RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 KIF13AQ9H1H9 1805 aa22.06■■□□□ 1.12
SMIM28-201ENST00000573100 BIVM-ERCC5R4GMW8 1640 aa22.04■■□□□ 1.12
SMIM28-201ENST00000573100 ABCC10Q5T3U5 1492 aa22■■□□□ 1.11
SMIM28-201ENST00000573100 MAPKBP1O60336 1514 aa21.91■■□□□ 1.1
SMIM28-201ENST00000573100 KDM4FA0A1W2PPD8 638 aa21.89■■□□□ 1.09
SMIM28-201ENST00000573100 RUSC2Q8N2Y8 1516 aa21.88■■□□□ 1.09
SMIM28-201ENST00000573100 DIP2BQ9P265 1576 aa21.87■■□□□ 1.09
SMIM28-201ENST00000573100 ADCY10Q96PN6 1610 aa21.84■■□□□ 1.09
SMIM28-201ENST00000573100 KIAA0586Q9BVV6 1533 aa21.83■■□□□ 1.09
SMIM28-201ENST00000573100 KDM6BO15054 1643 aa21.8■■□□□ 1.08
SMIM28-201ENST00000573100 IGF1RP08069 1367 aa21.8■■□□□ 1.08
SMIM28-201ENST00000573100 PTPRGP23470 1445 aa21.76■■□□□ 1.07
SMIM28-201ENST00000573100 TTBK1Q5TCY1 1321 aaPredicted RBP21.75■■□□□ 1.07
SMIM28-201ENST00000573100 TSPOAP1O95153 1857 aa21.74■■□□□ 1.07
SMIM28-201ENST00000573100 KIF27Q86VH2 1401 aa21.72■■□□□ 1.07
SMIM28-201ENST00000573100 ILDR1Q86SU0 546 aaPredicted RBP21.68■■□□□ 1.06
SMIM28-201ENST00000573100 TNIKQ9UKE5 1360 aa21.66■■□□□ 1.06
SMIM28-201ENST00000573100 CARMIL2Q6F5E8 1435 aa21.65■■□□□ 1.06
SMIM28-201ENST00000573100 CARMIL1Q5VZK9 1371 aa21.64■■□□□ 1.06
SMIM28-201ENST00000573100 CUL7Q14999 1698 aa21.64■■□□□ 1.05
SMIM28-201ENST00000573100 ABCC2Q92887 1545 aa21.64■■□□□ 1.05
SMIM28-201ENST00000573100 PLB1Q6P1J6 1458 aa21.63■■□□□ 1.05
SMIM28-201ENST00000573100 ASXL2Q76L83 1435 aa21.63■■□□□ 1.05
SMIM28-201ENST00000573100 GLI2P10070 1586 aa21.57■■□□□ 1.04
SMIM28-201ENST00000573100 UHRF1BP1LA0JNW5 1464 aa21.55■■□□□ 1.04
SMIM28-201ENST00000573100 UACAQ9BZF9 1416 aa21.55■■□□□ 1.04
SMIM28-201ENST00000573100 ADGRL1O94910 1474 aa21.54■■□□□ 1.04
SMIM28-201ENST00000573100 COL17A1Q9UMD9 1497 aaPredicted RBP21.51■■□□□ 1.03
SMIM28-201ENST00000573100 PPRC1Q5VV67 1664 aaKnown RBP21.5■■□□□ 1.03
SMIM28-201ENST00000573100 IQGAP2Q13576 1575 aa21.49■■□□□ 1.03
SMIM28-201ENST00000573100 EPRSP07814 1512 aaKnown RBP21.47■■□□□ 1.03
SMIM28-201ENST00000573100 DISP1Q96F81 1524 aa21.46■■□□□ 1.03
SMIM28-201ENST00000573100 KDM5BQ9UGL1 1544 aa21.45■■□□□ 1.02
SMIM28-201ENST00000573100 TEX14Q8IWB6 1497 aa21.45■■□□□ 1.02
SMIM28-201ENST00000573100 MAP3K4Q9Y6R4 1608 aa21.4■■□□□ 1.02
SMIM28-201ENST00000573100 UGGT2Q9NYU1 1516 aa21.36■■□□□ 1.01
SMIM28-201ENST00000573100 RAPGEF2Q9Y4G8 1499 aa21.35■■□□□ 1.01
SMIM28-201ENST00000573100 HECW2Q9P2P5 1572 aa21.35■■□□□ 1.01
SMIM28-201ENST00000573100 ZCCHC11Q5TAX3 1644 aaKnown RBP21.34■■□□□ 1.01
SMIM28-201ENST00000573100 KCNH8Q96L42 1107 aa21.32■■□□□ 1
SMIM28-201ENST00000573100 WDR7Q9Y4E6 1490 aa21.32■■□□□ 1
SMIM28-201ENST00000573100 KIAA0556O60303 1618 aa21.29■■□□□ 1
SMIM28-201ENST00000573100 CD109Q6YHK3 1445 aa21.29■■□□□ 1
SMIM28-201ENST00000573100 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
SMIM28-201ENST00000573100 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
SMIM28-201ENST00000573100 CFAP43Q8NDM7 1665 aa21.17■□□□□ 0.98
SMIM28-201ENST00000573100 FAM9AQ8IZU1 332 aaPredicted RBP21.16■□□□□ 0.98
SMIM28-201ENST00000573100 ABCA8O94911 1581 aa21.14■□□□□ 0.98
SMIM28-201ENST00000573100 FBXO41Q8TF61 875 aa21.13■□□□□ 0.97
SMIM28-201ENST00000573100 ARID3CA6NKF2 412 aa21.11■□□□□ 0.97
SMIM28-201ENST00000573100 ARAP3Q8WWN8 1544 aa21.1■□□□□ 0.97
SMIM28-201ENST00000573100 CTTNBP2Q8WZ74 1663 aa21.08■□□□□ 0.96
SMIM28-201ENST00000573100 KIF21BO75037 1637 aa21.07■□□□□ 0.96
SMIM28-201ENST00000573100 PHLDB1Q86UU1 1377 aa21.07■□□□□ 0.96
SMIM28-201ENST00000573100 P3H3Q8IVL6 736 aa21.06■□□□□ 0.96
SMIM28-201ENST00000573100 RAPGEF3O95398 923 aa21.04■□□□□ 0.96
SMIM28-201ENST00000573100 ATP10BO94823 1461 aa21.03■□□□□ 0.96
SMIM28-201ENST00000573100 PTPRMP28827 1452 aa21.02■□□□□ 0.96
SMIM28-201ENST00000573100 PRXQ9BXM0 1461 aa21.01■□□□□ 0.95
SMIM28-201ENST00000573100 ARID4BQ4LE39 1312 aaPredicted RBP21■□□□□ 0.95
SMIM28-201ENST00000573100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.98■□□□□ 0.95
SMIM28-201ENST00000573100 HNRNPUL2Q1KMD3 747 aaKnown RBP20.98■□□□□ 0.95
SMIM28-201ENST00000573100 ADAMTSL3P82987 1691 aa20.96■□□□□ 0.95
SMIM28-201ENST00000573100 NEO1Q92859 1461 aa20.94■□□□□ 0.94
SMIM28-201ENST00000573100 ABCA9Q8IUA7 1624 aa20.94■□□□□ 0.94
SMIM28-201ENST00000573100 PCF11O94913 1555 aaKnown RBP20.85■□□□□ 0.93
SMIM28-201ENST00000573100 BCORL1Q5H9F3 1711 aa20.85■□□□□ 0.93
SMIM28-201ENST00000573100 LMTK3Q96Q04 1460 aa20.84■□□□□ 0.93
SMIM28-201ENST00000573100 PLEKHD1A6NEE1 506 aa20.84■□□□□ 0.93
SMIM28-201ENST00000573100 CSRNP3Q8WYN3 585 aa20.84■□□□□ 0.93
SMIM28-201ENST00000573100 MADDQ8WXG6 1647 aa20.83■□□□□ 0.93
SMIM28-201ENST00000573100 RAPGEF6Q8TEU7 1601 aa20.82■□□□□ 0.92
SMIM28-201ENST00000573100 FRMPD1Q5SYB0 1578 aa20.81■□□□□ 0.92
SMIM28-201ENST00000573100 HSPA2P54652 639 aa20.81■□□□□ 0.92
SMIM28-201ENST00000573100 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
SMIM28-201ENST00000573100 DENND4BO75064 1496 aaPredicted RBP20.81■□□□□ 0.92
SMIM28-201ENST00000573100 RANGAP1P46060 587 aaPredicted RBP20.8■□□□□ 0.92
SMIM28-201ENST00000573100 SAMD9Q5K651 1589 aa20.8■□□□□ 0.92
SMIM28-201ENST00000573100 NUP153P49790 1475 aaKnown RBP20.79■□□□□ 0.92
SMIM28-201ENST00000573100 AKNAQ7Z591 1439 aa20.78■□□□□ 0.92
SMIM28-201ENST00000573100 POGZQ7Z3K3 1410 aa20.77■□□□□ 0.91
SMIM28-201ENST00000573100 FHOD3Q2V2M9 1422 aa20.76■□□□□ 0.91
SMIM28-201ENST00000573100 FANCAO15360 1455 aa20.74■□□□□ 0.91
SMIM28-201ENST00000573100 RIMS1Q86UR5 1692 aaKnown RBP20.73■□□□□ 0.91
SMIM28-201ENST00000573100 ARHGEF40Q8TER5 1519 aa20.73■□□□□ 0.91
SMIM28-201ENST00000573100 CERKQ8TCT0 537 aa20.73■□□□□ 0.91
SMIM28-201ENST00000573100 MLECQ14165 292 aa20.72■□□□□ 0.91
SMIM28-201ENST00000573100 RICTORQ6R327 1708 aa20.7■□□□□ 0.9
SMIM28-201ENST00000573100 YEATS2Q9ULM3 1422 aa20.68■□□□□ 0.9
SMIM28-201ENST00000573100 MAGI2Q86UL8 1455 aa20.66■□□□□ 0.9
SMIM28-201ENST00000573100 ZFYVE16Q7Z3T8 1539 aa20.66■□□□□ 0.9
SMIM28-201ENST00000573100 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.66■□□□□ 0.9
SMIM28-201ENST00000573100 CFAP74Q9C0B2 1584 aa20.65■□□□□ 0.9
SMIM28-201ENST00000573100 EFCAB5A4FU69 1503 aa20.64■□□□□ 0.9
SMIM28-201ENST00000573100 ZMYM4Q5VZL5 1548 aa20.64■□□□□ 0.9
SMIM28-201ENST00000573100 SCAPERQ9BY12 1400 aa20.62■□□□□ 0.89
SMIM28-201ENST00000573100 TTC37Q6PGP7 1564 aa20.59■□□□□ 0.89
SMIM28-201ENST00000573100 HECW1Q76N89 1606 aa20.59■□□□□ 0.89
SMIM28-201ENST00000573100 PLCH2O75038 1416 aa20.59■□□□□ 0.89
SMIM28-201ENST00000573100 EEA1Q15075 1411 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms