RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 TPRNQ4KMQ1 711 aa11.81□□□□□ -0.52
CDH8-203ENST00000577390 MIER1Q8N108 512 aa11.8□□□□□ -0.52
CDH8-203ENST00000577390 ISY1Q9ULR0 285 aaKnown RBP11.79□□□□□ -0.52
CDH8-203ENST00000577390 RBM19Q9Y4C8 960 aaKnown RBP11.78□□□□□ -0.52
CDH8-203ENST00000577390 RSPH6AQ9H0K4 717 aa11.78□□□□□ -0.52
CDH8-203ENST00000577390 NOP58Q9Y2X3 529 aaKnown RBP11.77□□□□□ -0.52
CDH8-203ENST00000577390 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.52
CDH8-203ENST00000577390 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
CDH8-203ENST00000577390 NCLP19338 710 aaKnown RBP11.72□□□□□ -0.53
CDH8-203ENST00000577390 TNNT2P45379 298 aaPredicted RBP11.72□□□□□ -0.53
CDH8-203ENST00000577390 MYH16Q9H6N6 1097 aa11.71□□□□□ -0.53
CDH8-203ENST00000577390 ANP32CO43423 234 aa11.71□□□□□ -0.54
CDH8-203ENST00000577390 AMER1Q5JTC6 1135 aaPredicted RBP11.7□□□□□ -0.54
CDH8-203ENST00000577390 PDE4CQ08493 712 aa11.69□□□□□ -0.54
CDH8-203ENST00000577390 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
CDH8-203ENST00000577390 DNTTIP2Q5QJE6 756 aaKnown RBP11.66□□□□□ -0.54
CDH8-203ENST00000577390 NOC3LQ8WTT2 800 aaKnown RBP11.65□□□□□ -0.54
CDH8-203ENST00000577390 ARID3CA6NKF2 412 aa11.65□□□□□ -0.55
CDH8-203ENST00000577390 SALL2Q9Y467 1007 aaPredicted RBP11.65□□□□□ -0.55
CDH8-203ENST00000577390 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
CDH8-203ENST00000577390 FANCIQ9NVI1 1328 aa11.63□□□□□ -0.55
CDH8-203ENST00000577390 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
CDH8-203ENST00000577390 ZNF777Q9ULD5 760 aaPredicted RBP11.61□□□□□ -0.55
CDH8-203ENST00000577390 NAP1L2Q9ULW6 460 aaPredicted RBP11.61□□□□□ -0.55
CDH8-203ENST00000577390 PTMAP06454 111 aaKnown RBP11.61□□□□□ -0.55
CDH8-203ENST00000577390 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDH8-203ENST00000577390 LMOD2Q6P5Q4 547 aa11.6□□□□□ -0.55
CDH8-203ENST00000577390 PPM1GO15355 546 aaPredicted RBP11.59□□□□□ -0.55
CDH8-203ENST00000577390 HSP90AA2PQ14568 343 aaPredicted RBP11.59□□□□□ -0.55
CDH8-203ENST00000577390 KIAA2012Q0VF49 1180 aa11.56□□□□□ -0.56
CDH8-203ENST00000577390 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.56□□□□□ -0.56
CDH8-203ENST00000577390 TMX4Q9H1E5 349 aaPredicted RBP11.56□□□□□ -0.56
CDH8-203ENST00000577390 PLCB2Q00722 1185 aa11.55□□□□□ -0.56
CDH8-203ENST00000577390 A0A0U1RQG5 324 aaPredicted RBP11.55□□□□□ -0.56
CDH8-203ENST00000577390 FGD1P98174 961 aa11.55□□□□□ -0.56
CDH8-203ENST00000577390 GOLGA6L6A8MZA4 724 aa11.54□□□□□ -0.56
CDH8-203ENST00000577390 PNNQ9H307 717 aaKnown RBP11.54□□□□□ -0.56
CDH8-203ENST00000577390 ARID4BQ4LE39 1312 aaPredicted RBP11.54□□□□□ -0.56
CDH8-203ENST00000577390 DDRGK1Q96HY6 314 aa11.53□□□□□ -0.56
CDH8-203ENST00000577390 USP35Q9P2H5 1018 aa11.52□□□□□ -0.57
CDH8-203ENST00000577390 WWC1Q8IX03 1113 aa11.51□□□□□ -0.57
CDH8-203ENST00000577390 PPP1R15AO75807 674 aaPredicted RBP11.51□□□□□ -0.57
CDH8-203ENST00000577390 DCAF8L1A6NGE4 600 aa11.49□□□□□ -0.57
CDH8-203ENST00000577390 L1TD1Q5T7N2 865 aaKnown RBP11.47□□□□□ -0.57
CDH8-203ENST00000577390 CHAF1AQ13111 956 aaPredicted RBP11.47□□□□□ -0.57
CDH8-203ENST00000577390 CASC1Q6TDU7 716 aa11.47□□□□□ -0.57
CDH8-203ENST00000577390 GOLGA6L22H0YM25 854 aa11.47□□□□□ -0.57
CDH8-203ENST00000577390 G3V3G9 751 aa11.46□□□□□ -0.57
CDH8-203ENST00000577390 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
CDH8-203ENST00000577390 NRDCO43847 1150 aa11.45□□□□□ -0.58
CDH8-203ENST00000577390 LAS1LQ9Y4W2 734 aaKnown RBP11.45□□□□□ -0.58
CDH8-203ENST00000577390 WDR43Q15061 677 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDH8-203ENST00000577390 OS9Q13438 667 aaPredicted RBP11.43□□□□□ -0.58
CDH8-203ENST00000577390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.43□□□□□ -0.58
CDH8-203ENST00000577390 KCNJ4P48050 445 aa11.43□□□□□ -0.58
CDH8-203ENST00000577390 GNL2Q13823 731 aaKnown RBP11.43□□□□□ -0.58
CDH8-203ENST00000577390 PPP4R2Q9NY27 417 aa11.42□□□□□ -0.58
CDH8-203ENST00000577390 TIMELESSQ9UNS1 1208 aa11.42□□□□□ -0.58
CDH8-203ENST00000577390 HNRNPUQ00839 825 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDH8-203ENST00000577390 VPS53Q5VIR6 699 aa11.4□□□□□ -0.59
CDH8-203ENST00000577390 IPO9Q96P70 1041 aaKnown RBP11.39□□□□□ -0.59
CDH8-203ENST00000577390 CEP89Q96ST8 783 aa11.39□□□□□ -0.59
CDH8-203ENST00000577390 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDH8-203ENST00000577390 PHF23Q9BUL5 403 aaPredicted RBP11.38□□□□□ -0.59
CDH8-203ENST00000577390 RRP9O43818 475 aaKnown RBP11.37□□□□□ -0.59
CDH8-203ENST00000577390 CCDC9Q9Y3X0 531 aaKnown RBP11.36□□□□□ -0.59
CDH8-203ENST00000577390 DRC7Q8IY82 874 aa11.36□□□□□ -0.59
CDH8-203ENST00000577390 CALRP27797 417 aaKnown RBP11.35□□□□□ -0.59
CDH8-203ENST00000577390 IRX6P78412 446 aaPredicted RBP11.35□□□□□ -0.59
CDH8-203ENST00000577390 CWC22Q9HCG8 908 aaKnown RBP11.35□□□□□ -0.59
CDH8-203ENST00000577390 IL27Q8NEV9 243 aa11.34□□□□□ -0.59
CDH8-203ENST00000577390 TRHP20396 242 aaPredicted RBP11.34□□□□□ -0.59
CDH8-203ENST00000577390 GOLGA6L4A6NEF3 574 aa11.33□□□□□ -0.6
CDH8-203ENST00000577390 BECN1Q14457 450 aa11.33□□□□□ -0.6
CDH8-203ENST00000577390 FAM9BQ8IZU0 186 aa11.32□□□□□ -0.6
CDH8-203ENST00000577390 AK7Q96M32 723 aa11.32□□□□□ -0.6
CDH8-203ENST00000577390 ZNF330Q9Y3S2 320 aaPredicted RBP11.32□□□□□ -0.6
CDH8-203ENST00000577390 WDR70Q9NW82 654 aa11.31□□□□□ -0.6
CDH8-203ENST00000577390 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
CDH8-203ENST00000577390 TMC1Q8TDI8 760 aa11.31□□□□□ -0.6
CDH8-203ENST00000577390 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
CDH8-203ENST00000577390 GSE1Q14687 1217 aa11.3□□□□□ -0.6
CDH8-203ENST00000577390 ZMYND15Q9H091 742 aa11.3□□□□□ -0.6
CDH8-203ENST00000577390 TCEAL9Q9UHQ7 104 aa11.3□□□□□ -0.6
CDH8-203ENST00000577390 AEBP2Q6ZN18 517 aaPredicted RBP11.29□□□□□ -0.6
CDH8-203ENST00000577390 CREBRFQ8IUR6 639 aa11.29□□□□□ -0.6
CDH8-203ENST00000577390 P3H3Q8IVL6 736 aa11.29□□□□□ -0.6
CDH8-203ENST00000577390 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDH8-203ENST00000577390 PTMSP20962 102 aa11.28□□□□□ -0.6
CDH8-203ENST00000577390 FAM43AQ8N2R8 423 aa11.28□□□□□ -0.6
CDH8-203ENST00000577390 EEA1Q15075 1411 aa11.28□□□□□ -0.6
CDH8-203ENST00000577390 PDIA4P13667 645 aaKnown RBP11.27□□□□□ -0.61
CDH8-203ENST00000577390 FTSJ3Q8IY81 847 aaKnown RBP11.26□□□□□ -0.61
CDH8-203ENST00000577390 PAF1Q8N7H5 531 aa11.26□□□□□ -0.61
CDH8-203ENST00000577390 PPM1FP49593 454 aaPredicted RBP11.26□□□□□ -0.61
CDH8-203ENST00000577390 NEUROD2Q15784 382 aa11.25□□□□□ -0.61
CDH8-203ENST00000577390 RASSF8Q8NHQ8 419 aa11.25□□□□□ -0.61
CDH8-203ENST00000577390 TAF7LQ5H9L4 462 aa11.25□□□□□ -0.61
CDH8-203ENST00000577390 DDX10Q13206 875 aaKnown RBP11.24□□□□□ -0.61
CDH8-203ENST00000577390 KDM2AQ9Y2K7 1162 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms