RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
SRSF1-203ENST00000581497 GALR2O43603 387 aaPredicted RBP15.56■□□□□ 0.08
SRSF1-203ENST00000581497 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
SRSF1-203ENST00000581497 MNX1P50219 401 aaPredicted RBP15.5■□□□□ 0.07
SRSF1-203ENST00000581497 PHF12Q96QT6 1004 aa15.49■□□□□ 0.07
SRSF1-203ENST00000581497 EIF4G1Q04637 1599 aaKnown RBP15.48■□□□□ 0.07
SRSF1-203ENST00000581497 CC2D2AQ9P2K1 1620 aa15.47■□□□□ 0.07
SRSF1-203ENST00000581497 CECR2Q9BXF3 1484 aa15.46■□□□□ 0.06
SRSF1-203ENST00000581497 PROM2Q8N271 834 aa15.39■□□□□ 0.05
SRSF1-203ENST00000581497 MS4A3Q96HJ5 214 aa15.28■□□□□ 0.04
SRSF1-203ENST00000581497 POTEB2H3BUK9 544 aa15.27■□□□□ 0.04
SRSF1-203ENST00000581497 PELP1Q8IZL8 1130 aaKnown RBP15.27■□□□□ 0.04
SRSF1-203ENST00000581497 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
SRSF1-203ENST00000581497 TSPYL2Q9H2G4 693 aaPredicted RBP15.25■□□□□ 0.03
SRSF1-203ENST00000581497 ASTLQ6HA08 431 aaPredicted RBP15.22■□□□□ 0.03
SRSF1-203ENST00000581497 ATMINO43313 823 aaPredicted RBP15.18■□□□□ 0.02
SRSF1-203ENST00000581497 CCDC61Q9Y6R9 512 aa15.18■□□□□ 0.02
SRSF1-203ENST00000581497 METRNQ9UJH8 293 aa15.17■□□□□ 0.02
SRSF1-203ENST00000581497 PLEKHG5O94827 1062 aa15.15■□□□□ 0.02
SRSF1-203ENST00000581497 SLC39A7Q92504 469 aa15.14■□□□□ 0.01
SRSF1-203ENST00000581497 C7P10643 843 aa15.12■□□□□ 0.01
SRSF1-203ENST00000581497 MIER1Q8N108 512 aa15.12■□□□□ 0.01
SRSF1-203ENST00000581497 KIF12Q96FN5 646 aa15.1■□□□□ 0.01
SRSF1-203ENST00000581497 NCAPD3P42695 1498 aa15.07■□□□□ 0
SRSF1-203ENST00000581497 ATN1P54259 1190 aaPredicted RBP15.05■□□□□ -0
SRSF1-203ENST00000581497 RASEFQ8IZ41 740 aa15.03■□□□□ -0
SRSF1-203ENST00000581497 PLSCR2Q9NRY7 297 aa15.03■□□□□ -0
SRSF1-203ENST00000581497 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
SRSF1-203ENST00000581497 POTEJP0CG39 1038 aa15.01□□□□□ -0.01
SRSF1-203ENST00000581497 MAP3K13O43283 966 aa15□□□□□ -0.01
SRSF1-203ENST00000581497 BMP2KQ9NSY1 1161 aaPredicted RBP14.99□□□□□ -0.01
SRSF1-203ENST00000581497 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
SRSF1-203ENST00000581497 PLCD3Q8N3E9 789 aa14.98□□□□□ -0.01
SRSF1-203ENST00000581497 TRPC6Q9Y210 931 aa14.98□□□□□ -0.01
SRSF1-203ENST00000581497 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
SRSF1-203ENST00000581497 MAMSTRQ6ZN01 415 aa14.97□□□□□ -0.01
SRSF1-203ENST00000581497 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
SRSF1-203ENST00000581497 POTEMA6NI47 508 aa14.95□□□□□ -0.02
SRSF1-203ENST00000581497 TIE1P35590 1138 aa14.94□□□□□ -0.02
SRSF1-203ENST00000581497 HMGXB3Q12766 1538 aa14.93□□□□□ -0.02
SRSF1-203ENST00000581497 POTEGQ6S5H5 508 aa14.9□□□□□ -0.02
SRSF1-203ENST00000581497 SCUBE2Q9NQ36 999 aa14.89□□□□□ -0.03
SRSF1-203ENST00000581497 ZBTB47Q9UFB7 747 aaPredicted RBP14.89□□□□□ -0.03
SRSF1-203ENST00000581497 BAZ1BQ9UIG0 1483 aaKnown RBP14.89□□□□□ -0.03
SRSF1-203ENST00000581497 POTEFA5A3E0 1075 aa14.88□□□□□ -0.03
SRSF1-203ENST00000581497 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
SRSF1-203ENST00000581497 TTLL13PA6NNM8 815 aa14.85□□□□□ -0.03
SRSF1-203ENST00000581497 NUBP1P53384 320 aa14.84□□□□□ -0.03
SRSF1-203ENST00000581497 SGIP1Q9BQI5 828 aa14.84□□□□□ -0.03
SRSF1-203ENST00000581497 MROH2BQ7Z745 1585 aa14.84□□□□□ -0.03
SRSF1-203ENST00000581497 ERCC6Q03468 1493 aa14.83□□□□□ -0.03
SRSF1-203ENST00000581497 PCDHB13Q9Y5F0 798 aa14.83□□□□□ -0.04
SRSF1-203ENST00000581497 FKBP8Q14318 412 aa14.8□□□□□ -0.04
SRSF1-203ENST00000581497 SEC24BO95487 1268 aa14.78□□□□□ -0.04
SRSF1-203ENST00000581497 COLQQ9Y215 455 aaPredicted RBP14.78□□□□□ -0.04
SRSF1-203ENST00000581497 CUX2O14529 1486 aa14.77□□□□□ -0.04
SRSF1-203ENST00000581497 TRIM35Q9UPQ4 493 aa14.77□□□□□ -0.05
SRSF1-203ENST00000581497 FAM212AQ96EL1 285 aa14.76□□□□□ -0.05
SRSF1-203ENST00000581497 NESP48681 1621 aa14.75□□□□□ -0.05
SRSF1-203ENST00000581497 IER5LQ5T953 404 aa14.74□□□□□ -0.05
SRSF1-203ENST00000581497 LCE2DQ5TA82 110 aaPredicted RBP14.74□□□□□ -0.05
SRSF1-203ENST00000581497 FAM163AQ96GL9 167 aaPredicted RBP14.74□□□□□ -0.05
SRSF1-203ENST00000581497 IFNL1Q8IU54 200 aa14.73□□□□□ -0.05
SRSF1-203ENST00000581497 PCDH10Q9P2E7 1040 aa14.72□□□□□ -0.05
SRSF1-203ENST00000581497 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
SRSF1-203ENST00000581497 DNAJC5Q9H3Z4 198 aa14.67□□□□□ -0.06
SRSF1-203ENST00000581497 TMEM106CQ9BVX2 250 aa14.66□□□□□ -0.06
SRSF1-203ENST00000581497 PDS5BQ9NTI5 1447 aa14.65□□□□□ -0.06
SRSF1-203ENST00000581497 CADPSQ9ULU8 1353 aa14.63□□□□□ -0.07
SRSF1-203ENST00000581497 WIZO95785 1651 aa14.62□□□□□ -0.07
SRSF1-203ENST00000581497 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
SRSF1-203ENST00000581497 DCAF8Q5TAQ9 597 aa14.59□□□□□ -0.07
SRSF1-203ENST00000581497 PLCG2P16885 1265 aa14.57□□□□□ -0.08
SRSF1-203ENST00000581497 FBXO3Q9UK99 471 aa14.57□□□□□ -0.08
SRSF1-203ENST00000581497 PYGBP11216 843 aa14.56□□□□□ -0.08
SRSF1-203ENST00000581497 THOC2Q8NI27 1593 aaKnown RBP14.56□□□□□ -0.08
SRSF1-203ENST00000581497 SLAIN1Q8ND83 568 aa14.53□□□□□ -0.08
SRSF1-203ENST00000581497 IRX5P78411 483 aaPredicted RBP14.52□□□□□ -0.09
SRSF1-203ENST00000581497 TOP2AP11388 1531 aaKnown RBP14.5□□□□□ -0.09
SRSF1-203ENST00000581497 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
SRSF1-203ENST00000581497 PCDHB8Q9UN66 801 aa14.48□□□□□ -0.09
SRSF1-203ENST00000581497 MRC2Q9UBG0 1479 aa14.48□□□□□ -0.09
SRSF1-203ENST00000581497 CFTRP13569 1480 aa14.46□□□□□ -0.09
SRSF1-203ENST00000581497 OCEL1Q9H607 264 aa14.46□□□□□ -0.09
SRSF1-203ENST00000581497 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
SRSF1-203ENST00000581497 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
SRSF1-203ENST00000581497 KLHL34Q8N239 644 aa14.42□□□□□ -0.1
SRSF1-203ENST00000581497 VASPP50552 380 aaPredicted RBP14.41□□□□□ -0.1
SRSF1-203ENST00000581497 WDR62O43379 1518 aa14.41□□□□□ -0.1
SRSF1-203ENST00000581497 ST18O60284 1047 aa14.4□□□□□ -0.1
SRSF1-203ENST00000581497 GSE1Q14687 1217 aa14.39□□□□□ -0.11
SRSF1-203ENST00000581497 CDAN1Q8IWY9 1227 aa14.39□□□□□ -0.11
SRSF1-203ENST00000581497 ZNF467Q7Z7K2 595 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-203ENST00000581497 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
SRSF1-203ENST00000581497 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.33□□□□□ -0.12
SRSF1-203ENST00000581497 CHRM1P11229 460 aaPredicted RBP14.29□□□□□ -0.12
SRSF1-203ENST00000581497 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
SRSF1-203ENST00000581497 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
SRSF1-203ENST00000581497 SNPHO15079 494 aa14.27□□□□□ -0.13
SRSF1-203ENST00000581497 MKRN3Q13064 507 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms