RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 FAM69CQ0P6D2 419 aa19.04■□□□□ 0.64
CALCOCO2-228ENST00000576582 KIF13AQ9H1H9 1805 aa19.01■□□□□ 0.63
CALCOCO2-228ENST00000576582 ABCC10Q5T3U5 1492 aa19■□□□□ 0.63
CALCOCO2-228ENST00000576582 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
CALCOCO2-228ENST00000576582 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
CALCOCO2-228ENST00000576582 KIAA0586Q9BVV6 1533 aa18.93■□□□□ 0.62
CALCOCO2-228ENST00000576582 IGF1RP08069 1367 aa18.91■□□□□ 0.62
CALCOCO2-228ENST00000576582 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
CALCOCO2-228ENST00000576582 ADCY10Q96PN6 1610 aa18.87■□□□□ 0.61
CALCOCO2-228ENST00000576582 DIP2BQ9P265 1576 aa18.87■□□□□ 0.61
CALCOCO2-228ENST00000576582 PTPRGP23470 1445 aa18.83■□□□□ 0.6
CALCOCO2-228ENST00000576582 CUL7Q14999 1698 aa18.8■□□□□ 0.6
CALCOCO2-228ENST00000576582 KDM4FA0A1W2PPD8 638 aa18.8■□□□□ 0.6
CALCOCO2-228ENST00000576582 KDM6BO15054 1643 aa18.79■□□□□ 0.6
CALCOCO2-228ENST00000576582 CARMIL2Q6F5E8 1435 aa18.77■□□□□ 0.6
CALCOCO2-228ENST00000576582 CARMIL1Q5VZK9 1371 aa18.77■□□□□ 0.6
CALCOCO2-228ENST00000576582 TNIKQ9UKE5 1360 aa18.76■□□□□ 0.59
CALCOCO2-228ENST00000576582 ABCC2Q92887 1545 aa18.72■□□□□ 0.59
CALCOCO2-228ENST00000576582 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
CALCOCO2-228ENST00000576582 PLB1Q6P1J6 1458 aa18.71■□□□□ 0.59
CALCOCO2-228ENST00000576582 TSPOAP1O95153 1857 aa18.71■□□□□ 0.59
CALCOCO2-228ENST00000576582 ASXL2Q76L83 1435 aa18.68■□□□□ 0.58
CALCOCO2-228ENST00000576582 UHRF1BP1LA0JNW5 1464 aa18.68■□□□□ 0.58
CALCOCO2-228ENST00000576582 GLI2P10070 1586 aa18.67■□□□□ 0.58
CALCOCO2-228ENST00000576582 UACAQ9BZF9 1416 aa18.66■□□□□ 0.58
CALCOCO2-228ENST00000576582 IQGAP2Q13576 1575 aa18.64■□□□□ 0.57
CALCOCO2-228ENST00000576582 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
CALCOCO2-228ENST00000576582 KDM5BQ9UGL1 1544 aa18.58■□□□□ 0.56
CALCOCO2-228ENST00000576582 EPRSP07814 1512 aaKnown RBP18.56■□□□□ 0.56
CALCOCO2-228ENST00000576582 PPRC1Q5VV67 1664 aaKnown RBP18.56■□□□□ 0.56
CALCOCO2-228ENST00000576582 TEX14Q8IWB6 1497 aa18.55■□□□□ 0.56
CALCOCO2-228ENST00000576582 RAPGEF2Q9Y4G8 1499 aa18.54■□□□□ 0.56
CALCOCO2-228ENST00000576582 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
CALCOCO2-228ENST00000576582 ADGRL1O94910 1474 aa18.53■□□□□ 0.56
CALCOCO2-228ENST00000576582 COL17A1Q9UMD9 1497 aaPredicted RBP18.53■□□□□ 0.56
CALCOCO2-228ENST00000576582 ILDR1Q86SU0 546 aaPredicted RBP18.52■□□□□ 0.56
CALCOCO2-228ENST00000576582 MAP3K4Q9Y6R4 1608 aa18.49■□□□□ 0.55
CALCOCO2-228ENST00000576582 ZCCHC11Q5TAX3 1644 aaKnown RBP18.46■□□□□ 0.55
CALCOCO2-228ENST00000576582 WDR7Q9Y4E6 1490 aa18.45■□□□□ 0.54
CALCOCO2-228ENST00000576582 KIAA0556O60303 1618 aa18.45■□□□□ 0.54
CALCOCO2-228ENST00000576582 GOLGA3Q08378 1498 aa18.41■□□□□ 0.54
CALCOCO2-228ENST00000576582 CD109Q6YHK3 1445 aa18.4■□□□□ 0.54
CALCOCO2-228ENST00000576582 KCNH8Q96L42 1107 aa18.4■□□□□ 0.54
CALCOCO2-228ENST00000576582 MAGI3Q5TCQ9 1506 aa18.39■□□□□ 0.54
CALCOCO2-228ENST00000576582 FAM9AQ8IZU1 332 aaPredicted RBP18.38■□□□□ 0.53
CALCOCO2-228ENST00000576582 CTTNBP2Q8WZ74 1663 aa18.34■□□□□ 0.53
CALCOCO2-228ENST00000576582 HECW2Q9P2P5 1572 aa18.34■□□□□ 0.53
CALCOCO2-228ENST00000576582 ABCA8O94911 1581 aa18.33■□□□□ 0.52
CALCOCO2-228ENST00000576582 CFAP43Q8NDM7 1665 aa18.32■□□□□ 0.52
CALCOCO2-228ENST00000576582 CHIC1Q5VXU3 224 aa18.31■□□□□ 0.52
CALCOCO2-228ENST00000576582 PRXQ9BXM0 1461 aa18.3■□□□□ 0.52
CALCOCO2-228ENST00000576582 PHLDB1Q86UU1 1377 aa18.28■□□□□ 0.52
CALCOCO2-228ENST00000576582 ARAP3Q8WWN8 1544 aa18.27■□□□□ 0.51
CALCOCO2-228ENST00000576582 ATP10BO94823 1461 aa18.21■□□□□ 0.51
CALCOCO2-228ENST00000576582 P3H3Q8IVL6 736 aa18.19■□□□□ 0.5
CALCOCO2-228ENST00000576582 ARID3CA6NKF2 412 aa18.18■□□□□ 0.5
CALCOCO2-228ENST00000576582 KIF21BO75037 1637 aa18.16■□□□□ 0.5
CALCOCO2-228ENST00000576582 RAPGEF3O95398 923 aa18.15■□□□□ 0.5
CALCOCO2-228ENST00000576582 ABCA9Q8IUA7 1624 aa18.14■□□□□ 0.49
CALCOCO2-228ENST00000576582 FBXO41Q8TF61 875 aa18.14■□□□□ 0.49
CALCOCO2-228ENST00000576582 NEO1Q92859 1461 aa18.14■□□□□ 0.49
CALCOCO2-228ENST00000576582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
CALCOCO2-228ENST00000576582 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
CALCOCO2-228ENST00000576582 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
CALCOCO2-228ENST00000576582 PTPRMP28827 1452 aa18.12■□□□□ 0.49
CALCOCO2-228ENST00000576582 SAMD9Q5K651 1589 aa18.11■□□□□ 0.49
CALCOCO2-228ENST00000576582 ADAMTSL3P82987 1691 aa18.09■□□□□ 0.49
CALCOCO2-228ENST00000576582 ARID4BQ4LE39 1312 aaPredicted RBP18.08■□□□□ 0.49
CALCOCO2-228ENST00000576582 RAPGEF6Q8TEU7 1601 aa18.06■□□□□ 0.48
CALCOCO2-228ENST00000576582 PLEKHD1A6NEE1 506 aa18.06■□□□□ 0.48
CALCOCO2-228ENST00000576582 NUP153P49790 1475 aaKnown RBP18.02■□□□□ 0.48
CALCOCO2-228ENST00000576582 EEA1Q15075 1411 aa18.02■□□□□ 0.48
CALCOCO2-228ENST00000576582 DENND4BO75064 1496 aaPredicted RBP18.01■□□□□ 0.47
CALCOCO2-228ENST00000576582 BCORL1Q5H9F3 1711 aa18.01■□□□□ 0.47
CALCOCO2-228ENST00000576582 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
CALCOCO2-228ENST00000576582 FRMPD1Q5SYB0 1578 aa17.98■□□□□ 0.47
CALCOCO2-228ENST00000576582 FHOD3Q2V2M9 1422 aa17.98■□□□□ 0.47
CALCOCO2-228ENST00000576582 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
CALCOCO2-228ENST00000576582 RANGAP1P46060 587 aaPredicted RBP17.97■□□□□ 0.47
CALCOCO2-228ENST00000576582 MADDQ8WXG6 1647 aa17.96■□□□□ 0.47
CALCOCO2-228ENST00000576582 POGZQ7Z3K3 1410 aa17.96■□□□□ 0.47
CALCOCO2-228ENST00000576582 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
CALCOCO2-228ENST00000576582 FANCAO15360 1455 aa17.95■□□□□ 0.46
CALCOCO2-228ENST00000576582 ARHGEF40Q8TER5 1519 aa17.93■□□□□ 0.46
CALCOCO2-228ENST00000576582 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
CALCOCO2-228ENST00000576582 CFAP74Q9C0B2 1584 aa17.91■□□□□ 0.46
CALCOCO2-228ENST00000576582 RICTORQ6R327 1708 aa17.9■□□□□ 0.46
CALCOCO2-228ENST00000576582 EFCAB5A4FU69 1503 aa17.9■□□□□ 0.46
CALCOCO2-228ENST00000576582 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.9■□□□□ 0.46
CALCOCO2-228ENST00000576582 HSPA2P54652 639 aa17.88■□□□□ 0.45
CALCOCO2-228ENST00000576582 ZMYM4Q5VZL5 1548 aa17.88■□□□□ 0.45
CALCOCO2-228ENST00000576582 RIMS1Q86UR5 1692 aaKnown RBP17.87■□□□□ 0.45
CALCOCO2-228ENST00000576582 ZFYVE16Q7Z3T8 1539 aa17.87■□□□□ 0.45
CALCOCO2-228ENST00000576582 PLCH2O75038 1416 aa17.85■□□□□ 0.45
CALCOCO2-228ENST00000576582 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
CALCOCO2-228ENST00000576582 YEATS2Q9ULM3 1422 aa17.85■□□□□ 0.45
CALCOCO2-228ENST00000576582 SCAPERQ9BY12 1400 aa17.84■□□□□ 0.45
CALCOCO2-228ENST00000576582 MLECQ14165 292 aa17.83■□□□□ 0.44
CALCOCO2-228ENST00000576582 EFCAB2Q5VUJ9 269 aa17.83■□□□□ 0.44
CALCOCO2-228ENST00000576582 TTC37Q6PGP7 1564 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms