RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 DCAF8Q5TAQ9 597 aa15.03■□□□□ -0
PPP4R1-216ENST00000580283 GSE1Q14687 1217 aa14.98□□□□□ -0.01
PPP4R1-216ENST00000580283 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
PPP4R1-216ENST00000580283 ZNF579Q8NAF0 562 aaKnown RBP14.96□□□□□ -0.01
PPP4R1-216ENST00000580283 CIZ1Q9ULV3 898 aaPredicted RBP14.95□□□□□ -0.02
PPP4R1-216ENST00000580283 CCDC61Q9Y6R9 512 aa14.93□□□□□ -0.02
PPP4R1-216ENST00000580283 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
PPP4R1-216ENST00000580283 PHF12Q96QT6 1004 aa14.91□□□□□ -0.02
PPP4R1-216ENST00000580283 CLCN6P51797 869 aa14.88□□□□□ -0.03
PPP4R1-216ENST00000580283 GABBR2O75899 941 aa14.83□□□□□ -0.04
PPP4R1-216ENST00000580283 PYGBP11216 843 aa14.81□□□□□ -0.04
PPP4R1-216ENST00000580283 KIF12Q96FN5 646 aa14.8□□□□□ -0.04
PPP4R1-216ENST00000580283 TRIM41Q8WV44 630 aa14.78□□□□□ -0.04
PPP4R1-216ENST00000580283 MAP3K13O43283 966 aa14.77□□□□□ -0.05
PPP4R1-216ENST00000580283 PCDHB13Q9Y5F0 798 aa14.75□□□□□ -0.05
PPP4R1-216ENST00000580283 MS4A3Q96HJ5 214 aa14.74□□□□□ -0.05
PPP4R1-216ENST00000580283 GALR2O43603 387 aaPredicted RBP14.73□□□□□ -0.05
PPP4R1-216ENST00000580283 SGIP1Q9BQI5 828 aa14.73□□□□□ -0.05
PPP4R1-216ENST00000580283 CHRM1P11229 460 aaPredicted RBP14.72□□□□□ -0.05
PPP4R1-216ENST00000580283 ECM2O94769 699 aaPredicted RBP14.67□□□□□ -0.06
PPP4R1-216ENST00000580283 PKD2Q13563 968 aa14.65□□□□□ -0.06
PPP4R1-216ENST00000580283 ZNF467Q7Z7K2 595 aaPredicted RBP14.65□□□□□ -0.06
PPP4R1-216ENST00000580283 IFNL1Q8IU54 200 aa14.64□□□□□ -0.07
PPP4R1-216ENST00000580283 DCBLD2Q96PD2 775 aa14.64□□□□□ -0.07
PPP4R1-216ENST00000580283 PCDHB8Q9UN66 801 aa14.61□□□□□ -0.07
PPP4R1-216ENST00000580283 AMER1Q5JTC6 1135 aaPredicted RBP14.57□□□□□ -0.08
PPP4R1-216ENST00000580283 TIE1P35590 1138 aa14.54□□□□□ -0.08
PPP4R1-216ENST00000580283 TRPC6Q9Y210 931 aa14.54□□□□□ -0.08
PPP4R1-216ENST00000580283 RIOK3O14730 519 aaKnown RBP14.52□□□□□ -0.09
PPP4R1-216ENST00000580283 PDAP1Q13442 181 aaKnown RBP14.49□□□□□ -0.09
PPP4R1-216ENST00000580283 RNF25Q96BH1 459 aaPredicted RBP14.49□□□□□ -0.09
PPP4R1-216ENST00000580283 BMP2KQ9NSY1 1161 aaPredicted RBP14.49□□□□□ -0.09
PPP4R1-216ENST00000580283 TAOK2Q9UL54 1235 aa14.49□□□□□ -0.09
PPP4R1-216ENST00000580283 TMEM106CQ9BVX2 250 aa14.48□□□□□ -0.09
PPP4R1-216ENST00000580283 RGL2O15211 777 aa14.47□□□□□ -0.09
PPP4R1-216ENST00000580283 PSEN1P49768 467 aa14.47□□□□□ -0.09
PPP4R1-216ENST00000580283 ATMINO43313 823 aaPredicted RBP14.46□□□□□ -0.09
PPP4R1-216ENST00000580283 POTEIP0CG38 1075 aa14.46□□□□□ -0.09
PPP4R1-216ENST00000580283 ASTLQ6HA08 431 aaPredicted RBP14.46□□□□□ -0.09
PPP4R1-216ENST00000580283 RTN4Q9NQC3 1192 aaKnown RBP14.46□□□□□ -0.09
PPP4R1-216ENST00000580283 TTLL13PA6NNM8 815 aa14.45□□□□□ -0.1
PPP4R1-216ENST00000580283 VGFO15240 615 aaPredicted RBP14.45□□□□□ -0.1
PPP4R1-216ENST00000580283 ATN1P54259 1190 aaPredicted RBP14.43□□□□□ -0.1
PPP4R1-216ENST00000580283 TRIM35Q9UPQ4 493 aa14.38□□□□□ -0.11
PPP4R1-216ENST00000580283 RB1CC1Q8TDY2 1594 aa14.38□□□□□ -0.11
PPP4R1-216ENST00000580283 GOLGA2Q08379 1002 aa14.37□□□□□ -0.11
PPP4R1-216ENST00000580283 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.36□□□□□ -0.11
PPP4R1-216ENST00000580283 ZFP91Q96JP5 570 aaPredicted RBP14.36□□□□□ -0.11
PPP4R1-216ENST00000580283 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
PPP4R1-216ENST00000580283 PELP1Q8IZL8 1130 aaKnown RBP14.35□□□□□ -0.11
PPP4R1-216ENST00000580283 SLC39A7Q92504 469 aa14.33□□□□□ -0.12
PPP4R1-216ENST00000580283 CABP2Q9NPB3 220 aa14.31□□□□□ -0.12
PPP4R1-216ENST00000580283 STK25O00506 426 aa14.3□□□□□ -0.12
PPP4R1-216ENST00000580283 C7P10643 843 aa14.29□□□□□ -0.12
PPP4R1-216ENST00000580283 MKRN3Q13064 507 aaKnown RBP14.29□□□□□ -0.12
PPP4R1-216ENST00000580283 BCL11BQ9C0K0 894 aaPredicted RBP14.28□□□□□ -0.12
PPP4R1-216ENST00000580283 METRNQ9UJH8 293 aa14.28□□□□□ -0.12
PPP4R1-216ENST00000580283 STK24Q9Y6E0 443 aa14.28□□□□□ -0.12
PPP4R1-216ENST00000580283 IER5LQ5T953 404 aa14.27□□□□□ -0.13
PPP4R1-216ENST00000580283 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
PPP4R1-216ENST00000580283 SEC24BO95487 1268 aa14.23□□□□□ -0.13
PPP4R1-216ENST00000580283 CHGAP10645 457 aaKnown RBP14.22□□□□□ -0.13
PPP4R1-216ENST00000580283 EFCAB3Q8N7B9 438 aa14.19□□□□□ -0.14
PPP4R1-216ENST00000580283 PLCG2P16885 1265 aa14.18□□□□□ -0.14
PPP4R1-216ENST00000580283 HS6ST3Q8IZP7 471 aa14.18□□□□□ -0.14
PPP4R1-216ENST00000580283 NACADO15069 1562 aa14.17□□□□□ -0.14
PPP4R1-216ENST00000580283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.15□□□□□ -0.14
PPP4R1-216ENST00000580283 IRX5P78411 483 aaPredicted RBP14.14□□□□□ -0.15
PPP4R1-216ENST00000580283 OCEL1Q9H607 264 aa14.14□□□□□ -0.15
PPP4R1-216ENST00000580283 SOX12O15370 315 aa14.13□□□□□ -0.15
PPP4R1-216ENST00000580283 COLQQ9Y215 455 aaPredicted RBP14.13□□□□□ -0.15
PPP4R1-216ENST00000580283 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
PPP4R1-216ENST00000580283 POTEFA5A3E0 1075 aa14.09□□□□□ -0.15
PPP4R1-216ENST00000580283 LHX8Q68G74 356 aa14.07□□□□□ -0.16
PPP4R1-216ENST00000580283 NLRP6P59044 892 aa14.05□□□□□ -0.16
PPP4R1-216ENST00000580283 PHF8Q9UPP1 1060 aa14.05□□□□□ -0.16
PPP4R1-216ENST00000580283 PDCD7Q8N8D1 485 aaKnown RBP14.04□□□□□ -0.16
PPP4R1-216ENST00000580283 ILDR1Q86SU0 546 aaPredicted RBP14.01□□□□□ -0.17
PPP4R1-216ENST00000580283 POTEB2H3BUK9 544 aa14□□□□□ -0.17
PPP4R1-216ENST00000580283 MFRPQ9BY79 579 aa14□□□□□ -0.17
PPP4R1-216ENST00000580283 DNAJC5Q9H3Z4 198 aa14□□□□□ -0.17
PPP4R1-216ENST00000580283 G3V3G9 751 aa13.98□□□□□ -0.17
PPP4R1-216ENST00000580283 L3MBTL3Q96JM7 780 aaPredicted RBP13.98□□□□□ -0.17
PPP4R1-216ENST00000580283 DPY19L2Q6NUT2 758 aa13.96□□□□□ -0.17
PPP4R1-216ENST00000580283 FBXO22Q8NEZ5 403 aa13.96□□□□□ -0.17
PPP4R1-216ENST00000580283 MAMSTRQ6ZN01 415 aa13.95□□□□□ -0.18
PPP4R1-216ENST00000580283 MS4A4AQ96JQ5 239 aa13.94□□□□□ -0.18
PPP4R1-216ENST00000580283 RYDENQ9NUL5 291 aaKnown RBP13.94□□□□□ -0.18
PPP4R1-216ENST00000580283 NKX1-1Q15270 411 aaPredicted RBP13.93□□□□□ -0.18
PPP4R1-216ENST00000580283 BBXQ8WY36 941 aaPredicted RBP13.93□□□□□ -0.18
PPP4R1-216ENST00000580283 SCUBE2Q9NQ36 999 aa13.93□□□□□ -0.18
PPP4R1-216ENST00000580283 POTEJP0CG39 1038 aa13.9□□□□□ -0.18
PPP4R1-216ENST00000580283 BOLA1Q9Y3E2 137 aa13.9□□□□□ -0.18
PPP4R1-216ENST00000580283 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
PPP4R1-216ENST00000580283 C3orf67Q6ZVT6 689 aa13.87□□□□□ -0.19
PPP4R1-216ENST00000580283 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
PPP4R1-216ENST00000580283 MYO15BQ96JP2 1530 aa13.85□□□□□ -0.19
PPP4R1-216ENST00000580283 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.84□□□□□ -0.19
PPP4R1-216ENST00000580283 CECR2Q9BXF3 1484 aa13.84□□□□□ -0.19
PPP4R1-216ENST00000580283 OTUD5Q96G74 571 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms