RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
CDH8-213ENST00000584966 CSRNP3Q8WYN3 585 aa11.64□□□□□ -0.55
CDH8-213ENST00000584966 POTEJP0CG39 1038 aa11.63□□□□□ -0.55
CDH8-213ENST00000584966 ASTLQ6HA08 431 aaPredicted RBP11.63□□□□□ -0.55
CDH8-213ENST00000584966 ABCC9O60706 1549 aa11.62□□□□□ -0.55
CDH8-213ENST00000584966 ATMINO43313 823 aaPredicted RBP11.61□□□□□ -0.55
CDH8-213ENST00000584966 SLC39A7Q92504 469 aa11.61□□□□□ -0.55
CDH8-213ENST00000584966 C7P10643 843 aa11.6□□□□□ -0.55
CDH8-213ENST00000584966 PCDH10Q9P2E7 1040 aa11.58□□□□□ -0.56
CDH8-213ENST00000584966 MAMSTRQ6ZN01 415 aa11.55□□□□□ -0.56
CDH8-213ENST00000584966 FAM163AQ96GL9 167 aaPredicted RBP11.55□□□□□ -0.56
CDH8-213ENST00000584966 TSPYL2Q9H2G4 693 aaPredicted RBP11.53□□□□□ -0.56
CDH8-213ENST00000584966 LCE2DQ5TA82 110 aaPredicted RBP11.52□□□□□ -0.57
CDH8-213ENST00000584966 ATN1P54259 1190 aaPredicted RBP11.5□□□□□ -0.57
CDH8-213ENST00000584966 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
CDH8-213ENST00000584966 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
CDH8-213ENST00000584966 POTEFA5A3E0 1075 aa11.42□□□□□ -0.58
CDH8-213ENST00000584966 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
CDH8-213ENST00000584966 KIF12Q96FN5 646 aa11.4□□□□□ -0.58
CDH8-213ENST00000584966 BMP2KQ9NSY1 1161 aaPredicted RBP11.4□□□□□ -0.58
CDH8-213ENST00000584966 ZCCHC6Q5VYS8 1495 aaKnown RBP11.34□□□□□ -0.59
CDH8-213ENST00000584966 MAP3K13O43283 966 aa11.33□□□□□ -0.6
CDH8-213ENST00000584966 TIE1P35590 1138 aa11.31□□□□□ -0.6
CDH8-213ENST00000584966 COLQQ9Y215 455 aaPredicted RBP11.31□□□□□ -0.6
CDH8-213ENST00000584966 SEC24BO95487 1268 aa11.3□□□□□ -0.6
CDH8-213ENST00000584966 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
CDH8-213ENST00000584966 NACADO15069 1562 aa11.27□□□□□ -0.61
CDH8-213ENST00000584966 TTLL13PA6NNM8 815 aa11.26□□□□□ -0.61
CDH8-213ENST00000584966 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
CDH8-213ENST00000584966 MYO15BQ96JP2 1530 aa11.25□□□□□ -0.61
CDH8-213ENST00000584966 DCAF1Q9Y4B6 1507 aa11.25□□□□□ -0.61
CDH8-213ENST00000584966 PROM2Q8N271 834 aa11.25□□□□□ -0.61
CDH8-213ENST00000584966 RB1CC1Q8TDY2 1594 aa11.24□□□□□ -0.61
CDH8-213ENST00000584966 PLEKHG5O94827 1062 aa11.22□□□□□ -0.61
CDH8-213ENST00000584966 MIER1Q8N108 512 aa11.22□□□□□ -0.61
CDH8-213ENST00000584966 DCAF8L2P0C7V8 631 aa11.21□□□□□ -0.61
CDH8-213ENST00000584966 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
CDH8-213ENST00000584966 SLAIN1Q8ND83 568 aa11.17□□□□□ -0.62
CDH8-213ENST00000584966 ST18O60284 1047 aa11.16□□□□□ -0.62
CDH8-213ENST00000584966 PCDHB13Q9Y5F0 798 aa11.16□□□□□ -0.62
CDH8-213ENST00000584966 IER5LQ5T953 404 aa11.15□□□□□ -0.62
CDH8-213ENST00000584966 UNC13AQ9UPW8 1703 aa11.14□□□□□ -0.63
CDH8-213ENST00000584966 SGIP1Q9BQI5 828 aa11.1□□□□□ -0.63
CDH8-213ENST00000584966 PLCG2P16885 1265 aa11.07□□□□□ -0.64
CDH8-213ENST00000584966 IFNL1Q8IU54 200 aa11.07□□□□□ -0.64
CDH8-213ENST00000584966 PLCD3Q8N3E9 789 aa11.07□□□□□ -0.64
CDH8-213ENST00000584966 TMEM106CQ9BVX2 250 aa11.06□□□□□ -0.64
CDH8-213ENST00000584966 MMRN1Q13201 1228 aa11.04□□□□□ -0.64
CDH8-213ENST00000584966 NUBP1P53384 320 aa11.01□□□□□ -0.65
CDH8-213ENST00000584966 SPNS2Q8IVW8 549 aa11.01□□□□□ -0.65
CDH8-213ENST00000584966 IRX5P78411 483 aaPredicted RBP11□□□□□ -0.65
CDH8-213ENST00000584966 BICRAQ9NZM4 1560 aa10.98□□□□□ -0.65
CDH8-213ENST00000584966 SCRIBQ14160 1630 aa10.98□□□□□ -0.65
CDH8-213ENST00000584966 MARVELD3Q96A59 401 aa10.96□□□□□ -0.65
CDH8-213ENST00000584966 TMEM121BQ9BXQ6 578 aaPredicted RBP10.96□□□□□ -0.65
CDH8-213ENST00000584966 ZBTB47Q9UFB7 747 aaPredicted RBP10.96□□□□□ -0.65
CDH8-213ENST00000584966 FAM212AQ96EL1 285 aa10.95□□□□□ -0.66
CDH8-213ENST00000584966 OCEL1Q9H607 264 aa10.93□□□□□ -0.66
CDH8-213ENST00000584966 SNPHO15079 494 aa10.92□□□□□ -0.66
CDH8-213ENST00000584966 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.92□□□□□ -0.66
CDH8-213ENST00000584966 PYGBP11216 843 aa10.86□□□□□ -0.67
CDH8-213ENST00000584966 DCAF8Q5TAQ9 597 aa10.83□□□□□ -0.68
CDH8-213ENST00000584966 PCDHB8Q9UN66 801 aa10.83□□□□□ -0.68
CDH8-213ENST00000584966 EMP3P54852 163 aa10.81□□□□□ -0.68
CDH8-213ENST00000584966 C3orf67Q6ZVT6 689 aa10.78□□□□□ -0.68
CDH8-213ENST00000584966 SHROOM4Q9ULL8 1493 aa10.77□□□□□ -0.69
CDH8-213ENST00000584966 POTEB3A0JP26 581 aa10.75□□□□□ -0.69
CDH8-213ENST00000584966 FAM205CA6NFA0 338 aa10.75□□□□□ -0.69
CDH8-213ENST00000584966 POTEBQ6S5H4 581 aa10.75□□□□□ -0.69
CDH8-213ENST00000584966 PDCD7Q8N8D1 485 aaKnown RBP10.75□□□□□ -0.69
CDH8-213ENST00000584966 HS3ST6Q96QI5 342 aa10.75□□□□□ -0.69
CDH8-213ENST00000584966 KRTAP3-3Q9BYR6 98 aa10.75□□□□□ -0.69
CDH8-213ENST00000584966 KRTAP3-2Q9BYR7 98 aa10.75□□□□□ -0.69
CDH8-213ENST00000584966 L3MBTL3Q96JM7 780 aaPredicted RBP10.72□□□□□ -0.69
CDH8-213ENST00000584966 GOLGA2Q08379 1002 aa10.71□□□□□ -0.69
CDH8-213ENST00000584966 MKRN3Q13064 507 aaKnown RBP10.71□□□□□ -0.69
CDH8-213ENST00000584966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDH8-213ENST00000584966 ZNF467Q7Z7K2 595 aaPredicted RBP10.64□□□□□ -0.71
CDH8-213ENST00000584966 EIF4G1Q04637 1599 aaKnown RBP10.63□□□□□ -0.71
CDH8-213ENST00000584966 FKBP8Q14318 412 aa10.62□□□□□ -0.71
CDH8-213ENST00000584966 PSEN1P49768 467 aa10.59□□□□□ -0.71
CDH8-213ENST00000584966 CECR2Q9BXF3 1484 aa10.59□□□□□ -0.71
CDH8-213ENST00000584966 DPY19L2Q6NUT2 758 aa10.58□□□□□ -0.72
CDH8-213ENST00000584966 GSE1Q14687 1217 aa10.57□□□□□ -0.72
CDH8-213ENST00000584966 CC2D2AQ9P2K1 1620 aa10.56□□□□□ -0.72
CDH8-213ENST00000584966 HOXB3P14651 431 aaPredicted RBP10.55□□□□□ -0.72
CDH8-213ENST00000584966 KLHL34Q8N239 644 aa10.55□□□□□ -0.72
CDH8-213ENST00000584966 G3V3G9 751 aa10.53□□□□□ -0.72
CDH8-213ENST00000584966 SMARCA4P51532 1647 aa10.53□□□□□ -0.72
CDH8-213ENST00000584966 ZNF710Q8N1W2 664 aa10.52□□□□□ -0.73
CDH8-213ENST00000584966 ERBB3P21860 1342 aa10.52□□□□□ -0.73
CDH8-213ENST00000584966 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
CDH8-213ENST00000584966 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
CDH8-213ENST00000584966 RNF166Q96A37 237 aaPredicted RBP10.51□□□□□ -0.73
CDH8-213ENST00000584966 BOLA1Q9Y3E2 137 aa10.51□□□□□ -0.73
CDH8-213ENST00000584966 CHRM1P11229 460 aaPredicted RBP10.5□□□□□ -0.73
CDH8-213ENST00000584966 FBXO3Q9UK99 471 aa10.5□□□□□ -0.73
CDH8-213ENST00000584966 BAZ1AQ9NRL2 1556 aaPredicted RBP10.5□□□□□ -0.73
CDH8-213ENST00000584966 CABP2Q9NPB3 220 aa10.49□□□□□ -0.73
CDH8-213ENST00000584966 MROH2BQ7Z745 1585 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms