RNA–Protein interactions for RNA: ENST00000579796.1

ARHGAP28-211, Transcript of Rho GTPase activating protein 28, humanhuman

Gene ARHGAP28, Length 1,960 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-211ENST00000579796 RNF25Q96BH1 459 aaPredicted RBP14.76□□□□□ -0.05
ARHGAP28-211ENST00000579796 POLA2Q14181 598 aa14.73□□□□□ -0.05
ARHGAP28-211ENST00000579796 ABCC9O60706 1549 aa14.72□□□□□ -0.05
ARHGAP28-211ENST00000579796 TRIM26Q12899 539 aaPredicted RBP14.72□□□□□ -0.05
ARHGAP28-211ENST00000579796 MIER1Q8N108 512 aa14.68□□□□□ -0.06
ARHGAP28-211ENST00000579796 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
ARHGAP28-211ENST00000579796 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.67□□□□□ -0.06
ARHGAP28-211ENST00000579796 CACNB1Q02641 598 aaPredicted RBP14.67□□□□□ -0.06
ARHGAP28-211ENST00000579796 LMOD2Q6P5Q4 547 aa14.66□□□□□ -0.06
ARHGAP28-211ENST00000579796 HRCP23327 699 aa14.61□□□□□ -0.07
ARHGAP28-211ENST00000579796 ABCB7O75027 752 aa14.57□□□□□ -0.08
ARHGAP28-211ENST00000579796 NPM2Q86SE8 214 aaKnown RBP14.55□□□□□ -0.08
ARHGAP28-211ENST00000579796 NEUROD2Q15784 382 aa14.54□□□□□ -0.08
ARHGAP28-211ENST00000579796 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
ARHGAP28-211ENST00000579796 DSG3P32926 999 aa14.51□□□□□ -0.09
ARHGAP28-211ENST00000579796 KCNV2Q8TDN2 545 aa14.5□□□□□ -0.09
ARHGAP28-211ENST00000579796 P3H3Q8IVL6 736 aa14.48□□□□□ -0.09
ARHGAP28-211ENST00000579796 ZBTB12Q9Y330 459 aaPredicted RBP14.44□□□□□ -0.1
ARHGAP28-211ENST00000579796 SLC24A3Q9HC58 644 aa14.43□□□□□ -0.1
ARHGAP28-211ENST00000579796 ZC3H15Q8WU90 426 aaKnown RBP14.43□□□□□ -0.1
ARHGAP28-211ENST00000579796 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
ARHGAP28-211ENST00000579796 STK25O00506 426 aa14.42□□□□□ -0.1
ARHGAP28-211ENST00000579796 RIOK3O14730 519 aaKnown RBP14.41□□□□□ -0.1
ARHGAP28-211ENST00000579796 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
ARHGAP28-211ENST00000579796 PABPN1Q86U42 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
ARHGAP28-211ENST00000579796 CADPS2Q86UW7 1296 aa14.34□□□□□ -0.11
ARHGAP28-211ENST00000579796 ZBTB47Q9UFB7 747 aaPredicted RBP14.34□□□□□ -0.11
ARHGAP28-211ENST00000579796 ZMYND15Q9H091 742 aa14.33□□□□□ -0.12
ARHGAP28-211ENST00000579796 SSUH2Q9Y2M2 353 aa14.32□□□□□ -0.12
ARHGAP28-211ENST00000579796 ARID3AQ99856 593 aa14.28□□□□□ -0.12
ARHGAP28-211ENST00000579796 GSE1Q14687 1217 aa14.27□□□□□ -0.13
ARHGAP28-211ENST00000579796 C1orf115Q9H7X2 142 aa14.27□□□□□ -0.13
ARHGAP28-211ENST00000579796 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
ARHGAP28-211ENST00000579796 RSPH6AQ9H0K4 717 aa14.25□□□□□ -0.13
ARHGAP28-211ENST00000579796 BCL11BQ9C0K0 894 aaPredicted RBP14.24□□□□□ -0.13
ARHGAP28-211ENST00000579796 VGFO15240 615 aaPredicted RBP14.23□□□□□ -0.13
ARHGAP28-211ENST00000579796 STK24Q9Y6E0 443 aa14.23□□□□□ -0.13
ARHGAP28-211ENST00000579796 NUBP1P53384 320 aa14.22□□□□□ -0.13
ARHGAP28-211ENST00000579796 WDR70Q9NW82 654 aa14.22□□□□□ -0.13
ARHGAP28-211ENST00000579796 NACADO15069 1562 aa14.2□□□□□ -0.14
ARHGAP28-211ENST00000579796 OSCARQ8IYS5 282 aa14.2□□□□□ -0.14
ARHGAP28-211ENST00000579796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
ARHGAP28-211ENST00000579796 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
ARHGAP28-211ENST00000579796 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
ARHGAP28-211ENST00000579796 DCAF1Q9Y4B6 1507 aa14.18□□□□□ -0.14
ARHGAP28-211ENST00000579796 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
ARHGAP28-211ENST00000579796 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
ARHGAP28-211ENST00000579796 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
ARHGAP28-211ENST00000579796 RYDENQ9NUL5 291 aaKnown RBP14.16□□□□□ -0.14
ARHGAP28-211ENST00000579796 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
ARHGAP28-211ENST00000579796 SEMA3EO15041 775 aa14.15□□□□□ -0.14
ARHGAP28-211ENST00000579796 ZMYND10O75800 440 aa14.15□□□□□ -0.14
ARHGAP28-211ENST00000579796 DCAF8Q5TAQ9 597 aa14.15□□□□□ -0.14
ARHGAP28-211ENST00000579796 GPBP1L1Q9HC44 474 aaPredicted RBP14.14□□□□□ -0.15
ARHGAP28-211ENST00000579796 SGIP1Q9BQI5 828 aa14.11□□□□□ -0.15
ARHGAP28-211ENST00000579796 TESPA1A2RU30 521 aaPredicted RBP14.09□□□□□ -0.15
ARHGAP28-211ENST00000579796 IL27Q8NEV9 243 aa14.09□□□□□ -0.15
ARHGAP28-211ENST00000579796 ARID3CA6NKF2 412 aa14.08□□□□□ -0.16
ARHGAP28-211ENST00000579796 ARHGEF1Q92888 912 aaKnown RBP14.07□□□□□ -0.16
ARHGAP28-211ENST00000579796 UNC13AQ9UPW8 1703 aa14.04□□□□□ -0.16
ARHGAP28-211ENST00000579796 NECTIN2Q92692 538 aa14.04□□□□□ -0.16
ARHGAP28-211ENST00000579796 MKRN3Q13064 507 aaKnown RBP13.99□□□□□ -0.17
ARHGAP28-211ENST00000579796 BARGINQ6ZT62 677 aa13.98□□□□□ -0.17
ARHGAP28-211ENST00000579796 CHRM1P11229 460 aaPredicted RBP13.98□□□□□ -0.17
ARHGAP28-211ENST00000579796 APBB1O00213 710 aa13.96□□□□□ -0.17
ARHGAP28-211ENST00000579796 CCDC9Q9Y3X0 531 aaKnown RBP13.96□□□□□ -0.17
ARHGAP28-211ENST00000579796 SCRIBQ14160 1630 aa13.94□□□□□ -0.18
ARHGAP28-211ENST00000579796 KDM4CQ9H3R0 1056 aa13.94□□□□□ -0.18
ARHGAP28-211ENST00000579796 E2F4Q16254 413 aa13.93□□□□□ -0.18
ARHGAP28-211ENST00000579796 PDIA4P13667 645 aaKnown RBP13.92□□□□□ -0.18
ARHGAP28-211ENST00000579796 ZBTB7CA1YPR0 619 aa13.92□□□□□ -0.18
ARHGAP28-211ENST00000579796 FAM212AQ96EL1 285 aa13.91□□□□□ -0.18
ARHGAP28-211ENST00000579796 AK7Q96M32 723 aa13.89□□□□□ -0.19
ARHGAP28-211ENST00000579796 PYGBP11216 843 aa13.88□□□□□ -0.19
ARHGAP28-211ENST00000579796 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
ARHGAP28-211ENST00000579796 RASEFQ8IZ41 740 aa13.86□□□□□ -0.19
ARHGAP28-211ENST00000579796 BICRAQ9NZM4 1560 aa13.85□□□□□ -0.19
ARHGAP28-211ENST00000579796 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
ARHGAP28-211ENST00000579796 LOC105371045A0A1W2PR82 267 aa13.8□□□□□ -0.2
ARHGAP28-211ENST00000579796 MFRPQ9BY79 579 aa13.8□□□□□ -0.2
ARHGAP28-211ENST00000579796 PPP1R37O75864 691 aa13.79□□□□□ -0.2
ARHGAP28-211ENST00000579796 TRIM66O15016 1216 aa13.77□□□□□ -0.21
ARHGAP28-211ENST00000579796 PDE4DQ08499 809 aa13.77□□□□□ -0.21
ARHGAP28-211ENST00000579796 CCDC82Q8N4S0 544 aa13.77□□□□□ -0.21
ARHGAP28-211ENST00000579796 FAM117AQ9C073 453 aa13.77□□□□□ -0.21
ARHGAP28-211ENST00000579796 RBM26Q5T8P6 1007 aaKnown RBP13.76□□□□□ -0.21
ARHGAP28-211ENST00000579796 SMYD5Q6GMV2 418 aa13.74□□□□□ -0.21
ARHGAP28-211ENST00000579796 KRI1Q8N9T8 703 aaKnown RBP13.74□□□□□ -0.21
ARHGAP28-211ENST00000579796 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
ARHGAP28-211ENST00000579796 SHROOM4Q9ULL8 1493 aa13.73□□□□□ -0.21
ARHGAP28-211ENST00000579796 ZNF316A6NFI3 1004 aaPredicted RBP13.69□□□□□ -0.22
ARHGAP28-211ENST00000579796 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
ARHGAP28-211ENST00000579796 CREBZFQ9NS37 354 aa13.68□□□□□ -0.22
ARHGAP28-211ENST00000579796 NCKAP5LQ9HCH0 1330 aa13.68□□□□□ -0.22
ARHGAP28-211ENST00000579796 GPIHBP1Q8IV16 184 aa13.67□□□□□ -0.22
ARHGAP28-211ENST00000579796 KCTD17Q8N5Z5 321 aa13.67□□□□□ -0.22
ARHGAP28-211ENST00000579796 ONECUT3O60422 494 aaPredicted RBP13.67□□□□□ -0.22
ARHGAP28-211ENST00000579796 CLUAP1Q96AJ1 413 aa13.67□□□□□ -0.22
ARHGAP28-211ENST00000579796 MLLT3P42568 568 aaPredicted RBP13.65□□□□□ -0.22
ARHGAP28-211ENST00000579796 FLIIQ13045 1269 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms