RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
SMG1-216ENST00000569122 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
SMG1-216ENST00000569122 KIF13AQ9H1H9 1805 aa15.64■□□□□ 0.09
SMG1-216ENST00000569122 KDM6BO15054 1643 aa15.59■□□□□ 0.09
SMG1-216ENST00000569122 DIP2BQ9P265 1576 aa15.58■□□□□ 0.08
SMG1-216ENST00000569122 TOP2BQ02880 1626 aa15.56■□□□□ 0.08
SMG1-216ENST00000569122 KIAA0586Q9BVV6 1533 aa15.52■□□□□ 0.07
SMG1-216ENST00000569122 PTPRGP23470 1445 aa15.51■□□□□ 0.07
SMG1-216ENST00000569122 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
SMG1-216ENST00000569122 ADCY10Q96PN6 1610 aa15.5■□□□□ 0.07
SMG1-216ENST00000569122 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
SMG1-216ENST00000569122 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
SMG1-216ENST00000569122 PLB1Q6P1J6 1458 aa15.46■□□□□ 0.07
SMG1-216ENST00000569122 CARMIL2Q6F5E8 1435 aa15.44■□□□□ 0.06
SMG1-216ENST00000569122 ADGRL1O94910 1474 aa15.44■□□□□ 0.06
SMG1-216ENST00000569122 TNIKQ9UKE5 1360 aa15.43■□□□□ 0.06
SMG1-216ENST00000569122 IGF1RP08069 1367 aa15.42■□□□□ 0.06
SMG1-216ENST00000569122 ABCC2Q92887 1545 aa15.42■□□□□ 0.06
SMG1-216ENST00000569122 ASXL2Q76L83 1435 aa15.41■□□□□ 0.06
SMG1-216ENST00000569122 TTBK1Q5TCY1 1321 aaPredicted RBP15.41■□□□□ 0.06
SMG1-216ENST00000569122 KIF27Q86VH2 1401 aa15.39■□□□□ 0.05
SMG1-216ENST00000569122 GLI2P10070 1586 aa15.39■□□□□ 0.05
SMG1-216ENST00000569122 TSPOAP1O95153 1857 aa15.37■□□□□ 0.05
SMG1-216ENST00000569122 TEX14Q8IWB6 1497 aa15.37■□□□□ 0.05
SMG1-216ENST00000569122 UHRF1BP1LA0JNW5 1464 aa15.35■□□□□ 0.05
SMG1-216ENST00000569122 UACAQ9BZF9 1416 aa15.34■□□□□ 0.05
SMG1-216ENST00000569122 FBXO41Q8TF61 875 aa15.34■□□□□ 0.05
SMG1-216ENST00000569122 CARMIL1Q5VZK9 1371 aa15.33■□□□□ 0.04
SMG1-216ENST00000569122 HECW2Q9P2P5 1572 aa15.32■□□□□ 0.04
SMG1-216ENST00000569122 COL17A1Q9UMD9 1497 aaPredicted RBP15.3■□□□□ 0.04
SMG1-216ENST00000569122 CUL7Q14999 1698 aa15.29■□□□□ 0.04
SMG1-216ENST00000569122 EPRSP07814 1512 aaKnown RBP15.29■□□□□ 0.04
SMG1-216ENST00000569122 KDM5BQ9UGL1 1544 aa15.26■□□□□ 0.03
SMG1-216ENST00000569122 PPRC1Q5VV67 1664 aaKnown RBP15.23■□□□□ 0.03
SMG1-216ENST00000569122 IQGAP2Q13576 1575 aa15.21■□□□□ 0.03
SMG1-216ENST00000569122 MAP3K4Q9Y6R4 1608 aa15.2■□□□□ 0.02
SMG1-216ENST00000569122 CD109Q6YHK3 1445 aa15.19■□□□□ 0.02
SMG1-216ENST00000569122 FAM9AQ8IZU1 332 aaPredicted RBP15.19■□□□□ 0.02
SMG1-216ENST00000569122 DISP1Q96F81 1524 aa15.18■□□□□ 0.02
SMG1-216ENST00000569122 WDR7Q9Y4E6 1490 aa15.18■□□□□ 0.02
SMG1-216ENST00000569122 MAGI3Q5TCQ9 1506 aa15.17■□□□□ 0.02
SMG1-216ENST00000569122 KCNH8Q96L42 1107 aa15.16■□□□□ 0.02
SMG1-216ENST00000569122 UGGT2Q9NYU1 1516 aa15.13■□□□□ 0.01
SMG1-216ENST00000569122 PHLDB1Q86UU1 1377 aa15.12■□□□□ 0.01
SMG1-216ENST00000569122 ZCCHC11Q5TAX3 1644 aaKnown RBP15.1■□□□□ 0.01
SMG1-216ENST00000569122 RAPGEF2Q9Y4G8 1499 aa15.1■□□□□ 0.01
SMG1-216ENST00000569122 GOLGA3Q08378 1498 aa15.07■□□□□ 0
SMG1-216ENST00000569122 ARAP3Q8WWN8 1544 aa15.06■□□□□ 0
SMG1-216ENST00000569122 PTPRMP28827 1452 aa15.05■□□□□ -0
SMG1-216ENST00000569122 KIAA0556O60303 1618 aa15.04■□□□□ -0
SMG1-216ENST00000569122 CFAP43Q8NDM7 1665 aa15.03■□□□□ -0
SMG1-216ENST00000569122 ARID4BQ4LE39 1312 aaPredicted RBP15.03■□□□□ -0
SMG1-216ENST00000569122 LMTK3Q96Q04 1460 aa15□□□□□ -0.01
SMG1-216ENST00000569122 RAPGEF3O95398 923 aa14.98□□□□□ -0.01
SMG1-216ENST00000569122 ABCA8O94911 1581 aa14.96□□□□□ -0.01
SMG1-216ENST00000569122 KIF21BO75037 1637 aa14.95□□□□□ -0.02
SMG1-216ENST00000569122 PCF11O94913 1555 aaKnown RBP14.95□□□□□ -0.02
SMG1-216ENST00000569122 CERKQ8TCT0 537 aa14.95□□□□□ -0.02
SMG1-216ENST00000569122 NEO1Q92859 1461 aa14.94□□□□□ -0.02
SMG1-216ENST00000569122 ADAMTSL3P82987 1691 aa14.93□□□□□ -0.02
SMG1-216ENST00000569122 POGZQ7Z3K3 1410 aa14.91□□□□□ -0.02
SMG1-216ENST00000569122 ATP10BO94823 1461 aa14.9□□□□□ -0.02
SMG1-216ENST00000569122 ARID3CA6NKF2 412 aa14.9□□□□□ -0.02
SMG1-216ENST00000569122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.9□□□□□ -0.02
SMG1-216ENST00000569122 HNRNPUL2Q1KMD3 747 aaKnown RBP14.9□□□□□ -0.02
SMG1-216ENST00000569122 SOCS7O14512 581 aa14.89□□□□□ -0.03
SMG1-216ENST00000569122 HSPA2P54652 639 aa14.87□□□□□ -0.03
SMG1-216ENST00000569122 DMRT2Q9Y5R5 561 aa14.87□□□□□ -0.03
SMG1-216ENST00000569122 DISP3Q9P2K9 1392 aa14.85□□□□□ -0.03
SMG1-216ENST00000569122 DENND4BO75064 1496 aaPredicted RBP14.84□□□□□ -0.03
SMG1-216ENST00000569122 BCORL1Q5H9F3 1711 aa14.84□□□□□ -0.03
SMG1-216ENST00000569122 P3H3Q8IVL6 736 aa14.84□□□□□ -0.03
SMG1-216ENST00000569122 ABCA9Q8IUA7 1624 aa14.84□□□□□ -0.03
SMG1-216ENST00000569122 AKNAQ7Z591 1439 aa14.83□□□□□ -0.03
SMG1-216ENST00000569122 PLEKHD1A6NEE1 506 aa14.83□□□□□ -0.04
SMG1-216ENST00000569122 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
SMG1-216ENST00000569122 FANCAO15360 1455 aa14.82□□□□□ -0.04
SMG1-216ENST00000569122 MADDQ8WXG6 1647 aa14.81□□□□□ -0.04
SMG1-216ENST00000569122 FHOD3Q2V2M9 1422 aa14.81□□□□□ -0.04
SMG1-216ENST00000569122 PRXQ9BXM0 1461 aa14.8□□□□□ -0.04
SMG1-216ENST00000569122 CTTNBP2Q8WZ74 1663 aa14.78□□□□□ -0.04
SMG1-216ENST00000569122 ILDR2Q71H61 639 aa14.78□□□□□ -0.04
SMG1-216ENST00000569122 MAGI2Q86UL8 1455 aa14.77□□□□□ -0.04
SMG1-216ENST00000569122 ARHGEF40Q8TER5 1519 aa14.76□□□□□ -0.05
SMG1-216ENST00000569122 MLECQ14165 292 aa14.76□□□□□ -0.05
SMG1-216ENST00000569122 YEATS2Q9ULM3 1422 aa14.75□□□□□ -0.05
SMG1-216ENST00000569122 FRMPD1Q5SYB0 1578 aa14.74□□□□□ -0.05
SMG1-216ENST00000569122 RIMS1Q86UR5 1692 aaKnown RBP14.73□□□□□ -0.05
SMG1-216ENST00000569122 EFCAB5A4FU69 1503 aa14.72□□□□□ -0.05
SMG1-216ENST00000569122 ZFYVE16Q7Z3T8 1539 aa14.7□□□□□ -0.06
SMG1-216ENST00000569122 CFAP74Q9C0B2 1584 aa14.69□□□□□ -0.06
SMG1-216ENST00000569122 RAPGEF6Q8TEU7 1601 aa14.69□□□□□ -0.06
SMG1-216ENST00000569122 ZMYM4Q5VZL5 1548 aa14.68□□□□□ -0.06
SMG1-216ENST00000569122 NUP153P49790 1475 aaKnown RBP14.68□□□□□ -0.06
SMG1-216ENST00000569122 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
SMG1-216ENST00000569122 ATP10AO60312 1499 aa14.66□□□□□ -0.06
SMG1-216ENST00000569122 EFCAB2Q5VUJ9 269 aa14.66□□□□□ -0.06
SMG1-216ENST00000569122 UHRF1BP1Q6BDS2 1440 aa14.66□□□□□ -0.06
SMG1-216ENST00000569122 SCAPERQ9BY12 1400 aa14.66□□□□□ -0.06
SMG1-216ENST00000569122 CEBPAP49715 358 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms