RNA–Protein interactions for RNA: ENST00000572621.5

PRPF8-205, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF8, Length 7,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-205ENST00000572621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.513e-7■■□□□ 11.9
PRPF8-205ENST00000572621 NAP1L5Q96NT1 182 aaPredicted RBP18.2■□□□□ 0.5
PRPF8-205ENST00000572621 DCAF1Q9Y4B6 1507 aa18.19■□□□□ 0.5
PRPF8-205ENST00000572621 ERICH6BQ5W0A0 696 aa18.19■□□□□ 0.5
PRPF8-205ENST00000572621 TPRNQ4KMQ1 711 aa18.19■□□□□ 0.5
PRPF8-205ENST00000572621 SENP3-EIF4A1A0A087X0R7 540 aa18.18■□□□□ 0.5
PRPF8-205ENST00000572621 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.5
PRPF8-205ENST00000572621 ABCC9O60706 1549 aa18.14■□□□□ 0.49
PRPF8-205ENST00000572621 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.49
PRPF8-205ENST00000572621 ZRSR1Q15695 479 aaKnown RBP18.1■□□□□ 0.49
PRPF8-205ENST00000572621 EIF4G2P78344 907 aaKnown RBP eCLIP18.1■□□□□ 0.49
PRPF8-205ENST00000572621 PPM1GO15355 546 aaPredicted RBP18.1■□□□□ 0.49
PRPF8-205ENST00000572621 A0A0G2JS52 829 aa18.06■□□□□ 0.48
PRPF8-205ENST00000572621 PLCB2Q00722 1185 aa18.05■□□□□ 0.48
PRPF8-205ENST00000572621 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
PRPF8-205ENST00000572621 NOP58Q9Y2X3 529 aaKnown RBP18.02■□□□□ 0.48
PRPF8-205ENST00000572621 PLEKHG5O94827 1062 aa18.02■□□□□ 0.47
PRPF8-205ENST00000572621 CASC1Q6TDU7 716 aa17.99■□□□□ 0.47
PRPF8-205ENST00000572621 FTSJ3Q8IY81 847 aaKnown RBP17.99■□□□□ 0.47
PRPF8-205ENST00000572621 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
PRPF8-205ENST00000572621 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
PRPF8-205ENST00000572621 RGS3P49796 1198 aa17.98■□□□□ 0.47
PRPF8-205ENST00000572621 TULP1O00294 542 aaPredicted RBP17.97■□□□□ 0.47
PRPF8-205ENST00000572621 ZBTB7CA1YPR0 619 aa17.97■□□□□ 0.47
PRPF8-205ENST00000572621 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
PRPF8-205ENST00000572621 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
PRPF8-205ENST00000572621 PPP4R2Q9NY27 417 aa17.93■□□□□ 0.46
PRPF8-205ENST00000572621 TAOK2Q9UL54 1235 aa17.93■□□□□ 0.46
PRPF8-205ENST00000572621 MTUS2Q5JR59 1369 aa17.92■□□□□ 0.46
PRPF8-205ENST00000572621 C14orf37Q86TY3 774 aa17.92■□□□□ 0.46
PRPF8-205ENST00000572621 B4GALNT3Q6L9W6 998 aa17.91■□□□□ 0.46
PRPF8-205ENST00000572621 HSP90AB1P08238 724 aaKnown RBP17.91■□□□□ 0.46
PRPF8-205ENST00000572621 NEUROD2Q15784 382 aa17.9■□□□□ 0.46
PRPF8-205ENST00000572621 DEKP35659 375 aaKnown RBP17.89■□□□□ 0.46
PRPF8-205ENST00000572621 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
PRPF8-205ENST00000572621 NPM1P06748 294 aaKnown RBP eCLIP17.89■□□□□ 0.45
PRPF8-205ENST00000572621 RGL3Q3MIN7 710 aa17.89■□□□□ 0.45
PRPF8-205ENST00000572621 KNSTRNQ9Y448 316 aa17.86■□□□□ 0.45
PRPF8-205ENST00000572621 FRAT1Q92837 279 aaPredicted RBP17.86■□□□□ 0.45
PRPF8-205ENST00000572621 CFAP53Q96M91 514 aa17.85■□□□□ 0.45
PRPF8-205ENST00000572621 MSNP26038 577 aaKnown RBP17.84■□□□□ 0.45
PRPF8-205ENST00000572621 CHAF1AQ13111 956 aaPredicted RBP17.83■□□□□ 0.44
PRPF8-205ENST00000572621 GOLGA6L6A8MZA4 724 aa17.82■□□□□ 0.44
PRPF8-205ENST00000572621 NRDCO43847 1150 aa17.8■□□□□ 0.44
PRPF8-205ENST00000572621 FGD1P98174 961 aa17.8■□□□□ 0.44
PRPF8-205ENST00000572621 SPRYD3Q8NCJ5 442 aa17.79■□□□□ 0.44
PRPF8-205ENST00000572621 NAP1L2Q9ULW6 460 aaPredicted RBP17.77■□□□□ 0.44
PRPF8-205ENST00000572621 KCNJ4P48050 445 aa17.76■□□□□ 0.43
PRPF8-205ENST00000572621 L1TD1Q5T7N2 865 aaKnown RBP17.76■□□□□ 0.43
PRPF8-205ENST00000572621 CLIP1P30622 1438 aa17.75■□□□□ 0.43
PRPF8-205ENST00000572621 HSCBQ8IWL3 235 aa17.75■□□□□ 0.43
PRPF8-205ENST00000572621 GOLGA6L4A6NEF3 574 aa17.75■□□□□ 0.43
PRPF8-205ENST00000572621 RBM19Q9Y4C8 960 aaKnown RBP17.75■□□□□ 0.43
PRPF8-205ENST00000572621 PPP1R15AO75807 674 aaPredicted RBP17.74■□□□□ 0.43
PRPF8-205ENST00000572621 CARD11Q9BXL7 1154 aa17.74■□□□□ 0.43
PRPF8-205ENST00000572621 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.74■□□□□ 0.43
PRPF8-205ENST00000572621 MAPK8IP3Q9UPT6 1336 aa17.74■□□□□ 0.43
PRPF8-205ENST00000572621 ARID3AQ99856 593 aa17.74■□□□□ 0.43
PRPF8-205ENST00000572621 CDCA8Q53HL2 280 aa17.73■□□□□ 0.43
PRPF8-205ENST00000572621 DRC7Q8IY82 874 aa17.73■□□□□ 0.43
PRPF8-205ENST00000572621 OS9Q13438 667 aaPredicted RBP17.71■□□□□ 0.43
PRPF8-205ENST00000572621 CC2D1BQ5T0F9 858 aaKnown RBP17.7■□□□□ 0.42
PRPF8-205ENST00000572621 SCRIBQ14160 1630 aa17.7■□□□□ 0.42
PRPF8-205ENST00000572621 CCDC180Q9P1Z9 1646 aa17.68■□□□□ 0.42
PRPF8-205ENST00000572621 NUDCQ9Y266 331 aa17.67■□□□□ 0.42
PRPF8-205ENST00000572621 GZF1Q9H116 711 aaPredicted RBP17.66■□□□□ 0.42
PRPF8-205ENST00000572621 CHMP4BQ9H444 224 aaKnown RBP17.65■□□□□ 0.42
PRPF8-205ENST00000572621 SIN3AQ96ST3 1273 aa17.65■□□□□ 0.42
PRPF8-205ENST00000572621 U2SURPO15042 1029 aaKnown RBP17.64■□□□□ 0.41
PRPF8-205ENST00000572621 MS4A1P11836 297 aa17.64■□□□□ 0.41
PRPF8-205ENST00000572621 KCNH8Q96L42 1107 aa17.64■□□□□ 0.41
PRPF8-205ENST00000572621 HAP1P54257 671 aaPredicted RBP17.63■□□□□ 0.41
PRPF8-205ENST00000572621 ZCCHC6Q5VYS8 1495 aaKnown RBP17.62■□□□□ 0.41
PRPF8-205ENST00000572621 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
PRPF8-205ENST00000572621 PNNQ9H307 717 aaKnown RBP17.6■□□□□ 0.41
PRPF8-205ENST00000572621 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
PRPF8-205ENST00000572621 MCCP23508 829 aa17.58■□□□□ 0.4
PRPF8-205ENST00000572621 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
PRPF8-205ENST00000572621 CEP162Q5TB80 1403 aa17.58■□□□□ 0.4
PRPF8-205ENST00000572621 SLKQ9H2G2 1235 aaPredicted RBP17.58■□□□□ 0.4
PRPF8-205ENST00000572621 RSF1Q96T23 1441 aaPredicted RBP17.58■□□□□ 0.4
PRPF8-205ENST00000572621 KIAA2012Q0VF49 1180 aa17.57■□□□□ 0.4
PRPF8-205ENST00000572621 NPHP1O15259 732 aa17.55■□□□□ 0.4
PRPF8-205ENST00000572621 GOLGA2Q08379 1002 aa17.55■□□□□ 0.4
PRPF8-205ENST00000572621 LMOD2Q6P5Q4 547 aa17.55■□□□□ 0.4
PRPF8-205ENST00000572621 TNNT3P45378 269 aaPredicted RBP17.54■□□□□ 0.4
PRPF8-205ENST00000572621 GBP4Q96PP9 640 aa17.54■□□□□ 0.4
PRPF8-205ENST00000572621 POGKQ9P215 609 aa17.53■□□□□ 0.4
PRPF8-205ENST00000572621 PLEKHD1A6NEE1 506 aa17.53■□□□□ 0.4
PRPF8-205ENST00000572621 APBB1O00213 710 aa17.51■□□□□ 0.39
PRPF8-205ENST00000572621 CLSTN1O94985 981 aa17.51■□□□□ 0.39
PRPF8-205ENST00000572621 CFDP1Q9UEE9 299 aaPredicted RBP17.51■□□□□ 0.39
PRPF8-205ENST00000572621 GNL2Q13823 731 aaKnown RBP17.49■□□□□ 0.39
PRPF8-205ENST00000572621 GOLGA3Q08378 1498 aa17.49■□□□□ 0.39
PRPF8-205ENST00000572621 KIAA1211Q6ZU35 1233 aa17.46■□□□□ 0.39
PRPF8-205ENST00000572621 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
PRPF8-205ENST00000572621 PTMSP20962 102 aa17.45■□□□□ 0.38
PRPF8-205ENST00000572621 NOC3LQ8WTT2 800 aaKnown RBP17.45■□□□□ 0.38
PRPF8-205ENST00000572621 TMF1P82094 1093 aa17.45■□□□□ 0.38
PRPF8-205ENST00000572621 GOLGA6L3A6NEY3 463 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms