RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 CC2D2AQ9P2K1 1620 aa9.13□□□□□ -0.95
CNOT1-219ENST00000569882 SPDYE4A6NLX3 237 aa9.11□□□□□ -0.95
CNOT1-219ENST00000569882 CECR2Q9BXF3 1484 aa9.08□□□□□ -0.96
CNOT1-219ENST00000569882 FARP1Q9Y4F1 1045 aaPredicted RBP9.05□□□□□ -0.96
CNOT1-219ENST00000569882 ZNF579Q8NAF0 562 aaKnown RBP8.99□□□□□ -0.97
CNOT1-219ENST00000569882 ZRANB1Q9UGI0 708 aa8.98□□□□□ -0.97
CNOT1-219ENST00000569882 POTEB2H3BUK9 544 aa8.97□□□□□ -0.97
CNOT1-219ENST00000569882 BAZ1AQ9NRL2 1556 aaPredicted RBP8.95□□□□□ -0.98
CNOT1-219ENST00000569882 SMARCA4P51532 1647 aa8.94□□□□□ -0.98
CNOT1-219ENST00000569882 SMARCA2P51531 1590 aa8.92□□□□□ -0.98
CNOT1-219ENST00000569882 GALR2O43603 387 aaPredicted RBP8.92□□□□□ -0.98
CNOT1-219ENST00000569882 PROM2Q8N271 834 aa8.91□□□□□ -0.98
CNOT1-219ENST00000569882 FAM163AQ96GL9 167 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-219ENST00000569882 STAG3Q9UJ98 1225 aa8.9□□□□□ -0.98
CNOT1-219ENST00000569882 MAMSTRQ6ZN01 415 aa8.89□□□□□ -0.99
CNOT1-219ENST00000569882 CREBZFQ9NS37 354 aa8.88□□□□□ -0.99
CNOT1-219ENST00000569882 BAZ1BQ9UIG0 1483 aaKnown RBP8.88□□□□□ -0.99
CNOT1-219ENST00000569882 ATAD2BQ9ULI0 1458 aa8.88□□□□□ -0.99
CNOT1-219ENST00000569882 NCAPD3P42695 1498 aa8.86□□□□□ -0.99
CNOT1-219ENST00000569882 PAK3O75914 559 aaPredicted RBP8.85□□□□□ -0.99
CNOT1-219ENST00000569882 FKBP8Q14318 412 aa8.85□□□□□ -0.99
CNOT1-219ENST00000569882 HMGXB3Q12766 1538 aa8.85□□□□□ -0.99
CNOT1-219ENST00000569882 MROH2BQ7Z745 1585 aa8.84□□□□□ -0.99
CNOT1-219ENST00000569882 SCUBE2Q9NQ36 999 aa8.82□□□□□ -1
CNOT1-219ENST00000569882 METRNQ9UJH8 293 aa8.81□□□□□ -1
CNOT1-219ENST00000569882 PEG3Q9GZU2 1588 aa8.8□□□□□ -1
CNOT1-219ENST00000569882 ERCC6Q03468 1493 aa8.79□□□□□ -1
CNOT1-219ENST00000569882 WIZO95785 1651 aa8.78□□□□□ -1
CNOT1-219ENST00000569882 C7P10643 843 aa8.77□□□□□ -1.01
CNOT1-219ENST00000569882 LCE2DQ5TA82 110 aaPredicted RBP8.77□□□□□ -1.01
CNOT1-219ENST00000569882 PELP1Q8IZL8 1130 aaKnown RBP8.77□□□□□ -1.01
CNOT1-219ENST00000569882 SLC39A7Q92504 469 aa8.77□□□□□ -1.01
CNOT1-219ENST00000569882 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
CNOT1-219ENST00000569882 CDAN1Q8IWY9 1227 aa8.76□□□□□ -1.01
CNOT1-219ENST00000569882 PHF12Q96QT6 1004 aa8.76□□□□□ -1.01
CNOT1-219ENST00000569882 RSF1Q96T23 1441 aaPredicted RBP8.71□□□□□ -1.01
CNOT1-219ENST00000569882 POTEJP0CG39 1038 aa8.7□□□□□ -1.02
CNOT1-219ENST00000569882 LAMC3Q9Y6N6 1575 aa8.69□□□□□ -1.02
CNOT1-219ENST00000569882 NESP48681 1621 aa8.69□□□□□ -1.02
CNOT1-219ENST00000569882 TOP2AP11388 1531 aaKnown RBP8.69□□□□□ -1.02
CNOT1-219ENST00000569882 ASTLQ6HA08 431 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-219ENST00000569882 MIER1Q8N108 512 aa8.68□□□□□ -1.02
CNOT1-219ENST00000569882 PDS5BQ9NTI5 1447 aa8.66□□□□□ -1.02
CNOT1-219ENST00000569882 NPM1P06748 294 aaKnown RBP eCLIP8.65□□□□□ -1.02
CNOT1-219ENST00000569882 ATMINO43313 823 aaPredicted RBP8.64□□□□□ -1.03
CNOT1-219ENST00000569882 KIF21AQ7Z4S6 1674 aa8.64□□□□□ -1.03
CNOT1-219ENST00000569882 CADPSQ9ULU8 1353 aa8.63□□□□□ -1.03
CNOT1-219ENST00000569882 CUX2O14529 1486 aa8.63□□□□□ -1.03
CNOT1-219ENST00000569882 SUPT5HO00267 1087 aaKnown RBP8.61□□□□□ -1.03
CNOT1-219ENST00000569882 PLCD3Q8N3E9 789 aa8.61□□□□□ -1.03
CNOT1-219ENST00000569882 MS4A3Q96HJ5 214 aa8.61□□□□□ -1.03
CNOT1-219ENST00000569882 CEP164Q9UPV0 1460 aa8.59□□□□□ -1.03
CNOT1-219ENST00000569882 MMRN1Q13201 1228 aa8.59□□□□□ -1.03
CNOT1-219ENST00000569882 PRDM2Q13029 1718 aa8.58□□□□□ -1.04
CNOT1-219ENST00000569882 PLEKHG5O94827 1062 aa8.58□□□□□ -1.04
CNOT1-219ENST00000569882 THOC2Q8NI27 1593 aaKnown RBP8.57□□□□□ -1.04
CNOT1-219ENST00000569882 TSPYL2Q9H2G4 693 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-219ENST00000569882 FANCD2Q9BXW9 1451 aa8.57□□□□□ -1.04
CNOT1-219ENST00000569882 CCDC88BA6NC98 1476 aa8.56□□□□□ -1.04
CNOT1-219ENST00000569882 MRC2Q9UBG0 1479 aa8.56□□□□□ -1.04
CNOT1-219ENST00000569882 RASEFQ8IZ41 740 aa8.55□□□□□ -1.04
CNOT1-219ENST00000569882 CFTRP13569 1480 aa8.55□□□□□ -1.04
CNOT1-219ENST00000569882 FBXO3Q9UK99 471 aa8.54□□□□□ -1.04
CNOT1-219ENST00000569882 ATN1P54259 1190 aaPredicted RBP8.52□□□□□ -1.05
CNOT1-219ENST00000569882 SPNS2Q8IVW8 549 aa8.52□□□□□ -1.05
CNOT1-219ENST00000569882 CCDC61Q9Y6R9 512 aa8.52□□□□□ -1.05
CNOT1-219ENST00000569882 NUBP1P53384 320 aa8.5□□□□□ -1.05
CNOT1-219ENST00000569882 WDR62O43379 1518 aa8.49□□□□□ -1.05
CNOT1-219ENST00000569882 SEC24BO95487 1268 aa8.49□□□□□ -1.05
CNOT1-219ENST00000569882 VASPP50552 380 aaPredicted RBP8.49□□□□□ -1.05
CNOT1-219ENST00000569882 ZBTB47Q9UFB7 747 aaPredicted RBP8.48□□□□□ -1.05
CNOT1-219ENST00000569882 ST18O60284 1047 aa8.47□□□□□ -1.05
CNOT1-219ENST00000569882 KIF12Q96FN5 646 aa8.45□□□□□ -1.06
CNOT1-219ENST00000569882 URB2Q14146 1524 aaKnown RBP8.44□□□□□ -1.06
CNOT1-219ENST00000569882 ABCC8Q09428 1581 aa8.44□□□□□ -1.06
CNOT1-219ENST00000569882 POTEFA5A3E0 1075 aa8.43□□□□□ -1.06
CNOT1-219ENST00000569882 SLAIN1Q8ND83 568 aa8.43□□□□□ -1.06
CNOT1-219ENST00000569882 MAP3K13O43283 966 aa8.42□□□□□ -1.06
CNOT1-219ENST00000569882 DNMBPQ6XZF7 1577 aa8.41□□□□□ -1.06
CNOT1-219ENST00000569882 KLHL34Q8N239 644 aa8.41□□□□□ -1.06
CNOT1-219ENST00000569882 TOPBP1Q92547 1522 aa8.4□□□□□ -1.06
CNOT1-219ENST00000569882 BMP2KQ9NSY1 1161 aaPredicted RBP8.4□□□□□ -1.06
CNOT1-219ENST00000569882 TRPC6Q9Y210 931 aa8.4□□□□□ -1.06
CNOT1-219ENST00000569882 IFNLR1Q8IU57 520 aaPredicted RBP8.39□□□□□ -1.07
CNOT1-219ENST00000569882 FAM212AQ96EL1 285 aa8.39□□□□□ -1.07
CNOT1-219ENST00000569882 IFT140Q96RY7 1462 aa8.38□□□□□ -1.07
CNOT1-219ENST00000569882 DCAF8Q5TAQ9 597 aa8.37□□□□□ -1.07
CNOT1-219ENST00000569882 DNAJC5Q9H3Z4 198 aa8.37□□□□□ -1.07
CNOT1-219ENST00000569882 TMEM121BQ9BXQ6 578 aaPredicted RBP8.36□□□□□ -1.07
CNOT1-219ENST00000569882 COLQQ9Y215 455 aaPredicted RBP8.36□□□□□ -1.07
CNOT1-219ENST00000569882 TIE1P35590 1138 aa8.35□□□□□ -1.07
CNOT1-219ENST00000569882 PYGBP11216 843 aa8.34□□□□□ -1.07
CNOT1-219ENST00000569882 PCDHB13Q9Y5F0 798 aa8.34□□□□□ -1.07
CNOT1-219ENST00000569882 EIF4G3O43432 1585 aaKnown RBP8.33□□□□□ -1.08
CNOT1-219ENST00000569882 POLA1P09884 1462 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-219ENST00000569882 FGD5Q6ZNL6 1462 aa8.32□□□□□ -1.08
CNOT1-219ENST00000569882 SOGA1O94964 1423 aa8.32□□□□□ -1.08
CNOT1-219ENST00000569882 IFNL1Q8IU54 200 aa8.32□□□□□ -1.08
CNOT1-219ENST00000569882 CUX1P39880 1505 aa8.31□□□□□ -1.08
CNOT1-219ENST00000569882 ZNF608Q9ULD9 1512 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms