RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 FHAD1B1AJZ9 1412 aa17.34■□□□□ 0.37
GGA3-213ENST00000582486 CTTNBP2Q8WZ74 1663 aa17.33■□□□□ 0.36
GGA3-213ENST00000582486 EIF4G3O43432 1585 aaKnown RBP17.31■□□□□ 0.36
GGA3-213ENST00000582486 ADAMTS12P58397 1594 aa17.31■□□□□ 0.36
GGA3-213ENST00000582486 P3H3Q8IVL6 736 aa17.3■□□□□ 0.36
GGA3-213ENST00000582486 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.36
GGA3-213ENST00000582486 EFCAB5A4FU69 1503 aa17.24■□□□□ 0.35
GGA3-213ENST00000582486 FHOD3Q2V2M9 1422 aa17.24■□□□□ 0.35
GGA3-213ENST00000582486 HRCP23327 699 aa17.22■□□□□ 0.35
GGA3-213ENST00000582486 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
GGA3-213ENST00000582486 MAGI1Q96QZ7 1491 aaPredicted RBP17.2■□□□□ 0.34
GGA3-213ENST00000582486 GRIN2AQ12879 1464 aa17.17■□□□□ 0.34
GGA3-213ENST00000582486 SAMD9Q5K651 1589 aa17.17■□□□□ 0.34
GGA3-213ENST00000582486 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
GGA3-213ENST00000582486 IQGAP2Q13576 1575 aa17.16■□□□□ 0.34
GGA3-213ENST00000582486 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
GGA3-213ENST00000582486 FBLN2P98095 1184 aa17.14■□□□□ 0.33
GGA3-213ENST00000582486 ATP1B4Q9UN42 357 aaPredicted RBP17.14■□□□□ 0.33
GGA3-213ENST00000582486 PCF11O94913 1555 aaKnown RBP17.14■□□□□ 0.33
GGA3-213ENST00000582486 FMN1Q68DA7 1419 aa17.12■□□□□ 0.33
GGA3-213ENST00000582486 KIAA0586Q9BVV6 1533 aa17.12■□□□□ 0.33
GGA3-213ENST00000582486 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
GGA3-213ENST00000582486 TIAM1Q13009 1591 aa17.1■□□□□ 0.33
GGA3-213ENST00000582486 CASKIN1Q8WXD9 1431 aa17.1■□□□□ 0.33
GGA3-213ENST00000582486 FYCO1Q9BQS8 1478 aa17.09■□□□□ 0.33
GGA3-213ENST00000582486 UGGT2Q9NYU1 1516 aa17.07■□□□□ 0.32
GGA3-213ENST00000582486 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
GGA3-213ENST00000582486 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
GGA3-213ENST00000582486 NUP160Q12769 1436 aa17.03■□□□□ 0.32
GGA3-213ENST00000582486 CFAP43Q8NDM7 1665 aa17.03■□□□□ 0.32
GGA3-213ENST00000582486 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.31
GGA3-213ENST00000582486 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
GGA3-213ENST00000582486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
GGA3-213ENST00000582486 KIAA0556O60303 1618 aa16.98■□□□□ 0.31
GGA3-213ENST00000582486 JPH4Q96JJ6 628 aa16.97■□□□□ 0.31
GGA3-213ENST00000582486 RRBP1Q9P2E9 1410 aaKnown RBP16.97■□□□□ 0.31
GGA3-213ENST00000582486 LRRIQ1Q96JM4 1722 aa16.96■□□□□ 0.31
GGA3-213ENST00000582486 PHLDB1Q86UU1 1377 aa16.93■□□□□ 0.3
GGA3-213ENST00000582486 CCNB3Q8WWL7 1395 aa16.93■□□□□ 0.3
GGA3-213ENST00000582486 MTUS2Q5JR59 1369 aa16.92■□□□□ 0.3
GGA3-213ENST00000582486 ZEB1P37275 1124 aaPredicted RBP16.92■□□□□ 0.3
GGA3-213ENST00000582486 CCER1Q8TC90 406 aaPredicted RBP16.92■□□□□ 0.3
GGA3-213ENST00000582486 CHD1O14646 1710 aa16.91■□□□□ 0.3
GGA3-213ENST00000582486 HECW1Q76N89 1606 aa16.91■□□□□ 0.3
GGA3-213ENST00000582486 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
GGA3-213ENST00000582486 CCDC18Q5T9S5 1454 aa16.89■□□□□ 0.3
GGA3-213ENST00000582486 EPRSP07814 1512 aaKnown RBP16.88■□□□□ 0.29
GGA3-213ENST00000582486 ARID3CA6NKF2 412 aa16.88■□□□□ 0.29
GGA3-213ENST00000582486 CDK13Q14004 1512 aaKnown RBP16.85■□□□□ 0.29
GGA3-213ENST00000582486 MAGI3Q5TCQ9 1506 aa16.84■□□□□ 0.29
GGA3-213ENST00000582486 ITGAEP38570 1179 aa16.84■□□□□ 0.29
GGA3-213ENST00000582486 RAPGEF6Q8TEU7 1601 aa16.83■□□□□ 0.29
GGA3-213ENST00000582486 EHBP1L1Q8N3D4 1523 aa16.83■□□□□ 0.28
GGA3-213ENST00000582486 NUP153P49790 1475 aaKnown RBP16.83■□□□□ 0.28
GGA3-213ENST00000582486 PRG4Q92954 1404 aaPredicted RBP16.82■□□□□ 0.28
GGA3-213ENST00000582486 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
GGA3-213ENST00000582486 PLB1Q6P1J6 1458 aa16.82■□□□□ 0.28
GGA3-213ENST00000582486 NCOA2Q15596 1464 aa16.81■□□□□ 0.28
GGA3-213ENST00000582486 SUPT6HQ7KZ85 1726 aaKnown RBP16.79■□□□□ 0.28
GGA3-213ENST00000582486 FGD6Q6ZV73 1430 aa16.77■□□□□ 0.28
GGA3-213ENST00000582486 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
GGA3-213ENST00000582486 MYOM3Q5VTT5 1437 aa16.75■□□□□ 0.27
GGA3-213ENST00000582486 SHROOM2Q13796 1616 aa16.75■□□□□ 0.27
GGA3-213ENST00000582486 PTPRGP23470 1445 aa16.74■□□□□ 0.27
GGA3-213ENST00000582486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.74■□□□□ 0.27
GGA3-213ENST00000582486 CDK11AQ9UQ88 783 aaPredicted RBP16.73■□□□□ 0.27
GGA3-213ENST00000582486 ABCA8O94911 1581 aa16.73■□□□□ 0.27
GGA3-213ENST00000582486 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
GGA3-213ENST00000582486 ERCC6L2Q5T890 1561 aa16.7■□□□□ 0.26
GGA3-213ENST00000582486 TROQ12816 1431 aaPredicted RBP16.66■□□□□ 0.26
GGA3-213ENST00000582486 ATP10BO94823 1461 aa16.66■□□□□ 0.26
GGA3-213ENST00000582486 PTPN23Q9H3S7 1636 aa16.66■□□□□ 0.26
GGA3-213ENST00000582486 RAB3GAP2Q9H2M9 1393 aa16.65■□□□□ 0.26
GGA3-213ENST00000582486 SETD5Q9C0A6 1442 aa16.64■□□□□ 0.25
GGA3-213ENST00000582486 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
GGA3-213ENST00000582486 UACAQ9BZF9 1416 aa16.63■□□□□ 0.25
GGA3-213ENST00000582486 MIA2Q96PC5 1412 aa16.63■□□□□ 0.25
GGA3-213ENST00000582486 PLEKHD1A6NEE1 506 aa16.63■□□□□ 0.25
GGA3-213ENST00000582486 PTPRKQ15262 1439 aa16.62■□□□□ 0.25
GGA3-213ENST00000582486 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
GGA3-213ENST00000582486 KIF14Q15058 1648 aa16.59■□□□□ 0.25
GGA3-213ENST00000582486 ADCY10Q96PN6 1610 aa16.57■□□□□ 0.24
GGA3-213ENST00000582486 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
GGA3-213ENST00000582486 ZNF644Q9H582 1327 aaPredicted RBP16.55■□□□□ 0.24
GGA3-213ENST00000582486 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
GGA3-213ENST00000582486 ABCC2Q92887 1545 aa16.55■□□□□ 0.24
GGA3-213ENST00000582486 GPATCH8Q9UKJ3 1502 aaKnown RBP16.55■□□□□ 0.24
GGA3-213ENST00000582486 CFDP1Q9UEE9 299 aaPredicted RBP16.54■□□□□ 0.24
GGA3-213ENST00000582486 HFM1A2PYH4 1435 aa16.53■□□□□ 0.24
GGA3-213ENST00000582486 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
GGA3-213ENST00000582486 ABCC10Q5T3U5 1492 aa16.51■□□□□ 0.23
GGA3-213ENST00000582486 NAIPQ13075 1403 aa16.51■□□□□ 0.23
GGA3-213ENST00000582486 ITSN2Q9NZM3 1697 aa16.51■□□□□ 0.23
GGA3-213ENST00000582486 RRP7BPQ9NSQ0 103 aa16.5■□□□□ 0.23
GGA3-213ENST00000582486 ZNF777Q9ULD5 760 aaPredicted RBP16.5■□□□□ 0.23
GGA3-213ENST00000582486 UHRF1BP1LA0JNW5 1464 aa16.49■□□□□ 0.23
GGA3-213ENST00000582486 DAPK1P53355 1430 aa16.48■□□□□ 0.23
GGA3-213ENST00000582486 CAMSAP2Q08AD1 1489 aa16.47■□□□□ 0.23
GGA3-213ENST00000582486 ABCC5O15440 1437 aa16.47■□□□□ 0.23
GGA3-213ENST00000582486 CDC42BPAQ5VT25 1732 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms