RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
UBFD1-209ENST00000569919 CREBZFQ9NS37 354 aa12.23□□□□□ -0.45
UBFD1-209ENST00000569919 RGL2O15211 777 aa12.22□□□□□ -0.45
UBFD1-209ENST00000569919 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
UBFD1-209ENST00000569919 NUBP1P53384 320 aa12.19□□□□□ -0.46
UBFD1-209ENST00000569919 MNX1P50219 401 aaPredicted RBP12.16□□□□□ -0.46
UBFD1-209ENST00000569919 GSE1Q14687 1217 aa12.15□□□□□ -0.46
UBFD1-209ENST00000569919 TRIM41Q8WV44 630 aa12.15□□□□□ -0.46
UBFD1-209ENST00000569919 CUX2O14529 1486 aa12.14□□□□□ -0.47
UBFD1-209ENST00000569919 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
UBFD1-209ENST00000569919 DCAF8Q5TAQ9 597 aa12.12□□□□□ -0.47
UBFD1-209ENST00000569919 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
UBFD1-209ENST00000569919 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
UBFD1-209ENST00000569919 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
UBFD1-209ENST00000569919 FAM212AQ96EL1 285 aa12.06□□□□□ -0.48
UBFD1-209ENST00000569919 ERCC6Q03468 1493 aa12.05□□□□□ -0.48
UBFD1-209ENST00000569919 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
UBFD1-209ENST00000569919 RASEFQ8IZ41 740 aa12.03□□□□□ -0.48
UBFD1-209ENST00000569919 RNF25Q96BH1 459 aaPredicted RBP12.02□□□□□ -0.49
UBFD1-209ENST00000569919 CHADLQ6NUI6 762 aa12□□□□□ -0.49
UBFD1-209ENST00000569919 PAXIP1Q6ZW49 1069 aaPredicted RBP12□□□□□ -0.49
UBFD1-209ENST00000569919 NCAPD3P42695 1498 aa11.97□□□□□ -0.49
UBFD1-209ENST00000569919 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
UBFD1-209ENST00000569919 RIOK3O14730 519 aaKnown RBP11.95□□□□□ -0.5
UBFD1-209ENST00000569919 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
UBFD1-209ENST00000569919 HS6ST3Q8IZP7 471 aa11.94□□□□□ -0.5
UBFD1-209ENST00000569919 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
UBFD1-209ENST00000569919 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
UBFD1-209ENST00000569919 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
UBFD1-209ENST00000569919 PYGBP11216 843 aa11.9□□□□□ -0.5
UBFD1-209ENST00000569919 PRKAR2AP13861 404 aaKnown RBP11.9□□□□□ -0.5
UBFD1-209ENST00000569919 FXR2P51116 673 aaKnown RBP eCLIP11.88□□□□□ -0.51
UBFD1-209ENST00000569919 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
UBFD1-209ENST00000569919 TSPYL2Q9H2G4 693 aaPredicted RBP11.87□□□□□ -0.51
UBFD1-209ENST00000569919 VGFO15240 615 aaPredicted RBP11.86□□□□□ -0.51
UBFD1-209ENST00000569919 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
UBFD1-209ENST00000569919 STK25O00506 426 aa11.83□□□□□ -0.52
UBFD1-209ENST00000569919 CHRDL2Q6WN34 429 aa11.83□□□□□ -0.52
UBFD1-209ENST00000569919 NESP48681 1621 aa11.82□□□□□ -0.52
UBFD1-209ENST00000569919 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
UBFD1-209ENST00000569919 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
UBFD1-209ENST00000569919 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
UBFD1-209ENST00000569919 KDM2AQ9Y2K7 1162 aa11.79□□□□□ -0.52
UBFD1-209ENST00000569919 HMGXB3Q12766 1538 aa11.79□□□□□ -0.52
UBFD1-209ENST00000569919 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.78□□□□□ -0.52
UBFD1-209ENST00000569919 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
UBFD1-209ENST00000569919 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
UBFD1-209ENST00000569919 ZFP91Q96JP5 570 aaPredicted RBP11.78□□□□□ -0.52
UBFD1-209ENST00000569919 BCL11BQ9C0K0 894 aaPredicted RBP11.76□□□□□ -0.53
UBFD1-209ENST00000569919 STK24Q9Y6E0 443 aa11.75□□□□□ -0.53
UBFD1-209ENST00000569919 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
UBFD1-209ENST00000569919 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
UBFD1-209ENST00000569919 THOC2Q8NI27 1593 aaKnown RBP11.72□□□□□ -0.53
UBFD1-209ENST00000569919 PDS5BQ9NTI5 1447 aa11.72□□□□□ -0.53
UBFD1-209ENST00000569919 LAMC3Q9Y6N6 1575 aa11.71□□□□□ -0.53
UBFD1-209ENST00000569919 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.53
UBFD1-209ENST00000569919 GTPBP6O43824 516 aaPredicted RBP11.71□□□□□ -0.53
UBFD1-209ENST00000569919 SMARCA4P51532 1647 aa11.71□□□□□ -0.54
UBFD1-209ENST00000569919 PAK3O75914 559 aaPredicted RBP11.7□□□□□ -0.54
UBFD1-209ENST00000569919 PCDHB8Q9UN66 801 aa11.69□□□□□ -0.54
UBFD1-209ENST00000569919 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
UBFD1-209ENST00000569919 PDAP1Q13442 181 aaKnown RBP11.66□□□□□ -0.54
UBFD1-209ENST00000569919 BCANQ96GW7 911 aa11.65□□□□□ -0.54
UBFD1-209ENST00000569919 BAZ1AQ9NRL2 1556 aaPredicted RBP11.64□□□□□ -0.55
UBFD1-209ENST00000569919 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
UBFD1-209ENST00000569919 PEG3Q9GZU2 1588 aa11.62□□□□□ -0.55
UBFD1-209ENST00000569919 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
UBFD1-209ENST00000569919 PSEN1P49768 467 aa11.61□□□□□ -0.55
UBFD1-209ENST00000569919 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
UBFD1-209ENST00000569919 CADPSQ9ULU8 1353 aa11.6□□□□□ -0.55
UBFD1-209ENST00000569919 MAP3K13O43283 966 aa11.6□□□□□ -0.55
UBFD1-209ENST00000569919 KIF12Q96FN5 646 aa11.6□□□□□ -0.55
UBFD1-209ENST00000569919 IFNL1Q8IU54 200 aa11.59□□□□□ -0.55
UBFD1-209ENST00000569919 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
UBFD1-209ENST00000569919 CD44P16070 742 aaKnown RBP11.58□□□□□ -0.56
UBFD1-209ENST00000569919 MRC2Q9UBG0 1479 aa11.57□□□□□ -0.56
UBFD1-209ENST00000569919 WDR62O43379 1518 aa11.53□□□□□ -0.56
UBFD1-209ENST00000569919 PHF12Q96QT6 1004 aa11.52□□□□□ -0.57
UBFD1-209ENST00000569919 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
UBFD1-209ENST00000569919 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
UBFD1-209ENST00000569919 CEP164Q9UPV0 1460 aa11.46□□□□□ -0.57
UBFD1-209ENST00000569919 CABP2Q9NPB3 220 aa11.46□□□□□ -0.57
UBFD1-209ENST00000569919 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
UBFD1-209ENST00000569919 EFCAB3Q8N7B9 438 aa11.45□□□□□ -0.58
UBFD1-209ENST00000569919 FANCD2Q9BXW9 1451 aa11.43□□□□□ -0.58
UBFD1-209ENST00000569919 SOX12O15370 315 aa11.41□□□□□ -0.58
UBFD1-209ENST00000569919 NLRP6P59044 892 aa11.39□□□□□ -0.59
UBFD1-209ENST00000569919 FBXO22Q8NEZ5 403 aa11.39□□□□□ -0.59
UBFD1-209ENST00000569919 MS4A3Q96HJ5 214 aa11.39□□□□□ -0.59
UBFD1-209ENST00000569919 PHF8Q9UPP1 1060 aa11.39□□□□□ -0.59
UBFD1-209ENST00000569919 CADPS2Q86UW7 1296 aa11.38□□□□□ -0.59
UBFD1-209ENST00000569919 PPP1R37O75864 691 aa11.37□□□□□ -0.59
UBFD1-209ENST00000569919 NBR1Q14596 966 aa11.37□□□□□ -0.59
UBFD1-209ENST00000569919 POTEHQ6S545 545 aa11.37□□□□□ -0.59
UBFD1-209ENST00000569919 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
UBFD1-209ENST00000569919 TRPC6Q9Y210 931 aa11.37□□□□□ -0.59
UBFD1-209ENST00000569919 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
UBFD1-209ENST00000569919 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
UBFD1-209ENST00000569919 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
UBFD1-209ENST00000569919 CFTRP13569 1480 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms