RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 GABBR2O75899 941 aa11.54□□□□□ -0.56
HERC2-211ENST00000569335 ZRANB1Q9UGI0 708 aa11.54□□□□□ -0.56
HERC2-211ENST00000569335 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
HERC2-211ENST00000569335 NUBP1P53384 320 aa11.51□□□□□ -0.57
HERC2-211ENST00000569335 RASEFQ8IZ41 740 aa11.5□□□□□ -0.57
HERC2-211ENST00000569335 NACADO15069 1562 aa11.5□□□□□ -0.57
HERC2-211ENST00000569335 TSPYL2Q9H2G4 693 aaPredicted RBP11.48□□□□□ -0.57
HERC2-211ENST00000569335 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
HERC2-211ENST00000569335 DCAF8L2P0C7V8 631 aa11.42□□□□□ -0.58
HERC2-211ENST00000569335 PHF12Q96QT6 1004 aa11.41□□□□□ -0.58
HERC2-211ENST00000569335 CCDC61Q9Y6R9 512 aa11.41□□□□□ -0.58
HERC2-211ENST00000569335 FAM212AQ96EL1 285 aa11.4□□□□□ -0.58
HERC2-211ENST00000569335 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
HERC2-211ENST00000569335 GALR2O43603 387 aaPredicted RBP11.34□□□□□ -0.59
HERC2-211ENST00000569335 ABCC9O60706 1549 aa11.34□□□□□ -0.59
HERC2-211ENST00000569335 GSE1Q14687 1217 aa11.32□□□□□ -0.6
HERC2-211ENST00000569335 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
HERC2-211ENST00000569335 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
HERC2-211ENST00000569335 POTEIP0CG38 1075 aa11.3□□□□□ -0.6
HERC2-211ENST00000569335 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
HERC2-211ENST00000569335 RB1CC1Q8TDY2 1594 aa11.29□□□□□ -0.6
HERC2-211ENST00000569335 SCRIBQ14160 1630 aa11.27□□□□□ -0.61
HERC2-211ENST00000569335 MAP3K13O43283 966 aa11.26□□□□□ -0.61
HERC2-211ENST00000569335 PYGBP11216 843 aa11.26□□□□□ -0.61
HERC2-211ENST00000569335 DCBLD2Q96PD2 775 aa11.26□□□□□ -0.61
HERC2-211ENST00000569335 SUPT5HO00267 1087 aaKnown RBP11.25□□□□□ -0.61
HERC2-211ENST00000569335 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
HERC2-211ENST00000569335 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
HERC2-211ENST00000569335 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
HERC2-211ENST00000569335 ASTLQ6HA08 431 aaPredicted RBP11.19□□□□□ -0.62
HERC2-211ENST00000569335 RSF1Q96T23 1441 aaPredicted RBP11.17□□□□□ -0.62
HERC2-211ENST00000569335 IFNL1Q8IU54 200 aa11.16□□□□□ -0.62
HERC2-211ENST00000569335 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.62
HERC2-211ENST00000569335 TIE1P35590 1138 aa11.15□□□□□ -0.62
HERC2-211ENST00000569335 PKD2Q13563 968 aa11.14□□□□□ -0.63
HERC2-211ENST00000569335 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
HERC2-211ENST00000569335 TRPC6Q9Y210 931 aa11.14□□□□□ -0.63
HERC2-211ENST00000569335 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
HERC2-211ENST00000569335 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
HERC2-211ENST00000569335 ECM2O94769 699 aaPredicted RBP11.09□□□□□ -0.63
HERC2-211ENST00000569335 PELP1Q8IZL8 1130 aaKnown RBP11.09□□□□□ -0.63
HERC2-211ENST00000569335 ZNF467Q7Z7K2 595 aaPredicted RBP11.08□□□□□ -0.64
HERC2-211ENST00000569335 ATN1P54259 1190 aaPredicted RBP11.07□□□□□ -0.64
HERC2-211ENST00000569335 TTLL13PA6NNM8 815 aa11.06□□□□□ -0.64
HERC2-211ENST00000569335 LHX8Q68G74 356 aa11.05□□□□□ -0.64
HERC2-211ENST00000569335 SLC39A7Q92504 469 aa11.05□□□□□ -0.64
HERC2-211ENST00000569335 RNF25Q96BH1 459 aaPredicted RBP11.05□□□□□ -0.64
HERC2-211ENST00000569335 C7P10643 843 aa11.03□□□□□ -0.64
HERC2-211ENST00000569335 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
HERC2-211ENST00000569335 METRNQ9UJH8 293 aa11.02□□□□□ -0.65
HERC2-211ENST00000569335 UNC13AQ9UPW8 1703 aa11.01□□□□□ -0.65
HERC2-211ENST00000569335 RIOK3O14730 519 aaKnown RBP11.01□□□□□ -0.65
HERC2-211ENST00000569335 TMEM106CQ9BVX2 250 aa11.01□□□□□ -0.65
HERC2-211ENST00000569335 CECR2Q9BXF3 1484 aa11□□□□□ -0.65
HERC2-211ENST00000569335 MROH2BQ7Z745 1585 aa11□□□□□ -0.65
HERC2-211ENST00000569335 RGL2O15211 777 aa11□□□□□ -0.65
HERC2-211ENST00000569335 PSEN1P49768 467 aa10.99□□□□□ -0.65
HERC2-211ENST00000569335 PDAP1Q13442 181 aaKnown RBP10.98□□□□□ -0.65
HERC2-211ENST00000569335 IER5LQ5T953 404 aa10.98□□□□□ -0.65
HERC2-211ENST00000569335 TRIM35Q9UPQ4 493 aa10.97□□□□□ -0.65
HERC2-211ENST00000569335 RTN4Q9NQC3 1192 aaKnown RBP10.95□□□□□ -0.66
HERC2-211ENST00000569335 BICRAQ9NZM4 1560 aa10.94□□□□□ -0.66
HERC2-211ENST00000569335 AMER1Q5JTC6 1135 aaPredicted RBP10.94□□□□□ -0.66
HERC2-211ENST00000569335 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
HERC2-211ENST00000569335 SMARCA4P51532 1647 aa10.92□□□□□ -0.66
HERC2-211ENST00000569335 POTEB2H3BUK9 544 aa10.92□□□□□ -0.66
HERC2-211ENST00000569335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.91□□□□□ -0.66
HERC2-211ENST00000569335 POTEFA5A3E0 1075 aa10.91□□□□□ -0.66
HERC2-211ENST00000569335 ZFP91Q96JP5 570 aaPredicted RBP10.91□□□□□ -0.66
HERC2-211ENST00000569335 PEG3Q9GZU2 1588 aa10.9□□□□□ -0.67
HERC2-211ENST00000569335 TAOK2Q9UL54 1235 aa10.88□□□□□ -0.67
HERC2-211ENST00000569335 WIZO95785 1651 aa10.88□□□□□ -0.67
HERC2-211ENST00000569335 TOP2AP11388 1531 aaKnown RBP10.87□□□□□ -0.67
HERC2-211ENST00000569335 CABP2Q9NPB3 220 aa10.86□□□□□ -0.67
HERC2-211ENST00000569335 IRX5P78411 483 aaPredicted RBP10.85□□□□□ -0.67
HERC2-211ENST00000569335 COLQQ9Y215 455 aaPredicted RBP10.85□□□□□ -0.67
HERC2-211ENST00000569335 GOLGA2Q08379 1002 aa10.84□□□□□ -0.67
HERC2-211ENST00000569335 STK25O00506 426 aa10.83□□□□□ -0.68
HERC2-211ENST00000569335 SEC24BO95487 1268 aa10.83□□□□□ -0.68
HERC2-211ENST00000569335 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
HERC2-211ENST00000569335 BCL11BQ9C0K0 894 aaPredicted RBP10.83□□□□□ -0.68
HERC2-211ENST00000569335 OTUD5Q96G74 571 aa10.82□□□□□ -0.68
HERC2-211ENST00000569335 EIF4G1Q04637 1599 aaKnown RBP10.82□□□□□ -0.68
HERC2-211ENST00000569335 MKRN3Q13064 507 aaKnown RBP10.81□□□□□ -0.68
HERC2-211ENST00000569335 MAMSTRQ6ZN01 415 aa10.81□□□□□ -0.68
HERC2-211ENST00000569335 STK24Q9Y6E0 443 aa10.81□□□□□ -0.68
HERC2-211ENST00000569335 PLCG2P16885 1265 aa10.79□□□□□ -0.68
HERC2-211ENST00000569335 EFCAB3Q8N7B9 438 aa10.79□□□□□ -0.68
HERC2-211ENST00000569335 OCEL1Q9H607 264 aa10.78□□□□□ -0.68
HERC2-211ENST00000569335 CHGAP10645 457 aaKnown RBP10.77□□□□□ -0.69
HERC2-211ENST00000569335 ILDR1Q86SU0 546 aaPredicted RBP10.77□□□□□ -0.69
HERC2-211ENST00000569335 SMARCA2P51531 1590 aa10.75□□□□□ -0.69
HERC2-211ENST00000569335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.75□□□□□ -0.69
HERC2-211ENST00000569335 HS6ST3Q8IZP7 471 aa10.74□□□□□ -0.69
HERC2-211ENST00000569335 PDCD7Q8N8D1 485 aaKnown RBP10.74□□□□□ -0.69
HERC2-211ENST00000569335 SCUBE2Q9NQ36 999 aa10.74□□□□□ -0.69
HERC2-211ENST00000569335 CCDC88BA6NC98 1476 aa10.72□□□□□ -0.69
HERC2-211ENST00000569335 ATAD2BQ9ULI0 1458 aa10.7□□□□□ -0.7
HERC2-211ENST00000569335 SOX12O15370 315 aa10.7□□□□□ -0.7
HERC2-211ENST00000569335 PHF8Q9UPP1 1060 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms