RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 TOP2BQ02880 1626 aa15.87■□□□□ 0.13
BRIP1-204ENST00000579028 PRG4Q92954 1404 aaPredicted RBP15.85■□□□□ 0.13
BRIP1-204ENST00000579028 ABCC10Q5T3U5 1492 aa15.83■□□□□ 0.12
BRIP1-204ENST00000579028 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
BRIP1-204ENST00000579028 MAPKBP1O60336 1514 aa15.8■□□□□ 0.12
BRIP1-204ENST00000579028 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
BRIP1-204ENST00000579028 FAM69CQ0P6D2 419 aa15.78■□□□□ 0.12
BRIP1-204ENST00000579028 DIP2BQ9P265 1576 aa15.77■□□□□ 0.11
BRIP1-204ENST00000579028 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
BRIP1-204ENST00000579028 ADCY10Q96PN6 1610 aa15.74■□□□□ 0.11
BRIP1-204ENST00000579028 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
BRIP1-204ENST00000579028 KDM6BO15054 1643 aa15.72■□□□□ 0.11
BRIP1-204ENST00000579028 KDM4FA0A1W2PPD8 638 aa15.7■□□□□ 0.1
BRIP1-204ENST00000579028 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
BRIP1-204ENST00000579028 KIAA0586Q9BVV6 1533 aa15.66■□□□□ 0.1
BRIP1-204ENST00000579028 TSPOAP1O95153 1857 aa15.64■□□□□ 0.09
BRIP1-204ENST00000579028 CUL7Q14999 1698 aa15.58■□□□□ 0.08
BRIP1-204ENST00000579028 IGF1RP08069 1367 aa15.58■□□□□ 0.08
BRIP1-204ENST00000579028 ILDR1Q86SU0 546 aaPredicted RBP15.56■□□□□ 0.08
BRIP1-204ENST00000579028 PTPRGP23470 1445 aa15.56■□□□□ 0.08
BRIP1-204ENST00000579028 PPRC1Q5VV67 1664 aaKnown RBP15.54■□□□□ 0.08
BRIP1-204ENST00000579028 GLI2P10070 1586 aa15.54■□□□□ 0.08
BRIP1-204ENST00000579028 ABCC2Q92887 1545 aa15.54■□□□□ 0.08
BRIP1-204ENST00000579028 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
BRIP1-204ENST00000579028 PLB1Q6P1J6 1458 aa15.52■□□□□ 0.08
BRIP1-204ENST00000579028 ASXL2Q76L83 1435 aa15.51■□□□□ 0.07
BRIP1-204ENST00000579028 TNIKQ9UKE5 1360 aa15.51■□□□□ 0.07
BRIP1-204ENST00000579028 ADGRL1O94910 1474 aa15.5■□□□□ 0.07
BRIP1-204ENST00000579028 CARMIL2Q6F5E8 1435 aa15.5■□□□□ 0.07
BRIP1-204ENST00000579028 UHRF1BP1LA0JNW5 1464 aa15.49■□□□□ 0.07
BRIP1-204ENST00000579028 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.07
BRIP1-204ENST00000579028 IQGAP2Q13576 1575 aa15.45■□□□□ 0.06
BRIP1-204ENST00000579028 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
BRIP1-204ENST00000579028 COL17A1Q9UMD9 1497 aaPredicted RBP15.45■□□□□ 0.06
BRIP1-204ENST00000579028 TTBK1Q5TCY1 1321 aaPredicted RBP15.44■□□□□ 0.06
BRIP1-204ENST00000579028 UACAQ9BZF9 1416 aa15.44■□□□□ 0.06
BRIP1-204ENST00000579028 MAP3K4Q9Y6R4 1608 aa15.44■□□□□ 0.06
BRIP1-204ENST00000579028 EPRSP07814 1512 aaKnown RBP15.43■□□□□ 0.06
BRIP1-204ENST00000579028 KDM5BQ9UGL1 1544 aa15.42■□□□□ 0.06
BRIP1-204ENST00000579028 DISP1Q96F81 1524 aa15.41■□□□□ 0.06
BRIP1-204ENST00000579028 TEX14Q8IWB6 1497 aa15.4■□□□□ 0.06
BRIP1-204ENST00000579028 HECW2Q9P2P5 1572 aa15.4■□□□□ 0.06
BRIP1-204ENST00000579028 ZCCHC11Q5TAX3 1644 aaKnown RBP15.37■□□□□ 0.05
BRIP1-204ENST00000579028 ADRA2BP18089 450 aa15.37■□□□□ 0.05
BRIP1-204ENST00000579028 UGGT2Q9NYU1 1516 aa15.36■□□□□ 0.05
BRIP1-204ENST00000579028 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.04
BRIP1-204ENST00000579028 KIAA0556O60303 1618 aa15.32■□□□□ 0.04
BRIP1-204ENST00000579028 MSH5O43196 834 aa15.32■□□□□ 0.04
BRIP1-204ENST00000579028 WDR7Q9Y4E6 1490 aa15.32■□□□□ 0.04
BRIP1-204ENST00000579028 RAPGEF2Q9Y4G8 1499 aa15.29■□□□□ 0.04
BRIP1-204ENST00000579028 MAGI3Q5TCQ9 1506 aa15.28■□□□□ 0.04
BRIP1-204ENST00000579028 CFAP43Q8NDM7 1665 aa15.26■□□□□ 0.03
BRIP1-204ENST00000579028 CD109Q6YHK3 1445 aa15.25■□□□□ 0.03
BRIP1-204ENST00000579028 ABCA8O94911 1581 aa15.22■□□□□ 0.03
BRIP1-204ENST00000579028 KIF21BO75037 1637 aa15.2■□□□□ 0.02
BRIP1-204ENST00000579028 CTTNBP2Q8WZ74 1663 aa15.19■□□□□ 0.02
BRIP1-204ENST00000579028 GOLGA3Q08378 1498 aa15.18■□□□□ 0.02
BRIP1-204ENST00000579028 FBXO41Q8TF61 875 aa15.17■□□□□ 0.02
BRIP1-204ENST00000579028 ARAP3Q8WWN8 1544 aa15.17■□□□□ 0.02
BRIP1-204ENST00000579028 KCNH8Q96L42 1107 aa15.16■□□□□ 0.02
BRIP1-204ENST00000579028 ADAMTSL3P82987 1691 aa15.12■□□□□ 0.01
BRIP1-204ENST00000579028 PHLDB1Q86UU1 1377 aa15.11■□□□□ 0.01
BRIP1-204ENST00000579028 PTPRMP28827 1452 aa15.1■□□□□ 0.01
BRIP1-204ENST00000579028 ABCA9Q8IUA7 1624 aa15.08■□□□□ 0
BRIP1-204ENST00000579028 ATP10BO94823 1461 aa15.07■□□□□ 0
BRIP1-204ENST00000579028 PRXQ9BXM0 1461 aa15.06■□□□□ 0
BRIP1-204ENST00000579028 BCORL1Q5H9F3 1711 aa15.04■□□□□ -0
BRIP1-204ENST00000579028 NEO1Q92859 1461 aa15.04■□□□□ -0
BRIP1-204ENST00000579028 PCF11O94913 1555 aaKnown RBP15.03■□□□□ -0
BRIP1-204ENST00000579028 FRMPD1Q5SYB0 1578 aa15.02■□□□□ -0
BRIP1-204ENST00000579028 MADDQ8WXG6 1647 aa15.02□□□□□ -0.01
BRIP1-204ENST00000579028 LMTK3Q96Q04 1460 aa15.01□□□□□ -0.01
BRIP1-204ENST00000579028 RAPGEF3O95398 923 aa15.01□□□□□ -0.01
BRIP1-204ENST00000579028 FAM9AQ8IZU1 332 aaPredicted RBP15.01□□□□□ -0.01
BRIP1-204ENST00000579028 ARID3CA6NKF2 412 aa15□□□□□ -0.01
BRIP1-204ENST00000579028 RAPGEF6Q8TEU7 1601 aa14.97□□□□□ -0.01
BRIP1-204ENST00000579028 SAMD9Q5K651 1589 aa14.96□□□□□ -0.01
BRIP1-204ENST00000579028 P3H3Q8IVL6 736 aa14.96□□□□□ -0.01
BRIP1-204ENST00000579028 ARHGEF40Q8TER5 1519 aa14.96□□□□□ -0.02
BRIP1-204ENST00000579028 ARID4BQ4LE39 1312 aaPredicted RBP14.95□□□□□ -0.02
BRIP1-204ENST00000579028 RIMS1Q86UR5 1692 aaKnown RBP14.94□□□□□ -0.02
BRIP1-204ENST00000579028 RICTORQ6R327 1708 aa14.93□□□□□ -0.02
BRIP1-204ENST00000579028 DENND4BO75064 1496 aaPredicted RBP14.92□□□□□ -0.02
BRIP1-204ENST00000579028 NUP153P49790 1475 aaKnown RBP14.91□□□□□ -0.02
BRIP1-204ENST00000579028 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
BRIP1-204ENST00000579028 FHOD3Q2V2M9 1422 aa14.91□□□□□ -0.02
BRIP1-204ENST00000579028 ZMYM4Q5VZL5 1548 aa14.89□□□□□ -0.03
BRIP1-204ENST00000579028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.89□□□□□ -0.03
BRIP1-204ENST00000579028 HNRNPUL2Q1KMD3 747 aaKnown RBP14.89□□□□□ -0.03
BRIP1-204ENST00000579028 CFAP74Q9C0B2 1584 aa14.89□□□□□ -0.03
BRIP1-204ENST00000579028 HSPA2P54652 639 aa14.88□□□□□ -0.03
BRIP1-204ENST00000579028 AKNAQ7Z591 1439 aa14.88□□□□□ -0.03
BRIP1-204ENST00000579028 FANCAO15360 1455 aa14.88□□□□□ -0.03
BRIP1-204ENST00000579028 POGZQ7Z3K3 1410 aa14.87□□□□□ -0.03
BRIP1-204ENST00000579028 EFCAB5A4FU69 1503 aa14.86□□□□□ -0.03
BRIP1-204ENST00000579028 SIGLEC1Q9BZZ2 1709 aa14.86□□□□□ -0.03
BRIP1-204ENST00000579028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.85□□□□□ -0.03
BRIP1-204ENST00000579028 MAGI2Q86UL8 1455 aa14.84□□□□□ -0.03
BRIP1-204ENST00000579028 ZFYVE16Q7Z3T8 1539 aa14.84□□□□□ -0.03
BRIP1-204ENST00000579028 PLEKHD1A6NEE1 506 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms