UGGT2Q9NYU1 1516 aa27.32■■□□□ 1.96
LINC01140-209ENST00000589455 ADGRL1O94910 1474 aa27.32■■□□□ 1.96
LINC01140-209ENST00000589455 RAPGEF2Q9Y4G8 1499 aa27.32■■□□□ 1.96
LINC01140-209ENST00000589455 ILDR1Q86SU0 546 aaPredicted RBP27.29■■□□□ 1.96
LINC01140-209ENST00000589455 MAP3K4Q9Y6R4 1608 aa27.25■■□□□ 1.95
LINC01140-209ENST00000589455 WDR7Q9Y4E6 1490 aa27.19■■□□□ 1.94
LINC01140-209ENST00000589455 KIAA0556O60303 1618 aa27.19■■□□□ 1.94
LINC01140-209ENST00000589455 ZCCHC11Q5TAX3 1644 aaKnown RBP27.18■■□□□ 1.94
LINC01140-209ENST00000589455 MAGI3Q5TCQ9 1506 aa27.11■■□□□ 1.93
LINC01140-209ENST00000589455 CD109Q6YHK3 1445 aa27.11■■□□□ 1.93
LINC01140-209ENST00000589455 GOLGA3Q08378 1498 aa27.11■■□□□ 1.93
LINC01140-209ENST00000589455 KCNH8Q96L42 1107 aa27.06■■□□□ 1.92
LINC01140-209ENST00000589455 HECW2Q9P2P5 1572 aa27.04■■□□□ 1.92
LINC01140-209ENST00000589455 ABCA8O94911 1581 aa27.01■■□□□ 1.92
LINC01140-209ENST00000589455 FAM9AQ8IZU1 332 aaPredicted RBP27.01■■□□□ 1.91
LINC01140-209ENST00000589455 CFAP43Q8NDM7 1665 aa26.98■■□□□ 1.91
LINC01140-209ENST00000589455 PRXQ9BXM0 1461 aa26.93■■□□□ 1.9
LINC01140-209ENST00000589455 PHLDB1Q86UU1 1377 aa26.92■■□□□ 1.9
LINC01140-209ENST00000589455 ARAP3Q8WWN8 1544 aa26.91■■□□□ 1.9
LINC01140-209ENST00000589455 CTTNBP2Q8WZ74 1663 aa26.9■■□□□ 1.9
LINC01140-209ENST00000589455 ATP10BO94823 1461 aa26.84■■□□□ 1.89
LINC01140-209ENST00000589455 ARID3CA6NKF2 412 aa26.77■■□□□ 1.88
LINC01140-209ENST00000589455 P3H3Q8IVL6 736 aa26.76■■□□□ 1.87
LINC01140-209ENST00000589455 KIF21BO75037 1637 aa26.74■■□□□ 1.87
LINC01140-209ENST00000589455 NEO1Q92859 1461 aa26.74■■□□□ 1.87
LINC01140-209ENST00000589455 FBXO41Q8TF61 875 aa26.73■■□□□ 1.87
LINC01140-209ENST00000589455 ABCA9Q8IUA7 1624 aa26.72■■□□□ 1.87
LINC01140-209ENST00000589455 RAPGEF3O95398 923 aa26.72■■□□□ 1.87
LINC01140-209ENST00000589455 PTPRMP28827 1452 aa26.71■■□□□ 1.87
LINC01140-209ENST00000589455 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
LINC01140-209ENST00000589455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.66■■□□□ 1.86
LINC01140-209ENST00000589455 HNRNPUL2Q1KMD3 747 aaKnown RBP26.66■■□□□ 1.86
LINC01140-209ENST00000589455 ADAMTSL3P82987 1691 aa26.64■■□□□ 1.86
LINC01140-209ENST00000589455 SAMD9Q5K651 1589 aa26.62■■□□□ 1.85
LINC01140-209ENST00000589455 ARID4BQ4LE39 1312 aaPredicted RBP26.61■■□□□ 1.85
LINC01140-209ENST00000589455 RAPGEF6Q8TEU7 1601 aa26.58■■□□□ 1.85
LINC01140-209ENST00000589455 PLEKHD1A6NEE1 506 aa26.58■■□□□ 1.85
LINC01140-209ENST00000589455 NUP153P49790 1475 aaKnown RBP26.56■■□□□ 1.84
LINC01140-209ENST00000589455 DENND4BO75064 1496 aaPredicted RBP26.53■■□□□ 1.84
LINC01140-209ENST00000589455 FRMPD1Q5SYB0 1578 aa26.52■■□□□ 1.84
LINC01140-209ENST00000589455 BCORL1Q5H9F3 1711 aa26.51■■□□□ 1.83
LINC01140-209ENST00000589455 PCF11O94913 1555 aaKnown RBP26.5■■□□□ 1.83
LINC01140-209ENST00000589455 FHOD3Q2V2M9 1422 aa26.5■■□□□ 1.83
LINC01140-209ENST00000589455 AKNAQ7Z591 1439 aa26.49■■□□□ 1.83
LINC01140-209ENST00000589455 LMTK3Q96Q04 1460 aa26.49■■□□□ 1.83
LINC01140-209ENST00000589455 EEA1Q15075 1411 aa26.47■■□□□ 1.83
LINC01140-209ENST00000589455 MADDQ8WXG6 1647 aa26.46■■□□□ 1.83
LINC01140-209ENST00000589455 FANCAO15360 1455 aa26.45■■□□□ 1.82
LINC01140-209ENST00000589455 POGZQ7Z3K3 1410 aa26.45■■□□□ 1.82
LINC01140-209ENST00000589455 ARHGEF40Q8TER5 1519 aa26.44■■□□□ 1.82
LINC01140-209ENST00000589455 RANGAP1P46060 587 aaPredicted RBP26.41■■□□□ 1.82
LINC01140-209ENST00000589455 MAGI2Q86UL8 1455 aa26.4■■□□□ 1.82
LINC01140-209ENST00000589455 CFAP74Q9C0B2 1584 aa26.37■■□□□ 1.81
LINC01140-209ENST00000589455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.37■■□□□ 1.81
LINC01140-209ENST00000589455 ZMYM4Q5VZL5 1548 aa26.36■■□□□ 1.81
LINC01140-209ENST00000589455 RICTORQ6R327 1708 aa26.36■■□□□ 1.81
LINC01140-209ENST00000589455 HSPA2P54652 639 aa26.33■■□□□ 1.81
LINC01140-209ENST00000589455 EFCAB5A4FU69 1503 aa26.33■■□□□ 1.81
LINC01140-209ENST00000589455 ZFYVE16Q7Z3T8 1539 aa26.32■■□□□ 1.8
LINC01140-209ENST00000589455 YEATS2Q9ULM3 1422 aa26.31■■□□□ 1.8
LINC01140-209ENST00000589455 RIMS1Q86UR5 1692 aaKnown RBP26.31■■□□□ 1.8
LINC01140-209ENST00000589455 PLCH2O75038 1416 aa26.31■■□□□ 1.8
LINC01140-209ENST00000589455 SCAPERQ9BY12 1400 aa26.28■■□□□ 1.8
LINC01140-209ENST00000589455 TTC37Q6PGP7 1564 aa26.26■■□□□ 1.79
LINC01140-209ENST00000589455 MLECQ14165 292 aa26.25■■□□□ 1.79
LINC01140-209ENST00000589455 PLPPR3Q6T4P5 718 aa26.25■■□□□ 1.79
LINC01140-209ENST00000589455 CERKQ8TCT0 537 aa26.25■■□□□ 1.79
LINC01140-209ENST00000589455 EFCAB2Q5VUJ9 269 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms