RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
CTNS-208ENST00000574218 JPH4Q96JJ6 628 aa21.39■■□□□ 1.01
CTNS-208ENST00000574218 RUSC2Q8N2Y8 1516 aa21.38■■□□□ 1.01
CTNS-208ENST00000574218 FAM69CQ0P6D2 419 aa21.35■■□□□ 1.01
CTNS-208ENST00000574218 ABCC10Q5T3U5 1492 aa21.33■■□□□ 1.01
CTNS-208ENST00000574218 MAPKBP1O60336 1514 aa21.33■■□□□ 1
CTNS-208ENST00000574218 DIP2BQ9P265 1576 aa21.31■■□□□ 1
CTNS-208ENST00000574218 TSPOAP1O95153 1857 aa21.3■■□□□ 1
CTNS-208ENST00000574218 KDM6BO15054 1643 aa21.29■■□□□ 1
CTNS-208ENST00000574218 ADCY10Q96PN6 1610 aa21.28■■□□□ 1
CTNS-208ENST00000574218 CUL7Q14999 1698 aa21.21■□□□□ 0.99
CTNS-208ENST00000574218 KIAA0586Q9BVV6 1533 aa21.18■□□□□ 0.98
CTNS-208ENST00000574218 KIF27Q86VH2 1401 aa21.11■□□□□ 0.97
CTNS-208ENST00000574218 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
CTNS-208ENST00000574218 KDM4FA0A1W2PPD8 638 aa21.08■□□□□ 0.97
CTNS-208ENST00000574218 PTPRGP23470 1445 aa21.07■□□□□ 0.96
CTNS-208ENST00000574218 CARMIL2Q6F5E8 1435 aa21.05■□□□□ 0.96
CTNS-208ENST00000574218 IGF1RP08069 1367 aa21.05■□□□□ 0.96
CTNS-208ENST00000574218 ABCC2Q92887 1545 aa21.02■□□□□ 0.96
CTNS-208ENST00000574218 TNIKQ9UKE5 1360 aa21■□□□□ 0.95
CTNS-208ENST00000574218 PLB1Q6P1J6 1458 aa21■□□□□ 0.95
CTNS-208ENST00000574218 GLI2P10070 1586 aa20.99■□□□□ 0.95
CTNS-208ENST00000574218 IQGAP2Q13576 1575 aa20.98■□□□□ 0.95
CTNS-208ENST00000574218 PPRC1Q5VV67 1664 aaKnown RBP20.98■□□□□ 0.95
CTNS-208ENST00000574218 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
CTNS-208ENST00000574218 ASXL2Q76L83 1435 aa20.97■□□□□ 0.95
CTNS-208ENST00000574218 UHRF1BP1LA0JNW5 1464 aa20.92■□□□□ 0.94
CTNS-208ENST00000574218 ADGRL1O94910 1474 aa20.92■□□□□ 0.94
CTNS-208ENST00000574218 UACAQ9BZF9 1416 aa20.9■□□□□ 0.94
CTNS-208ENST00000574218 TEX14Q8IWB6 1497 aa20.88■□□□□ 0.93
CTNS-208ENST00000574218 ILDR1Q86SU0 546 aaPredicted RBP20.88■□□□□ 0.93
CTNS-208ENST00000574218 MAP3K4Q9Y6R4 1608 aa20.88■□□□□ 0.93
CTNS-208ENST00000574218 ZCCHC11Q5TAX3 1644 aaKnown RBP20.86■□□□□ 0.93
CTNS-208ENST00000574218 EPRSP07814 1512 aaKnown RBP20.84■□□□□ 0.93
CTNS-208ENST00000574218 DISP1Q96F81 1524 aa20.83■□□□□ 0.92
CTNS-208ENST00000574218 KDM5BQ9UGL1 1544 aa20.82■□□□□ 0.92
CTNS-208ENST00000574218 UGGT2Q9NYU1 1516 aa20.78■□□□□ 0.92
CTNS-208ENST00000574218 KIAA0556O60303 1618 aa20.78■□□□□ 0.92
CTNS-208ENST00000574218 HECW2Q9P2P5 1572 aa20.77■□□□□ 0.92
CTNS-208ENST00000574218 COL17A1Q9UMD9 1497 aaPredicted RBP20.76■□□□□ 0.91
CTNS-208ENST00000574218 RAPGEF2Q9Y4G8 1499 aa20.76■□□□□ 0.91
CTNS-208ENST00000574218 CTTNBP2Q8WZ74 1663 aa20.73■□□□□ 0.91
CTNS-208ENST00000574218 WDR7Q9Y4E6 1490 aa20.73■□□□□ 0.91
CTNS-208ENST00000574218 CFAP43Q8NDM7 1665 aa20.72■□□□□ 0.91
CTNS-208ENST00000574218 GOLGA3Q08378 1498 aa20.65■□□□□ 0.9
CTNS-208ENST00000574218 CD109Q6YHK3 1445 aa20.64■□□□□ 0.89
CTNS-208ENST00000574218 MAGI3Q5TCQ9 1506 aa20.63■□□□□ 0.89
CTNS-208ENST00000574218 KCNH8Q96L42 1107 aa20.61■□□□□ 0.89
CTNS-208ENST00000574218 KIF21BO75037 1637 aa20.6■□□□□ 0.89
CTNS-208ENST00000574218 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
CTNS-208ENST00000574218 ABCA8O94911 1581 aa20.59■□□□□ 0.89
CTNS-208ENST00000574218 ARAP3Q8WWN8 1544 aa20.48■□□□□ 0.87
CTNS-208ENST00000574218 ABCA9Q8IUA7 1624 aa20.43■□□□□ 0.86
CTNS-208ENST00000574218 ARID3CA6NKF2 412 aa20.42■□□□□ 0.86
CTNS-208ENST00000574218 PHLDB1Q86UU1 1377 aa20.42■□□□□ 0.86
CTNS-208ENST00000574218 ADAMTSL3P82987 1691 aa20.42■□□□□ 0.86
CTNS-208ENST00000574218 FBXO41Q8TF61 875 aa20.41■□□□□ 0.86
CTNS-208ENST00000574218 ATP10BO94823 1461 aa20.38■□□□□ 0.85
CTNS-208ENST00000574218 PTPRMP28827 1452 aa20.38■□□□□ 0.85
CTNS-208ENST00000574218 PRXQ9BXM0 1461 aa20.38■□□□□ 0.85
CTNS-208ENST00000574218 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
CTNS-208ENST00000574218 BCORL1Q5H9F3 1711 aa20.36■□□□□ 0.85
CTNS-208ENST00000574218 RAPGEF6Q8TEU7 1601 aa20.36■□□□□ 0.85
CTNS-208ENST00000574218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.35■□□□□ 0.85
CTNS-208ENST00000574218 HNRNPUL2Q1KMD3 747 aaKnown RBP20.35■□□□□ 0.85
CTNS-208ENST00000574218 NEO1Q92859 1461 aa20.35■□□□□ 0.85
CTNS-208ENST00000574218 ARID4BQ4LE39 1312 aaPredicted RBP20.34■□□□□ 0.85
CTNS-208ENST00000574218 MADDQ8WXG6 1647 aa20.33■□□□□ 0.84
CTNS-208ENST00000574218 SAMD9Q5K651 1589 aa20.31■□□□□ 0.84
CTNS-208ENST00000574218 RAPGEF3O95398 923 aa20.31■□□□□ 0.84
CTNS-208ENST00000574218 PCF11O94913 1555 aaKnown RBP20.3■□□□□ 0.84
CTNS-208ENST00000574218 RIMS1Q86UR5 1692 aaKnown RBP20.29■□□□□ 0.84
CTNS-208ENST00000574218 FRMPD1Q5SYB0 1578 aa20.28■□□□□ 0.84
CTNS-208ENST00000574218 CFAP74Q9C0B2 1584 aa20.27■□□□□ 0.84
CTNS-208ENST00000574218 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
CTNS-208ENST00000574218 ARHGEF40Q8TER5 1519 aa20.26■□□□□ 0.83
CTNS-208ENST00000574218 RICTORQ6R327 1708 aa20.24■□□□□ 0.83
CTNS-208ENST00000574218 DENND4BO75064 1496 aaPredicted RBP20.21■□□□□ 0.83
CTNS-208ENST00000574218 LMTK3Q96Q04 1460 aa20.21■□□□□ 0.83
CTNS-208ENST00000574218 POGZQ7Z3K3 1410 aa20.2■□□□□ 0.82
CTNS-208ENST00000574218 FANCAO15360 1455 aa20.18■□□□□ 0.82
CTNS-208ENST00000574218 NUP153P49790 1475 aaKnown RBP20.18■□□□□ 0.82
CTNS-208ENST00000574218 PLEKHD1A6NEE1 506 aa20.17■□□□□ 0.82
CTNS-208ENST00000574218 PLPPR3Q6T4P5 718 aa20.17■□□□□ 0.82
CTNS-208ENST00000574218 AKNAQ7Z591 1439 aa20.17■□□□□ 0.82
CTNS-208ENST00000574218 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
CTNS-208ENST00000574218 CSRNP3Q8WYN3 585 aa20.16■□□□□ 0.82
CTNS-208ENST00000574218 EFCAB5A4FU69 1503 aa20.15■□□□□ 0.82
CTNS-208ENST00000574218 FER1L4A9Z1Z3 1794 aa20.15■□□□□ 0.82
CTNS-208ENST00000574218 ZFYVE16Q7Z3T8 1539 aa20.14■□□□□ 0.81
CTNS-208ENST00000574218 FHOD3Q2V2M9 1422 aa20.13■□□□□ 0.81
CTNS-208ENST00000574218 ZMYM4Q5VZL5 1548 aa20.12■□□□□ 0.81
CTNS-208ENST00000574218 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.11■□□□□ 0.81
CTNS-208ENST00000574218 TTC37Q6PGP7 1564 aa20.1■□□□□ 0.81
CTNS-208ENST00000574218 HSPA2P54652 639 aa20.09■□□□□ 0.81
CTNS-208ENST00000574218 MAGI2Q86UL8 1455 aa20.08■□□□□ 0.81
CTNS-208ENST00000574218 MLECQ14165 292 aa20.06■□□□□ 0.8
CTNS-208ENST00000574218 EEA1Q15075 1411 aa20.06■□□□□ 0.8
CTNS-208ENST00000574218 HECW1Q76N89 1606 aa20.05■□□□□ 0.8
CTNS-208ENST00000574218 SIGLEC1Q9BZZ2 1709 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms