RNA–Protein interactions for RNA: ENST00000572111.1

SRL-203, Transcript of sarcalumenin, humanhuman

TSL 1 (best)

Gene SRL, Length 5,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRL-203ENST00000572111 NBR1Q14596 966 aa20.04■□□□□ 0.8
SRL-203ENST00000572111 HNRNPUQ00839 825 aaKnown RBP eCLIP20.04■□□□□ 0.8
SRL-203ENST00000572111 CFDP1Q9UEE9 299 aaPredicted RBP20.02■□□□□ 0.79
SRL-203ENST00000572111 DDX10Q13206 875 aaKnown RBP20■□□□□ 0.79
SRL-203ENST00000572111 C14orf37Q86TY3 774 aa20■□□□□ 0.79
SRL-203ENST00000572111 EIF4G1Q04637 1599 aaKnown RBP19.99■□□□□ 0.79
SRL-203ENST00000572111 PDS5BQ9NTI5 1447 aa19.99■□□□□ 0.79
SRL-203ENST00000572111 FAM9BQ8IZU0 186 aa19.98■□□□□ 0.79
SRL-203ENST00000572111 SMARCA2P51531 1590 aa19.96■□□□□ 0.79
SRL-203ENST00000572111 CUX2O14529 1486 aa19.95■□□□□ 0.78
SRL-203ENST00000572111 PLEKHG5O94827 1062 aa19.95■□□□□ 0.78
SRL-203ENST00000572111 ANP32BQ92688 251 aaKnown RBP19.94■□□□□ 0.78
SRL-203ENST00000572111 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
SRL-203ENST00000572111 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
SRL-203ENST00000572111 SALL2Q9Y467 1007 aaPredicted RBP19.92■□□□□ 0.78
SRL-203ENST00000572111 HSP90AA1P07900 732 aaKnown RBP19.91■□□□□ 0.78
SRL-203ENST00000572111 ZBTB7CA1YPR0 619 aa19.91■□□□□ 0.78
SRL-203ENST00000572111 CARMIL1Q5VZK9 1371 aa19.88■□□□□ 0.77
SRL-203ENST00000572111 A0A0G2JS52 829 aa19.88■□□□□ 0.77
SRL-203ENST00000572111 ARXQ96QS3 562 aa19.88■□□□□ 0.77
SRL-203ENST00000572111 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
SRL-203ENST00000572111 CCDC136Q96JN2 1154 aa19.85■□□□□ 0.77
SRL-203ENST00000572111 IRX6P78412 446 aaPredicted RBP19.85■□□□□ 0.77
SRL-203ENST00000572111 RGL3Q3MIN7 710 aa19.85■□□□□ 0.77
SRL-203ENST00000572111 MIER1Q8N108 512 aa19.84■□□□□ 0.77
SRL-203ENST00000572111 UPF2Q9HAU5 1272 aaKnown RBP19.84■□□□□ 0.77
SRL-203ENST00000572111 CCDC88BA6NC98 1476 aa19.82■□□□□ 0.76
SRL-203ENST00000572111 GLIPR1L2Q4G1C9 344 aa19.82■□□□□ 0.76
SRL-203ENST00000572111 SOGA1O94964 1423 aa19.8■□□□□ 0.76
SRL-203ENST00000572111 HAP1P54257 671 aaPredicted RBP19.78■□□□□ 0.76
SRL-203ENST00000572111 TNIKQ9UKE5 1360 aa19.78■□□□□ 0.76
SRL-203ENST00000572111 MLECQ14165 292 aa19.78■□□□□ 0.76
SRL-203ENST00000572111 CCNB3Q8WWL7 1395 aa19.78■□□□□ 0.76
SRL-203ENST00000572111 TDRD9Q8NDG6 1382 aaKnown RBP19.77■□□□□ 0.76
SRL-203ENST00000572111 TMC1Q8TDI8 760 aa19.75■□□□□ 0.75
SRL-203ENST00000572111 WDR43Q15061 677 aaKnown RBP eCLIP19.74■□□□□ 0.75
SRL-203ENST00000572111 CARMIL2Q6F5E8 1435 aa19.73■□□□□ 0.75
SRL-203ENST00000572111 HIRIP3Q9BW71 556 aaPredicted RBP19.7■□□□□ 0.74
SRL-203ENST00000572111 CADPSQ9ULU8 1353 aa19.69■□□□□ 0.74
SRL-203ENST00000572111 FHAD1B1AJZ9 1412 aa19.69■□□□□ 0.74
SRL-203ENST00000572111 MRS2Q9HD23 443 aa19.69■□□□□ 0.74
SRL-203ENST00000572111 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
SRL-203ENST00000572111 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
SRL-203ENST00000572111 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
SRL-203ENST00000572111 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.63■□□□□ 0.73
SRL-203ENST00000572111 KANK1Q14678 1352 aa19.62■□□□□ 0.73
SRL-203ENST00000572111 POGKQ9P215 609 aa19.62■□□□□ 0.73
SRL-203ENST00000572111 LMOD2Q6P5Q4 547 aa19.62■□□□□ 0.73
SRL-203ENST00000572111 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
SRL-203ENST00000572111 WIZO95785 1651 aa19.6■□□□□ 0.73
SRL-203ENST00000572111 ATAD2BQ9ULI0 1458 aa19.59■□□□□ 0.73
SRL-203ENST00000572111 ANP32EQ9BTT0 268 aa19.57■□□□□ 0.72
SRL-203ENST00000572111 GGT6Q6P531 493 aa19.57■□□□□ 0.72
SRL-203ENST00000572111 CARD11Q9BXL7 1154 aa19.55■□□□□ 0.72
SRL-203ENST00000572111 PPM1GO15355 546 aaPredicted RBP19.54■□□□□ 0.72
SRL-203ENST00000572111 CDCA8Q53HL2 280 aa19.54■□□□□ 0.72
SRL-203ENST00000572111 HDGFP51858 240 aaKnown RBP19.53■□□□□ 0.72
SRL-203ENST00000572111 SENP3-EIF4A1A0A087X0R7 540 aa19.49■□□□□ 0.71
SRL-203ENST00000572111 KNSTRNQ9Y448 316 aa19.48■□□□□ 0.71
SRL-203ENST00000572111 EFCAB2Q5VUJ9 269 aa19.48■□□□□ 0.71
SRL-203ENST00000572111 SMARCA4P51532 1647 aa19.47■□□□□ 0.71
SRL-203ENST00000572111 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
SRL-203ENST00000572111 CFAP53Q96M91 514 aa19.47■□□□□ 0.71
SRL-203ENST00000572111 DDRGK1Q96HY6 314 aa19.46■□□□□ 0.71
SRL-203ENST00000572111 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
SRL-203ENST00000572111 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
SRL-203ENST00000572111 SUPT16HQ9Y5B9 1047 aaKnown RBP19.41■□□□□ 0.7
SRL-203ENST00000572111 FMN1Q68DA7 1419 aa19.41■□□□□ 0.7
SRL-203ENST00000572111 CYB5RLQ6IPT4 315 aa19.41■□□□□ 0.7
SRL-203ENST00000572111 OSCARQ8IYS5 282 aa19.41■□□□□ 0.7
SRL-203ENST00000572111 BECN1Q14457 450 aa19.4■□□□□ 0.7
SRL-203ENST00000572111 DCAF11Q8TEB1 546 aa19.4■□□□□ 0.7
SRL-203ENST00000572111 TRIM44Q96DX7 344 aaPredicted RBP19.4■□□□□ 0.7
SRL-203ENST00000572111 RTN4Q9NQC3 1192 aaKnown RBP19.4■□□□□ 0.7
SRL-203ENST00000572111 SIN3AQ96ST3 1273 aa19.4■□□□□ 0.7
SRL-203ENST00000572111 RAPGEF2Q9Y4G8 1499 aa19.38■□□□□ 0.69
SRL-203ENST00000572111 SAFB2Q14151 953 aaKnown RBP eCLIP19.36■□□□□ 0.69
SRL-203ENST00000572111 MYH16Q9H6N6 1097 aa19.35■□□□□ 0.69
SRL-203ENST00000572111 TNNT2P45379 298 aaPredicted RBP19.35■□□□□ 0.69
SRL-203ENST00000572111 LAS1LQ9Y4W2 734 aaKnown RBP19.35■□□□□ 0.69
SRL-203ENST00000572111 SRPK2P78362 688 aaKnown RBP19.33■□□□□ 0.68
SRL-203ENST00000572111 STK26Q9P289 416 aa19.33■□□□□ 0.68
SRL-203ENST00000572111 VPS8Q8N3P4 1428 aa19.32■□□□□ 0.68
SRL-203ENST00000572111 FHOD3Q2V2M9 1422 aa19.32■□□□□ 0.68
SRL-203ENST00000572111 NCLP19338 710 aaKnown RBP19.31■□□□□ 0.68
SRL-203ENST00000572111 HNRNPMP52272 730 aaKnown RBP eCLIP19.31■□□□□ 0.68
SRL-203ENST00000572111 KANK4Q5T7N3 995 aaPredicted RBP19.31■□□□□ 0.68
SRL-203ENST00000572111 PKD2Q13563 968 aa19.31■□□□□ 0.68
SRL-203ENST00000572111 KIF3BO15066 747 aa19.3■□□□□ 0.68
SRL-203ENST00000572111 SOX12O15370 315 aa19.3■□□□□ 0.68
SRL-203ENST00000572111 MAPK8IP3Q9UPT6 1336 aa19.3■□□□□ 0.68
SRL-203ENST00000572111 NUDCQ9Y266 331 aa19.29■□□□□ 0.68
SRL-203ENST00000572111 SPAG9O60271 1321 aaKnown RBP19.27■□□□□ 0.68
SRL-203ENST00000572111 TMF1P82094 1093 aa19.27■□□□□ 0.67
SRL-203ENST00000572111 NEUROD2Q15784 382 aa19.26■□□□□ 0.67
SRL-203ENST00000572111 ANKRD30AQ9BXX3 1397 aa19.26■□□□□ 0.67
SRL-203ENST00000572111 GOLGA6L22H0YM25 854 aa19.26■□□□□ 0.67
SRL-203ENST00000572111 CC2D1BQ5T0F9 858 aaKnown RBP19.25■□□□□ 0.67
SRL-203ENST00000572111 NOP58Q9Y2X3 529 aaKnown RBP19.25■□□□□ 0.67
SRL-203ENST00000572111 PTPRGP23470 1445 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms