RNA–Protein interactions for RNA: ENST00000572221.5

EDC4-204, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-204ENST00000572221 RRP7BPQ9NSQ0 103 aa27.56■■■□□ 2
EDC4-204ENST00000572221 BAZ1BQ9UIG0 1483 aaKnown RBP27.53■■■□□ 2
EDC4-204ENST00000572221 KIF27Q86VH2 1401 aa27.53■■■□□ 2
EDC4-204ENST00000572221 CEP162Q5TB80 1403 aa27.53■■■□□ 2
EDC4-204ENST00000572221 KCNH8Q96L42 1107 aa27.49■■□□□ 1.99
EDC4-204ENST00000572221 PPP1R15AO75807 674 aaPredicted RBP27.46■■□□□ 1.99
EDC4-204ENST00000572221 CFDP1Q9UEE9 299 aaPredicted RBP27.43■■□□□ 1.98
EDC4-204ENST00000572221 CDCA8Q53HL2 280 aa27.43■■□□□ 1.98
EDC4-204ENST00000572221 MYH16Q9H6N6 1097 aa27.42■■□□□ 1.98
EDC4-204ENST00000572221 CEP164Q9UPV0 1460 aa27.42■■□□□ 1.98
EDC4-204ENST00000572221 TNIKQ9UKE5 1360 aa27.42■■□□□ 1.98
EDC4-204ENST00000572221 MIER1Q8N108 512 aa27.34■■□□□ 1.97
EDC4-204ENST00000572221 CFAP53Q96M91 514 aa27.32■■□□□ 1.96
EDC4-204ENST00000572221 HIRIP3Q9BW71 556 aaPredicted RBP27.32■■□□□ 1.96
EDC4-204ENST00000572221 SCAF1Q9H7N4 1312 aaKnown RBP27.32■■□□□ 1.96
EDC4-204ENST00000572221 RGL3Q3MIN7 710 aa27.3■■□□□ 1.96
EDC4-204ENST00000572221 KNSTRNQ9Y448 316 aa27.24■■□□□ 1.95
EDC4-204ENST00000572221 BAZ1AQ9NRL2 1556 aaPredicted RBP27.24■■□□□ 1.95
EDC4-204ENST00000572221 C14orf37Q86TY3 774 aa27.21■■□□□ 1.95
EDC4-204ENST00000572221 CARD11Q9BXL7 1154 aa27.2■■□□□ 1.94
EDC4-204ENST00000572221 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
EDC4-204ENST00000572221 ARID4BQ4LE39 1312 aaPredicted RBP27.15■■□□□ 1.94
EDC4-204ENST00000572221 ERCC6Q03468 1493 aa27.14■■□□□ 1.94
EDC4-204ENST00000572221 ZBTB7CA1YPR0 619 aa27.13■■□□□ 1.93
EDC4-204ENST00000572221 IRX6P78412 446 aaPredicted RBP27.1■■□□□ 1.93
EDC4-204ENST00000572221 MYO15BQ96JP2 1530 aa27.1■■□□□ 1.93
EDC4-204ENST00000572221 A0A0G2JS52 829 aa27.1■■□□□ 1.93
EDC4-204ENST00000572221 BECN1Q14457 450 aa27.1■■□□□ 1.93
EDC4-204ENST00000572221 DDRGK1Q96HY6 314 aa27.09■■□□□ 1.93
EDC4-204ENST00000572221 CCNB3Q8WWL7 1395 aa27.08■■□□□ 1.93
EDC4-204ENST00000572221 EIF5BO60841 1220 aaKnown RBP27.06■■□□□ 1.92
EDC4-204ENST00000572221 NUDCQ9Y266 331 aa27.06■■□□□ 1.92
EDC4-204ENST00000572221 SENP3Q9H4L4 574 aaPredicted RBP27.04■■□□□ 1.92
EDC4-204ENST00000572221 CARMIL1Q5VZK9 1371 aa27.03■■□□□ 1.92
EDC4-204ENST00000572221 HAP1P54257 671 aaPredicted RBP27.01■■□□□ 1.91
EDC4-204ENST00000572221 NBR1Q14596 966 aa27.01■■□□□ 1.91
EDC4-204ENST00000572221 MAPK8IP3Q9UPT6 1336 aa27.01■■□□□ 1.91
EDC4-204ENST00000572221 POGKQ9P215 609 aa27.01■■□□□ 1.91
EDC4-204ENST00000572221 ANP32EQ9BTT0 268 aa26.99■■□□□ 1.91
EDC4-204ENST00000572221 TIMELESSQ9UNS1 1208 aa26.99■■□□□ 1.91
EDC4-204ENST00000572221 PPM1GO15355 546 aaPredicted RBP26.97■■□□□ 1.91
EDC4-204ENST00000572221 PLEKHG5O94827 1062 aa26.96■■□□□ 1.91
EDC4-204ENST00000572221 NCLP19338 710 aaKnown RBP26.95■■□□□ 1.9
EDC4-204ENST00000572221 FTSJ3Q8IY81 847 aaKnown RBP26.95■■□□□ 1.9
EDC4-204ENST00000572221 CUX2O14529 1486 aa26.95■■□□□ 1.9
EDC4-204ENST00000572221 KANK1Q14678 1352 aa26.93■■□□□ 1.9
EDC4-204ENST00000572221 GOLGA6L22H0YM25 854 aa26.93■■□□□ 1.9
EDC4-204ENST00000572221 CHMP4BQ9H444 224 aaKnown RBP26.92■■□□□ 1.9
EDC4-204ENST00000572221 SIN3AQ96ST3 1273 aa26.91■■□□□ 1.9
EDC4-204ENST00000572221 CASC1Q6TDU7 716 aa26.91■■□□□ 1.9
EDC4-204ENST00000572221 CECR2Q9BXF3 1484 aa26.89■■□□□ 1.9
EDC4-204ENST00000572221 PNNQ9H307 717 aaKnown RBP26.88■■□□□ 1.89
EDC4-204ENST00000572221 HDGFP51858 240 aaKnown RBP26.88■■□□□ 1.89
EDC4-204ENST00000572221 TMF1P82094 1093 aa26.87■■□□□ 1.89
EDC4-204ENST00000572221 MS4A1P11836 297 aa26.87■■□□□ 1.89
EDC4-204ENST00000572221 ARXQ96QS3 562 aa26.85■■□□□ 1.89
EDC4-204ENST00000572221 CDK11BP21127 795 aaKnown RBP26.84■■□□□ 1.89
EDC4-204ENST00000572221 SUPT16HQ9Y5B9 1047 aaKnown RBP26.83■■□□□ 1.89
EDC4-204ENST00000572221 NEUROD2Q15784 382 aa26.83■■□□□ 1.89
EDC4-204ENST00000572221 EIF4G1Q04637 1599 aaKnown RBP26.82■■□□□ 1.88
EDC4-204ENST00000572221 GLIPR1L2Q4G1C9 344 aa26.81■■□□□ 1.88
EDC4-204ENST00000572221 DCAF11Q8TEB1 546 aa26.8■■□□□ 1.88
EDC4-204ENST00000572221 LAS1LQ9Y4W2 734 aaKnown RBP26.78■■□□□ 1.88
EDC4-204ENST00000572221 PPP4R2Q9NY27 417 aa26.77■■□□□ 1.88
EDC4-204ENST00000572221 SOGA1O94964 1423 aa26.76■■□□□ 1.87
EDC4-204ENST00000572221 CARMIL2Q6F5E8 1435 aa26.75■■□□□ 1.87
EDC4-204ENST00000572221 LMOD2Q6P5Q4 547 aa26.75■■□□□ 1.87
EDC4-204ENST00000572221 VPS8Q8N3P4 1428 aa26.74■■□□□ 1.87
EDC4-204ENST00000572221 CC2D1BQ5T0F9 858 aaKnown RBP26.73■■□□□ 1.87
EDC4-204ENST00000572221 ARHGAP35Q9NRY4 1499 aa26.72■■□□□ 1.87
EDC4-204ENST00000572221 U2SURPO15042 1029 aaKnown RBP26.72■■□□□ 1.87
EDC4-204ENST00000572221 SETD5Q9C0A6 1442 aa26.72■■□□□ 1.87
EDC4-204ENST00000572221 TRIM44Q96DX7 344 aaPredicted RBP26.71■■□□□ 1.87
EDC4-204ENST00000572221 PDS5BQ9NTI5 1447 aa26.71■■□□□ 1.87
EDC4-204ENST00000572221 TNNT2P45379 298 aaPredicted RBP26.69■■□□□ 1.86
EDC4-204ENST00000572221 ZRSR1Q15695 479 aaKnown RBP26.69■■□□□ 1.86
EDC4-204ENST00000572221 FRAT1Q92837 279 aaPredicted RBP26.69■■□□□ 1.86
EDC4-204ENST00000572221 SMARCA2P51531 1590 aa26.68■■□□□ 1.86
EDC4-204ENST00000572221 SENP3-EIF4A1A0A087X0R7 540 aa26.67■■□□□ 1.86
EDC4-204ENST00000572221 CCER2I3L3R5 266 aa26.64■■□□□ 1.85
EDC4-204ENST00000572221 FMN1Q68DA7 1419 aa26.63■■□□□ 1.85
EDC4-204ENST00000572221 CCDC88BA6NC98 1476 aa26.63■■□□□ 1.85
EDC4-204ENST00000572221 SRPK2P78362 688 aaKnown RBP26.63■■□□□ 1.85
EDC4-204ENST00000572221 PKD2Q13563 968 aa26.6■■□□□ 1.85
EDC4-204ENST00000572221 MORC1Q86VD1 984 aa26.6■■□□□ 1.85
EDC4-204ENST00000572221 RGS3P49796 1198 aa26.59■■□□□ 1.85
EDC4-204ENST00000572221 EFCAB2Q5VUJ9 269 aa26.58■■□□□ 1.84
EDC4-204ENST00000572221 OS9Q13438 667 aaPredicted RBP26.57■■□□□ 1.84
EDC4-204ENST00000572221 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
EDC4-204ENST00000572221 GGT6Q6P531 493 aa26.55■■□□□ 1.84
EDC4-204ENST00000572221 MLECQ14165 292 aa26.54■■□□□ 1.84
EDC4-204ENST00000572221 HSPA5P11021 654 aaKnown RBP26.52■■□□□ 1.84
EDC4-204ENST00000572221 HDGFL2Q7Z4V5 671 aaPredicted RBP26.52■■□□□ 1.84
EDC4-204ENST00000572221 ANKRD30AQ9BXX3 1397 aa26.51■■□□□ 1.83
EDC4-204ENST00000572221 PTMAP06454 111 aaKnown RBP26.51■■□□□ 1.83
EDC4-204ENST00000572221 TRHP20396 242 aaPredicted RBP26.5■■□□□ 1.83
EDC4-204ENST00000572221 KTN1Q86UP2 1357 aaKnown RBP26.5■■□□□ 1.83
EDC4-204ENST00000572221 NPHP1O15259 732 aa26.5■■□□□ 1.83
EDC4-204ENST00000572221 CFAP44Q96MT7 982 aa26.49■■□□□ 1.83
EDC4-204ENST00000572221 TDRD9Q8NDG6 1382 aaKnown RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms