RNA–Protein interactions for RNA: ENST00000583439.1

DHX40-209, Transcript of DEAH-box helicase 40, humanhuman

TSL 3

Gene DHX40, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-209ENST00000583439 METRNQ9UJH8 293 aa12.2□□□□□ -0.46
DHX40-209ENST00000583439 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
DHX40-209ENST00000583439 C7P10643 843 aa12.19□□□□□ -0.46
DHX40-209ENST00000583439 ASTLQ6HA08 431 aaPredicted RBP12.19□□□□□ -0.46
DHX40-209ENST00000583439 MIER1Q8N108 512 aa12.19□□□□□ -0.46
DHX40-209ENST00000583439 SLC39A7Q92504 469 aa12.19□□□□□ -0.46
DHX40-209ENST00000583439 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
DHX40-209ENST00000583439 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
DHX40-209ENST00000583439 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
DHX40-209ENST00000583439 LCE2DQ5TA82 110 aaPredicted RBP12.13□□□□□ -0.47
DHX40-209ENST00000583439 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
DHX40-209ENST00000583439 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
DHX40-209ENST00000583439 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
DHX40-209ENST00000583439 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
DHX40-209ENST00000583439 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
DHX40-209ENST00000583439 FBXO3Q9UK99 471 aa12.04□□□□□ -0.48
DHX40-209ENST00000583439 TSPYL2Q9H2G4 693 aaPredicted RBP11.99□□□□□ -0.49
DHX40-209ENST00000583439 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
DHX40-209ENST00000583439 ZBTB47Q9UFB7 747 aaPredicted RBP11.97□□□□□ -0.49
DHX40-209ENST00000583439 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
DHX40-209ENST00000583439 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
DHX40-209ENST00000583439 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
DHX40-209ENST00000583439 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
DHX40-209ENST00000583439 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
DHX40-209ENST00000583439 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
DHX40-209ENST00000583439 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
DHX40-209ENST00000583439 KIF12Q96FN5 646 aa11.84□□□□□ -0.51
DHX40-209ENST00000583439 TIE1P35590 1138 aa11.82□□□□□ -0.52
DHX40-209ENST00000583439 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
DHX40-209ENST00000583439 SEC24BO95487 1268 aa11.77□□□□□ -0.53
DHX40-209ENST00000583439 NUBP1P53384 320 aa11.77□□□□□ -0.53
DHX40-209ENST00000583439 TRPC6Q9Y210 931 aa11.77□□□□□ -0.53
DHX40-209ENST00000583439 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
DHX40-209ENST00000583439 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
DHX40-209ENST00000583439 MAP3K13O43283 966 aa11.73□□□□□ -0.53
DHX40-209ENST00000583439 TTLL13PA6NNM8 815 aa11.7□□□□□ -0.54
DHX40-209ENST00000583439 ST18O60284 1047 aa11.7□□□□□ -0.54
DHX40-209ENST00000583439 IER5LQ5T953 404 aa11.69□□□□□ -0.54
DHX40-209ENST00000583439 MMRN1Q13201 1228 aa11.67□□□□□ -0.54
DHX40-209ENST00000583439 SLAIN1Q8ND83 568 aa11.67□□□□□ -0.54
DHX40-209ENST00000583439 PCDHB13Q9Y5F0 798 aa11.66□□□□□ -0.54
DHX40-209ENST00000583439 PYGBP11216 843 aa11.63□□□□□ -0.55
DHX40-209ENST00000583439 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
DHX40-209ENST00000583439 SPNS2Q8IVW8 549 aa11.63□□□□□ -0.55
DHX40-209ENST00000583439 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
DHX40-209ENST00000583439 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
DHX40-209ENST00000583439 GSE1Q14687 1217 aa11.61□□□□□ -0.55
DHX40-209ENST00000583439 SGIP1Q9BQI5 828 aa11.61□□□□□ -0.55
DHX40-209ENST00000583439 CIZ1Q9ULV3 898 aaPredicted RBP11.59□□□□□ -0.55
DHX40-209ENST00000583439 TMEM121BQ9BXQ6 578 aaPredicted RBP11.57□□□□□ -0.56
DHX40-209ENST00000583439 IFNL1Q8IU54 200 aa11.55□□□□□ -0.56
DHX40-209ENST00000583439 PLCG2P16885 1265 aa11.51□□□□□ -0.57
DHX40-209ENST00000583439 SNPHO15079 494 aa11.5□□□□□ -0.57
DHX40-209ENST00000583439 PCDHB8Q9UN66 801 aa11.5□□□□□ -0.57
DHX40-209ENST00000583439 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
DHX40-209ENST00000583439 IRX5P78411 483 aaPredicted RBP11.44□□□□□ -0.58
DHX40-209ENST00000583439 ZNF467Q7Z7K2 595 aaPredicted RBP11.43□□□□□ -0.58
DHX40-209ENST00000583439 MARVELD3Q96A59 401 aa11.41□□□□□ -0.58
DHX40-209ENST00000583439 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
DHX40-209ENST00000583439 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
DHX40-209ENST00000583439 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
DHX40-209ENST00000583439 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
DHX40-209ENST00000583439 PSEN1P49768 467 aa11.33□□□□□ -0.6
DHX40-209ENST00000583439 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
DHX40-209ENST00000583439 PDAP1Q13442 181 aaKnown RBP11.3□□□□□ -0.6
DHX40-209ENST00000583439 EMP3P54852 163 aa11.29□□□□□ -0.6
DHX40-209ENST00000583439 MKRN3Q13064 507 aaKnown RBP11.29□□□□□ -0.6
DHX40-209ENST00000583439 KRTAP3-3Q9BYR6 98 aa11.28□□□□□ -0.6
DHX40-209ENST00000583439 KRTAP3-2Q9BYR7 98 aa11.28□□□□□ -0.6
DHX40-209ENST00000583439 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
DHX40-209ENST00000583439 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
DHX40-209ENST00000583439 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
DHX40-209ENST00000583439 CABP2Q9NPB3 220 aa11.22□□□□□ -0.61
DHX40-209ENST00000583439 FAM205CA6NFA0 338 aa11.21□□□□□ -0.61
DHX40-209ENST00000583439 RIOK3O14730 519 aaKnown RBP11.19□□□□□ -0.62
DHX40-209ENST00000583439 C3orf67Q6ZVT6 689 aa11.19□□□□□ -0.62
DHX40-209ENST00000583439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.19□□□□□ -0.62
DHX40-209ENST00000583439 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
DHX40-209ENST00000583439 ECM2O94769 699 aaPredicted RBP11.17□□□□□ -0.62
DHX40-209ENST00000583439 PDCD7Q8N8D1 485 aaKnown RBP11.16□□□□□ -0.62
DHX40-209ENST00000583439 VGFO15240 615 aaPredicted RBP11.13□□□□□ -0.63
DHX40-209ENST00000583439 RNF25Q96BH1 459 aaPredicted RBP11.13□□□□□ -0.63
DHX40-209ENST00000583439 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.11□□□□□ -0.63
DHX40-209ENST00000583439 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
DHX40-209ENST00000583439 TAOK2Q9UL54 1235 aa11.11□□□□□ -0.63
DHX40-209ENST00000583439 G3V3G9 751 aa11.1□□□□□ -0.63
DHX40-209ENST00000583439 EFCAB3Q8N7B9 438 aa11.08□□□□□ -0.64
DHX40-209ENST00000583439 PKD2Q13563 968 aa11.06□□□□□ -0.64
DHX40-209ENST00000583439 DPY19L2Q6NUT2 758 aa11.04□□□□□ -0.64
DHX40-209ENST00000583439 RNF166Q96A37 237 aaPredicted RBP11.04□□□□□ -0.64
DHX40-209ENST00000583439 STK24Q9Y6E0 443 aa11.04□□□□□ -0.64
DHX40-209ENST00000583439 BCL11BQ9C0K0 894 aaPredicted RBP11.03□□□□□ -0.64
DHX40-209ENST00000583439 STK25O00506 426 aa11.02□□□□□ -0.65
DHX40-209ENST00000583439 RGL2O15211 777 aa11.01□□□□□ -0.65
DHX40-209ENST00000583439 HOXB1P14653 301 aaPredicted RBP10.99□□□□□ -0.65
DHX40-209ENST00000583439 HOXB3P14651 431 aaPredicted RBP10.98□□□□□ -0.65
DHX40-209ENST00000583439 BOLA1Q9Y3E2 137 aa10.98□□□□□ -0.65
DHX40-209ENST00000583439 SOX12O15370 315 aa10.97□□□□□ -0.65
DHX40-209ENST00000583439 ERBB3P21860 1342 aa10.96□□□□□ -0.65
DHX40-209ENST00000583439 ILDR1Q86SU0 546 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms