RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 PLCD3Q8N3E9 789 aa11.17□□□□□ -0.62
TUBGCP4-209ENST00000564511 GALR2O43603 387 aaPredicted RBP11.15□□□□□ -0.62
TUBGCP4-209ENST00000564511 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
TUBGCP4-209ENST00000564511 DCBLD2Q96PD2 775 aa11.1□□□□□ -0.63
TUBGCP4-209ENST00000564511 FBXO3Q9UK99 471 aa11.1□□□□□ -0.63
TUBGCP4-209ENST00000564511 RASEFQ8IZ41 740 aa11.09□□□□□ -0.63
TUBGCP4-209ENST00000564511 CCDC61Q9Y6R9 512 aa11.08□□□□□ -0.64
TUBGCP4-209ENST00000564511 BICRAQ9NZM4 1560 aa11.06□□□□□ -0.64
TUBGCP4-209ENST00000564511 UNC13AQ9UPW8 1703 aa11.06□□□□□ -0.64
TUBGCP4-209ENST00000564511 NUBP1P53384 320 aa11.05□□□□□ -0.64
TUBGCP4-209ENST00000564511 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
TUBGCP4-209ENST00000564511 MS4A3Q96HJ5 214 aa11.03□□□□□ -0.64
TUBGCP4-209ENST00000564511 KIF12Q96FN5 646 aa11.01□□□□□ -0.65
TUBGCP4-209ENST00000564511 LHX8Q68G74 356 aa11□□□□□ -0.65
TUBGCP4-209ENST00000564511 VASPP50552 380 aaPredicted RBP10.98□□□□□ -0.65
TUBGCP4-209ENST00000564511 MYO15BQ96JP2 1530 aa10.97□□□□□ -0.65
TUBGCP4-209ENST00000564511 MAP3K13O43283 966 aa10.96□□□□□ -0.65
TUBGCP4-209ENST00000564511 CECR2Q9BXF3 1484 aa10.95□□□□□ -0.66
TUBGCP4-209ENST00000564511 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
TUBGCP4-209ENST00000564511 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
TUBGCP4-209ENST00000564511 ATMINO43313 823 aaPredicted RBP10.91□□□□□ -0.66
TUBGCP4-209ENST00000564511 ASTLQ6HA08 431 aaPredicted RBP10.91□□□□□ -0.66
TUBGCP4-209ENST00000564511 FAM212AQ96EL1 285 aa10.91□□□□□ -0.66
TUBGCP4-209ENST00000564511 CC2D2AQ9P2K1 1620 aa10.91□□□□□ -0.66
TUBGCP4-209ENST00000564511 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
TUBGCP4-209ENST00000564511 KLHL34Q8N239 644 aa10.89□□□□□ -0.67
TUBGCP4-209ENST00000564511 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
TUBGCP4-209ENST00000564511 ATN1P54259 1190 aaPredicted RBP10.85□□□□□ -0.67
TUBGCP4-209ENST00000564511 SGIP1Q9BQI5 828 aa10.85□□□□□ -0.67
TUBGCP4-209ENST00000564511 BMP2KQ9NSY1 1161 aaPredicted RBP10.85□□□□□ -0.67
TUBGCP4-209ENST00000564511 SHROOM4Q9ULL8 1493 aa10.85□□□□□ -0.67
TUBGCP4-209ENST00000564511 PCDHB13Q9Y5F0 798 aa10.84□□□□□ -0.67
TUBGCP4-209ENST00000564511 POTEB2H3BUK9 544 aa10.83□□□□□ -0.68
TUBGCP4-209ENST00000564511 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
TUBGCP4-209ENST00000564511 EIF4G1Q04637 1599 aaKnown RBP10.82□□□□□ -0.68
TUBGCP4-209ENST00000564511 TIE1P35590 1138 aa10.82□□□□□ -0.68
TUBGCP4-209ENST00000564511 SLC39A7Q92504 469 aa10.81□□□□□ -0.68
TUBGCP4-209ENST00000564511 IFNL1Q8IU54 200 aa10.8□□□□□ -0.68
TUBGCP4-209ENST00000564511 METRNQ9UJH8 293 aa10.8□□□□□ -0.68
TUBGCP4-209ENST00000564511 C7P10643 843 aa10.79□□□□□ -0.68
TUBGCP4-209ENST00000564511 PYGBP11216 843 aa10.79□□□□□ -0.68
TUBGCP4-209ENST00000564511 TTLL13PA6NNM8 815 aa10.78□□□□□ -0.68
TUBGCP4-209ENST00000564511 SCRIBQ14160 1630 aa10.77□□□□□ -0.68
TUBGCP4-209ENST00000564511 GSE1Q14687 1217 aa10.76□□□□□ -0.69
TUBGCP4-209ENST00000564511 ZCCHC6Q5VYS8 1495 aaKnown RBP10.74□□□□□ -0.69
TUBGCP4-209ENST00000564511 SPOCK2Q92563 424 aa10.74□□□□□ -0.69
TUBGCP4-209ENST00000564511 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
TUBGCP4-209ENST00000564511 OTUD5Q96G74 571 aa10.73□□□□□ -0.69
TUBGCP4-209ENST00000564511 POTEFA5A3E0 1075 aa10.72□□□□□ -0.69
TUBGCP4-209ENST00000564511 POTEJP0CG39 1038 aa10.7□□□□□ -0.7
TUBGCP4-209ENST00000564511 PCDHB8Q9UN66 801 aa10.7□□□□□ -0.7
TUBGCP4-209ENST00000564511 TRIM35Q9UPQ4 493 aa10.7□□□□□ -0.7
TUBGCP4-209ENST00000564511 TMEM106CQ9BVX2 250 aa10.69□□□□□ -0.7
TUBGCP4-209ENST00000564511 CHRM1P11229 460 aaPredicted RBP10.68□□□□□ -0.7
TUBGCP4-209ENST00000564511 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
TUBGCP4-209ENST00000564511 COLQQ9Y215 455 aaPredicted RBP10.66□□□□□ -0.7
TUBGCP4-209ENST00000564511 IER5LQ5T953 404 aa10.63□□□□□ -0.71
TUBGCP4-209ENST00000564511 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
TUBGCP4-209ENST00000564511 SEC24BO95487 1268 aa10.61□□□□□ -0.71
TUBGCP4-209ENST00000564511 MAMSTRQ6ZN01 415 aa10.57□□□□□ -0.72
TUBGCP4-209ENST00000564511 IRX5P78411 483 aaPredicted RBP10.55□□□□□ -0.72
TUBGCP4-209ENST00000564511 PSEN1P49768 467 aa10.54□□□□□ -0.72
TUBGCP4-209ENST00000564511 SCUBE2Q9NQ36 999 aa10.53□□□□□ -0.72
TUBGCP4-209ENST00000564511 CUX2O14529 1486 aa10.53□□□□□ -0.72
TUBGCP4-209ENST00000564511 PLCG2P16885 1265 aa10.52□□□□□ -0.73
TUBGCP4-209ENST00000564511 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
TUBGCP4-209ENST00000564511 ERCC6Q03468 1493 aa10.5□□□□□ -0.73
TUBGCP4-209ENST00000564511 PDAP1Q13442 181 aaKnown RBP10.5□□□□□ -0.73
TUBGCP4-209ENST00000564511 OCEL1Q9H607 264 aa10.5□□□□□ -0.73
TUBGCP4-209ENST00000564511 MKRN3Q13064 507 aaKnown RBP10.45□□□□□ -0.74
TUBGCP4-209ENST00000564511 GOLGA2Q08379 1002 aa10.44□□□□□ -0.74
TUBGCP4-209ENST00000564511 PDCD7Q8N8D1 485 aaKnown RBP10.42□□□□□ -0.74
TUBGCP4-209ENST00000564511 CABP2Q9NPB3 220 aa10.41□□□□□ -0.74
TUBGCP4-209ENST00000564511 NCAPD3P42695 1498 aa10.41□□□□□ -0.74
TUBGCP4-209ENST00000564511 RNF25Q96BH1 459 aaPredicted RBP10.4□□□□□ -0.74
TUBGCP4-209ENST00000564511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.4□□□□□ -0.74
TUBGCP4-209ENST00000564511 RIOK3O14730 519 aaKnown RBP10.37□□□□□ -0.75
TUBGCP4-209ENST00000564511 SLAIN1Q8ND83 568 aa10.37□□□□□ -0.75
TUBGCP4-209ENST00000564511 FAM163AQ96GL9 167 aaPredicted RBP10.37□□□□□ -0.75
TUBGCP4-209ENST00000564511 LCE2DQ5TA82 110 aaPredicted RBP10.36□□□□□ -0.75
TUBGCP4-209ENST00000564511 NESP48681 1621 aa10.34□□□□□ -0.75
TUBGCP4-209ENST00000564511 ATAD2BQ9ULI0 1458 aa10.34□□□□□ -0.75
TUBGCP4-209ENST00000564511 POTEMA6NI47 508 aa10.33□□□□□ -0.76
TUBGCP4-209ENST00000564511 DPY19L2Q6NUT2 758 aa10.33□□□□□ -0.76
TUBGCP4-209ENST00000564511 L3MBTL3Q96JM7 780 aaPredicted RBP10.33□□□□□ -0.76
TUBGCP4-209ENST00000564511 POTEGQ6S5H5 508 aa10.32□□□□□ -0.76
TUBGCP4-209ENST00000564511 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
TUBGCP4-209ENST00000564511 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.31□□□□□ -0.76
TUBGCP4-209ENST00000564511 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
TUBGCP4-209ENST00000564511 ZFP91Q96JP5 570 aaPredicted RBP10.31□□□□□ -0.76
TUBGCP4-209ENST00000564511 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.31□□□□□ -0.76
TUBGCP4-209ENST00000564511 PKD2Q13563 968 aa10.29□□□□□ -0.76
TUBGCP4-209ENST00000564511 PLSCR2Q9NRY7 297 aa10.29□□□□□ -0.76
TUBGCP4-209ENST00000564511 SMARCA2P51531 1590 aa10.27□□□□□ -0.76
TUBGCP4-209ENST00000564511 ECM2O94769 699 aaPredicted RBP10.27□□□□□ -0.77
TUBGCP4-209ENST00000564511 HMGXB3Q12766 1538 aa10.26□□□□□ -0.77
TUBGCP4-209ENST00000564511 C3orf67Q6ZVT6 689 aa10.25□□□□□ -0.77
TUBGCP4-209ENST00000564511 BOLA1Q9Y3E2 137 aa10.23□□□□□ -0.77
TUBGCP4-209ENST00000564511 BAZ1BQ9UIG0 1483 aaKnown RBP10.23□□□□□ -0.77
TUBGCP4-209ENST00000564511 THOC2Q8NI27 1593 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms