RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 TOP2BQ02880 1626 aa39.2■■■■□ 3.87
CAPNS1-205ENST00000588780 BIVM-ERCC5R4GMW8 1640 aa39.18■■■■□ 3.86
CAPNS1-205ENST00000588780 ABCC10Q5T3U5 1492 aa39.05■■■■□ 3.84
CAPNS1-205ENST00000588780 RUSC2Q8N2Y8 1516 aa38.93■■■■□ 3.82
CAPNS1-205ENST00000588780 MAPKBP1O60336 1514 aa38.92■■■■□ 3.82
CAPNS1-205ENST00000588780 DIP2BQ9P265 1576 aa38.88■■■■□ 3.81
CAPNS1-205ENST00000588780 KDM6BO15054 1643 aa38.84■■■■□ 3.81
CAPNS1-205ENST00000588780 ADCY10Q96PN6 1610 aa38.84■■■■□ 3.81
CAPNS1-205ENST00000588780 KDM4FA0A1W2PPD8 638 aa38.8■■■■□ 3.8
CAPNS1-205ENST00000588780 TSPOAP1O95153 1857 aa38.77■■■■□ 3.8
CAPNS1-205ENST00000588780 TTBK1Q5TCY1 1321 aaPredicted RBP38.72■■■■□ 3.79
CAPNS1-205ENST00000588780 KIAA0586Q9BVV6 1533 aa38.7■■■■□ 3.79
CAPNS1-205ENST00000588780 PTPRGP23470 1445 aa38.59■■■■□ 3.77
CAPNS1-205ENST00000588780 IGF1RP08069 1367 aa38.57■■■■□ 3.76
CAPNS1-205ENST00000588780 KIF27Q86VH2 1401 aa38.53■■■■□ 3.76
CAPNS1-205ENST00000588780 ILDR1Q86SU0 546 aaPredicted RBP38.5■■■■□ 3.75
CAPNS1-205ENST00000588780 CUL7Q14999 1698 aa38.49■■■■□ 3.75
CAPNS1-205ENST00000588780 CARMIL2Q6F5E8 1435 aa38.44■■■■□ 3.74
CAPNS1-205ENST00000588780 TNIKQ9UKE5 1360 aa38.42■■■■□ 3.74
CAPNS1-205ENST00000588780 ABCC2Q92887 1545 aa38.4■■■■□ 3.74
CAPNS1-205ENST00000588780 ASXL2Q76L83 1435 aa38.39■■■■□ 3.74
CAPNS1-205ENST00000588780 PLB1Q6P1J6 1458 aa38.37■■■■□ 3.73
CAPNS1-205ENST00000588780 CARMIL1Q5VZK9 1371 aa38.34■■■■□ 3.73
CAPNS1-205ENST00000588780 ADGRL1O94910 1474 aa38.32■■■■□ 3.72
CAPNS1-205ENST00000588780 GLI2P10070 1586 aa38.27■■■■□ 3.72
CAPNS1-205ENST00000588780 PPRC1Q5VV67 1664 aaKnown RBP38.24■■■■□ 3.71
CAPNS1-205ENST00000588780 UACAQ9BZF9 1416 aa38.22■■■■□ 3.71
CAPNS1-205ENST00000588780 IQGAP2Q13576 1575 aa38.22■■■■□ 3.71
CAPNS1-205ENST00000588780 UHRF1BP1LA0JNW5 1464 aa38.19■■■■□ 3.7
CAPNS1-205ENST00000588780 EPRSP07814 1512 aaKnown RBP38.12■■■■□ 3.69
CAPNS1-205ENST00000588780 TEX14Q8IWB6 1497 aa38.11■■■■□ 3.69
CAPNS1-205ENST00000588780 COL17A1Q9UMD9 1497 aaPredicted RBP38.11■■■■□ 3.69
CAPNS1-205ENST00000588780 DISP1Q96F81 1524 aa38.06■■■■□ 3.68
CAPNS1-205ENST00000588780 MAP3K4Q9Y6R4 1608 aa38.04■■■■□ 3.68
CAPNS1-205ENST00000588780 KDM5BQ9UGL1 1544 aa38.03■■■■□ 3.68
CAPNS1-205ENST00000588780 HECW2Q9P2P5 1572 aa38.02■■■■□ 3.68
CAPNS1-205ENST00000588780 ZCCHC11Q5TAX3 1644 aaKnown RBP37.98■■■■□ 3.67
CAPNS1-205ENST00000588780 UGGT2Q9NYU1 1516 aa37.9■■■■□ 3.66
CAPNS1-205ENST00000588780 RAPGEF2Q9Y4G8 1499 aa37.88■■■■□ 3.65
CAPNS1-205ENST00000588780 WDR7Q9Y4E6 1490 aa37.87■■■■□ 3.65
CAPNS1-205ENST00000588780 KIAA0556O60303 1618 aa37.87■■■■□ 3.65
CAPNS1-205ENST00000588780 KCNH8Q96L42 1107 aa37.84■■■■□ 3.65
CAPNS1-205ENST00000588780 CD109Q6YHK3 1445 aa37.78■■■■□ 3.64
CAPNS1-205ENST00000588780 MAGI3Q5TCQ9 1506 aa37.68■■■■□ 3.62
CAPNS1-205ENST00000588780 CFAP43Q8NDM7 1665 aa37.66■■■■□ 3.62
CAPNS1-205ENST00000588780 GOLGA3Q08378 1498 aa37.63■■■■□ 3.61
CAPNS1-205ENST00000588780 KIF21BO75037 1637 aa37.57■■■■□ 3.6
CAPNS1-205ENST00000588780 FAM9AQ8IZU1 332 aaPredicted RBP37.55■■■■□ 3.6
CAPNS1-205ENST00000588780 CTTNBP2Q8WZ74 1663 aa37.55■■■■□ 3.6
CAPNS1-205ENST00000588780 ARID3CA6NKF2 412 aa37.54■■■■□ 3.6
CAPNS1-205ENST00000588780 ABCA8O94911 1581 aa37.54■■■■□ 3.6
CAPNS1-205ENST00000588780 FBXO41Q8TF61 875 aa37.51■■■■□ 3.6
CAPNS1-205ENST00000588780 ARAP3Q8WWN8 1544 aa37.41■■■■□ 3.58
CAPNS1-205ENST00000588780 P3H3Q8IVL6 736 aa37.38■■■■□ 3.57
CAPNS1-205ENST00000588780 PTPRMP28827 1452 aa37.33■■■■□ 3.57
CAPNS1-205ENST00000588780 ARID4BQ4LE39 1312 aaPredicted RBP37.33■■■■□ 3.57
CAPNS1-205ENST00000588780 RAPGEF3O95398 923 aa37.32■■■■□ 3.56
CAPNS1-205ENST00000588780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.29■■■■□ 3.56
CAPNS1-205ENST00000588780 HNRNPUL2Q1KMD3 747 aaKnown RBP37.29■■■■□ 3.56
CAPNS1-205ENST00000588780 PHLDB1Q86UU1 1377 aa37.29■■■■□ 3.56
CAPNS1-205ENST00000588780 ATP10BO94823 1461 aa37.28■■■■□ 3.56
CAPNS1-205ENST00000588780 ADAMTSL3P82987 1691 aa37.24■■■■□ 3.55
CAPNS1-205ENST00000588780 ABCA9Q8IUA7 1624 aa37.21■■■■□ 3.55
CAPNS1-205ENST00000588780 PRXQ9BXM0 1461 aa37.2■■■■□ 3.55
CAPNS1-205ENST00000588780 NEO1Q92859 1461 aa37.14■■■■□ 3.54
CAPNS1-205ENST00000588780 PCF11O94913 1555 aaKnown RBP37.11■■■■□ 3.53
CAPNS1-205ENST00000588780 MADDQ8WXG6 1647 aa37.1■■■■□ 3.53
CAPNS1-205ENST00000588780 BCORL1Q5H9F3 1711 aa37.1■■■■□ 3.53
CAPNS1-205ENST00000588780 PLPPR3Q6T4P5 718 aa37.1■■■■□ 3.53
CAPNS1-205ENST00000588780 RAPGEF6Q8TEU7 1601 aa37.04■■■■□ 3.52
CAPNS1-205ENST00000588780 LMTK3Q96Q04 1460 aa37.02■■■■□ 3.52
CAPNS1-205ENST00000588780 RANGAP1P46060 587 aaPredicted RBP37.02■■■■□ 3.52
CAPNS1-205ENST00000588780 FRMPD1Q5SYB0 1578 aa37.01■■■■□ 3.52
CAPNS1-205ENST00000588780 RIMS1Q86UR5 1692 aaKnown RBP36.98■■■■□ 3.51
CAPNS1-205ENST00000588780 HSPA2P54652 639 aa36.97■■■■□ 3.51
CAPNS1-205ENST00000588780 DENND4BO75064 1496 aaPredicted RBP36.94■■■■□ 3.5
CAPNS1-205ENST00000588780 SAMD9Q5K651 1589 aa36.93■■■■□ 3.5
CAPNS1-205ENST00000588780 PLEKHD1A6NEE1 506 aa36.93■■■■□ 3.5
CAPNS1-205ENST00000588780 ARHGEF40Q8TER5 1519 aa36.92■■■■□ 3.5
CAPNS1-205ENST00000588780 POGZQ7Z3K3 1410 aa36.89■■■■□ 3.5
CAPNS1-205ENST00000588780 NUP153P49790 1475 aaKnown RBP36.88■■■■□ 3.5
CAPNS1-205ENST00000588780 AKNAQ7Z591 1439 aa36.87■■■■□ 3.49
CAPNS1-205ENST00000588780 CSRNP3Q8WYN3 585 aa36.87■■■■□ 3.49
CAPNS1-205ENST00000588780 MLECQ14165 292 aa36.84■■■■□ 3.49
CAPNS1-205ENST00000588780 FANCAO15360 1455 aa36.83■■■■□ 3.49
CAPNS1-205ENST00000588780 RICTORQ6R327 1708 aa36.81■■■■□ 3.48
CAPNS1-205ENST00000588780 FHOD3Q2V2M9 1422 aa36.8■■■■□ 3.48
CAPNS1-205ENST00000588780 CFAP74Q9C0B2 1584 aa36.78■■■■□ 3.48
CAPNS1-205ENST00000588780 CERKQ8TCT0 537 aa36.78■■■■□ 3.48
CAPNS1-205ENST00000588780 ZFYVE16Q7Z3T8 1539 aa36.75■■■■□ 3.47
CAPNS1-205ENST00000588780 YEATS2Q9ULM3 1422 aa36.72■■■■□ 3.47
CAPNS1-205ENST00000588780 EFCAB5A4FU69 1503 aa36.71■■■■□ 3.47
CAPNS1-205ENST00000588780 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.7■■■■□ 3.476e-24■■□□□ 13
CAPNS1-205ENST00000588780 ZMYM4Q5VZL5 1548 aa36.67■■■■□ 3.46
CAPNS1-205ENST00000588780 TTC37Q6PGP7 1564 aa36.65■■■■□ 3.46
CAPNS1-205ENST00000588780 MAGI2Q86UL8 1455 aa36.63■■■■□ 3.45
CAPNS1-205ENST00000588780 FER1L4A9Z1Z3 1794 aa36.61■■■■□ 3.45
CAPNS1-205ENST00000588780 SIGLEC1Q9BZZ2 1709 aa36.6■■■■□ 3.45
CAPNS1-205ENST00000588780 SCAPERQ9BY12 1400 aa36.59■■■■□ 3.45
CAPNS1-205ENST00000588780 HECW1Q76N89 1606 aa36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms