RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 WRNQ14191 1432 aaPredicted RBP eCLIP24.14■■□□□ 1.45
CDK5RAP3-213ENST00000579605 KDM6BO15054 1643 aa24.06■■□□□ 1.44
CDK5RAP3-213ENST00000579605 DIP2BQ9P265 1576 aa24.03■■□□□ 1.44
CDK5RAP3-213ENST00000579605 MAPKBP1O60336 1514 aa24.01■■□□□ 1.43
CDK5RAP3-213ENST00000579605 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
CDK5RAP3-213ENST00000579605 TSPOAP1O95153 1857 aa23.94■■□□□ 1.42
CDK5RAP3-213ENST00000579605 TTBK1Q5TCY1 1321 aaPredicted RBP23.93■■□□□ 1.42
CDK5RAP3-213ENST00000579605 ADCY10Q96PN6 1610 aa23.93■■□□□ 1.42
CDK5RAP3-213ENST00000579605 TOP2BQ02880 1626 aa23.86■■□□□ 1.41
CDK5RAP3-213ENST00000579605 ADGRL1O94910 1474 aa23.86■■□□□ 1.41
CDK5RAP3-213ENST00000579605 RUSC2Q8N2Y8 1516 aa23.85■■□□□ 1.41
CDK5RAP3-213ENST00000579605 SUPT5HO00267 1087 aaKnown RBP23.83■■□□□ 1.41
CDK5RAP3-213ENST00000579605 BIVM-ERCC5R4GMW8 1640 aa23.82■■□□□ 1.4
CDK5RAP3-213ENST00000579605 PTPRGP23470 1445 aa23.76■■□□□ 1.39
CDK5RAP3-213ENST00000579605 HECW2Q9P2P5 1572 aa23.74■■□□□ 1.39
CDK5RAP3-213ENST00000579605 KIAA0586Q9BVV6 1533 aa23.73■■□□□ 1.39
CDK5RAP3-213ENST00000579605 ASXL2Q76L83 1435 aa23.69■■□□□ 1.38
CDK5RAP3-213ENST00000579605 COL17A1Q9UMD9 1497 aaPredicted RBP23.67■■□□□ 1.38
CDK5RAP3-213ENST00000579605 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
CDK5RAP3-213ENST00000579605 ABCC2Q92887 1545 aa23.64■■□□□ 1.37
CDK5RAP3-213ENST00000579605 IGF1RP08069 1367 aa23.62■■□□□ 1.37
CDK5RAP3-213ENST00000579605 PPRC1Q5VV67 1664 aaKnown RBP23.61■■□□□ 1.37
CDK5RAP3-213ENST00000579605 TNIKQ9UKE5 1360 aa23.61■■□□□ 1.37
CDK5RAP3-213ENST00000579605 FBXO41Q8TF61 875 aa23.59■■□□□ 1.37
CDK5RAP3-213ENST00000579605 GLI2P10070 1586 aa23.59■■□□□ 1.37
CDK5RAP3-213ENST00000579605 CARMIL2Q6F5E8 1435 aa23.57■■□□□ 1.36
CDK5RAP3-213ENST00000579605 EPRSP07814 1512 aaKnown RBP23.51■■□□□ 1.35
CDK5RAP3-213ENST00000579605 UACAQ9BZF9 1416 aa23.5■■□□□ 1.35
CDK5RAP3-213ENST00000579605 TEX14Q8IWB6 1497 aa23.49■■□□□ 1.35
CDK5RAP3-213ENST00000579605 KIF27Q86VH2 1401 aa23.49■■□□□ 1.35
CDK5RAP3-213ENST00000579605 CUL7Q14999 1698 aa23.48■■□□□ 1.35
CDK5RAP3-213ENST00000579605 UHRF1BP1LA0JNW5 1464 aa23.47■■□□□ 1.35
CDK5RAP3-213ENST00000579605 CARMIL1Q5VZK9 1371 aa23.45■■□□□ 1.34
CDK5RAP3-213ENST00000579605 MAP3K4Q9Y6R4 1608 aa23.42■■□□□ 1.34
CDK5RAP3-213ENST00000579605 KDM5BQ9UGL1 1544 aa23.38■■□□□ 1.33
CDK5RAP3-213ENST00000579605 KCNH8Q96L42 1107 aa23.37■■□□□ 1.33
CDK5RAP3-213ENST00000579605 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
CDK5RAP3-213ENST00000579605 DISP1Q96F81 1524 aa23.34■■□□□ 1.33
CDK5RAP3-213ENST00000579605 ZCCHC11Q5TAX3 1644 aaKnown RBP23.31■■□□□ 1.32
CDK5RAP3-213ENST00000579605 CD109Q6YHK3 1445 aa23.31■■□□□ 1.32
CDK5RAP3-213ENST00000579605 WDR7Q9Y4E6 1490 aa23.29■■□□□ 1.32
CDK5RAP3-213ENST00000579605 MAGI3Q5TCQ9 1506 aa23.22■■□□□ 1.31
CDK5RAP3-213ENST00000579605 KIF21BO75037 1637 aa23.22■■□□□ 1.31
CDK5RAP3-213ENST00000579605 LMTK3Q96Q04 1460 aa23.19■■□□□ 1.3
CDK5RAP3-213ENST00000579605 PTPRMP28827 1452 aa23.17■■□□□ 1.3
CDK5RAP3-213ENST00000579605 UGGT2Q9NYU1 1516 aa23.17■■□□□ 1.3
CDK5RAP3-213ENST00000579605 KIAA0556O60303 1618 aa23.14■■□□□ 1.29
CDK5RAP3-213ENST00000579605 ARID4BQ4LE39 1312 aaPredicted RBP23.13■■□□□ 1.29
CDK5RAP3-213ENST00000579605 ARID3CA6NKF2 412 aa23.12■■□□□ 1.29
CDK5RAP3-213ENST00000579605 CFAP43Q8NDM7 1665 aa23.1■■□□□ 1.29
CDK5RAP3-213ENST00000579605 RAPGEF3O95398 923 aa23.09■■□□□ 1.29
CDK5RAP3-213ENST00000579605 PLPPR3Q6T4P5 718 aa23.09■■□□□ 1.29
CDK5RAP3-213ENST00000579605 RAPGEF2Q9Y4G8 1499 aa23.09■■□□□ 1.29
CDK5RAP3-213ENST00000579605 HSPA2P54652 639 aa23.06■■□□□ 1.28
CDK5RAP3-213ENST00000579605 ARAP3Q8WWN8 1544 aa23.05■■□□□ 1.28
CDK5RAP3-213ENST00000579605 ADAMTSL3P82987 1691 aa23.03■■□□□ 1.28
CDK5RAP3-213ENST00000579605 PCF11O94913 1555 aaKnown RBP23.03■■□□□ 1.28
CDK5RAP3-213ENST00000579605 ILDR2Q71H61 639 aa23.02■■□□□ 1.28
CDK5RAP3-213ENST00000579605 CERKQ8TCT0 537 aa23.01■■□□□ 1.27
CDK5RAP3-213ENST00000579605 DISP3Q9P2K9 1392 aa22.99■■□□□ 1.27
CDK5RAP3-213ENST00000579605 ABCA8O94911 1581 aa22.98■■□□□ 1.27
CDK5RAP3-213ENST00000579605 SOCS7O14512 581 aa22.96■■□□□ 1.27
CDK5RAP3-213ENST00000579605 GOLGA3Q08378 1498 aa22.95■■□□□ 1.26
CDK5RAP3-213ENST00000579605 P3H3Q8IVL6 736 aa22.95■■□□□ 1.26
CDK5RAP3-213ENST00000579605 MADDQ8WXG6 1647 aa22.94■■□□□ 1.26
CDK5RAP3-213ENST00000579605 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
CDK5RAP3-213ENST00000579605 FAM9AQ8IZU1 332 aaPredicted RBP22.93■■□□□ 1.26
CDK5RAP3-213ENST00000579605 BCORL1Q5H9F3 1711 aa22.91■■□□□ 1.26
CDK5RAP3-213ENST00000579605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.89■■□□□ 1.25
CDK5RAP3-213ENST00000579605 HNRNPUL2Q1KMD3 747 aaKnown RBP22.89■■□□□ 1.25
CDK5RAP3-213ENST00000579605 ATP10BO94823 1461 aa22.89■■□□□ 1.25
CDK5RAP3-213ENST00000579605 RIMS1Q86UR5 1692 aaKnown RBP22.84■■□□□ 1.25
CDK5RAP3-213ENST00000579605 MLECQ14165 292 aa22.83■■□□□ 1.25
CDK5RAP3-213ENST00000579605 NEO1Q92859 1461 aa22.83■■□□□ 1.25
CDK5RAP3-213ENST00000579605 ABCA9Q8IUA7 1624 aa22.8■■□□□ 1.24
CDK5RAP3-213ENST00000579605 CTTNBP2Q8WZ74 1663 aa22.78■■□□□ 1.24
CDK5RAP3-213ENST00000579605 FRMPD1Q5SYB0 1578 aa22.78■■□□□ 1.24
CDK5RAP3-213ENST00000579605 POGZQ7Z3K3 1410 aa22.74■■□□□ 1.23
CDK5RAP3-213ENST00000579605 DENND4BO75064 1496 aaPredicted RBP22.73■■□□□ 1.23
CDK5RAP3-213ENST00000579605 AKNAQ7Z591 1439 aa22.7■■□□□ 1.22
CDK5RAP3-213ENST00000579605 ARHGEF40Q8TER5 1519 aa22.7■■□□□ 1.22
CDK5RAP3-213ENST00000579605 FANCAO15360 1455 aa22.68■■□□□ 1.22
CDK5RAP3-213ENST00000579605 CEBPAP49715 358 aaPredicted RBP22.67■■□□□ 1.22
CDK5RAP3-213ENST00000579605 YEATS2Q9ULM3 1422 aa22.66■■□□□ 1.22
CDK5RAP3-213ENST00000579605 PLEKHD1A6NEE1 506 aa22.65■■□□□ 1.22
CDK5RAP3-213ENST00000579605 RANGAP1P46060 587 aaPredicted RBP22.65■■□□□ 1.22
CDK5RAP3-213ENST00000579605 FHOD3Q2V2M9 1422 aa22.65■■□□□ 1.22
CDK5RAP3-213ENST00000579605 DMRT2Q9Y5R5 561 aa22.64■■□□□ 1.21
CDK5RAP3-213ENST00000579605 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
CDK5RAP3-213ENST00000579605 ZFYVE16Q7Z3T8 1539 aa22.59■■□□□ 1.21
CDK5RAP3-213ENST00000579605 RAPGEF6Q8TEU7 1601 aa22.59■■□□□ 1.21
CDK5RAP3-213ENST00000579605 RICTORQ6R327 1708 aa22.59■■□□□ 1.21
CDK5RAP3-213ENST00000579605 SPATA31D1Q6ZQQ2 1576 aa22.59■■□□□ 1.21
CDK5RAP3-213ENST00000579605 SIGLEC1Q9BZZ2 1709 aa22.57■■□□□ 1.2
CDK5RAP3-213ENST00000579605 NUP153P49790 1475 aaKnown RBP22.55■■□□□ 1.2
CDK5RAP3-213ENST00000579605 EFCAB5A4FU69 1503 aa22.54■■□□□ 1.2
CDK5RAP3-213ENST00000579605 FER1L4A9Z1Z3 1794 aa22.52■■□□□ 1.2
CDK5RAP3-213ENST00000579605 ZMYM4Q5VZL5 1548 aa22.52■■□□□ 1.19
CDK5RAP3-213ENST00000579605 TTC37Q6PGP7 1564 aa22.51■■□□□ 1.19
CDK5RAP3-213ENST00000579605 MAGI2Q86UL8 1455 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms