RNA–Protein interactions for RNA: ENST00000564492.1

LINC00261-202, long intergenic non-protein coding RNA 261, humanhuman

TSL 3 BASIC

Gene LINC00261, Length 4,912 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00261-202ENST00000564492 ERCC6Q03468 1493 aa10.79□□□□□ -0.68
LINC00261-202ENST00000564492 MROH2BQ7Z745 1585 aa10.78□□□□□ -0.68
LINC00261-202ENST00000564492 NAP1L5Q96NT1 182 aaPredicted RBP10.77□□□□□ -0.68
LINC00261-202ENST00000564492 IRX6P78412 446 aaPredicted RBP10.77□□□□□ -0.69
LINC00261-202ENST00000564492 ANP32CO43423 234 aa10.74□□□□□ -0.69
LINC00261-202ENST00000564492 HSP90AA2PQ14568 343 aaPredicted RBP10.74□□□□□ -0.69
LINC00261-202ENST00000564492 HSP90AA1P07900 732 aaKnown RBP10.74□□□□□ -0.69
LINC00261-202ENST00000564492 PDE4CQ08493 712 aa10.73□□□□□ -0.69
LINC00261-202ENST00000564492 ZMYND15Q9H091 742 aa10.73□□□□□ -0.69
LINC00261-202ENST00000564492 LAS1LQ9Y4W2 734 aaKnown RBP10.72□□□□□ -0.69
LINC00261-202ENST00000564492 WRNQ14191 1432 aaPredicted RBP eCLIP10.72□□□□□ -0.69
LINC00261-202ENST00000564492 PPM1GO15355 546 aaPredicted RBP10.72□□□□□ -0.69
LINC00261-202ENST00000564492 ZNF326Q5BKZ1 582 aaKnown RBP10.7□□□□□ -0.7
LINC00261-202ENST00000564492 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
LINC00261-202ENST00000564492 NPM1P06748 294 aaKnown RBP eCLIP10.66□□□□□ -0.7
LINC00261-202ENST00000564492 PLPPR3Q6T4P5 718 aa10.66□□□□□ -0.7
LINC00261-202ENST00000564492 CHIC2Q9UKJ5 165 aa10.66□□□□□ -0.7
LINC00261-202ENST00000564492 PDS5BQ9NTI5 1447 aa10.65□□□□□ -0.7
LINC00261-202ENST00000564492 PPP4R2Q9NY27 417 aa10.65□□□□□ -0.7
LINC00261-202ENST00000564492 KCNH8Q96L42 1107 aa10.64□□□□□ -0.71
LINC00261-202ENST00000564492 SLC4A1APQ9BWU0 796 aaKnown RBP10.64□□□□□ -0.71
LINC00261-202ENST00000564492 IPO9Q96P70 1041 aaKnown RBP10.64□□□□□ -0.71
LINC00261-202ENST00000564492 HNRNPUQ00839 825 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC00261-202ENST00000564492 CCDC88BA6NC98 1476 aa10.63□□□□□ -0.71
LINC00261-202ENST00000564492 AEBP2Q6ZN18 517 aaPredicted RBP10.62□□□□□ -0.71
LINC00261-202ENST00000564492 SMARCA4P51532 1647 aa10.62□□□□□ -0.71
LINC00261-202ENST00000564492 USP35Q9P2H5 1018 aa10.62□□□□□ -0.71
LINC00261-202ENST00000564492 DDX10Q13206 875 aaKnown RBP10.61□□□□□ -0.71
LINC00261-202ENST00000564492 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
LINC00261-202ENST00000564492 BRPF3Q9ULD4 1205 aa10.6□□□□□ -0.71
LINC00261-202ENST00000564492 SOGA1O94964 1423 aa10.6□□□□□ -0.71
LINC00261-202ENST00000564492 TDRD9Q8NDG6 1382 aaKnown RBP10.59□□□□□ -0.71
LINC00261-202ENST00000564492 TNNT2P45379 298 aaPredicted RBP10.59□□□□□ -0.71
LINC00261-202ENST00000564492 CLIP1P30622 1438 aa10.58□□□□□ -0.72
LINC00261-202ENST00000564492 NCLP19338 710 aaKnown RBP10.58□□□□□ -0.72
LINC00261-202ENST00000564492 PDIA4P13667 645 aaKnown RBP10.58□□□□□ -0.72
LINC00261-202ENST00000564492 PNNQ9H307 717 aaKnown RBP10.58□□□□□ -0.72
LINC00261-202ENST00000564492 CC2D2AQ9P2K1 1620 aa10.58□□□□□ -0.72
LINC00261-202ENST00000564492 ARXQ96QS3 562 aa10.58□□□□□ -0.72
LINC00261-202ENST00000564492 WIZO95785 1651 aa10.57□□□□□ -0.72
LINC00261-202ENST00000564492 BICRAQ9NZM4 1560 aa10.57□□□□□ -0.72
LINC00261-202ENST00000564492 GSE1Q14687 1217 aa10.57□□□□□ -0.72
LINC00261-202ENST00000564492 B4GALNT3Q6L9W6 998 aa10.57□□□□□ -0.72
LINC00261-202ENST00000564492 KIF27Q86VH2 1401 aa10.57□□□□□ -0.72
LINC00261-202ENST00000564492 ARID4BQ4LE39 1312 aaPredicted RBP10.56□□□□□ -0.72
LINC00261-202ENST00000564492 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
LINC00261-202ENST00000564492 DDRGK1Q96HY6 314 aa10.55□□□□□ -0.72
LINC00261-202ENST00000564492 PAK3O75914 559 aaPredicted RBP10.55□□□□□ -0.72
LINC00261-202ENST00000564492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.55□□□□□ -0.722e-7■□□□□ 10.4
LINC00261-202ENST00000564492 ABCC8Q09428 1581 aa10.55□□□□□ -0.72
LINC00261-202ENST00000564492 MTUS2Q5JR59 1369 aa10.54□□□□□ -0.72
LINC00261-202ENST00000564492 RBM10P98175 930 aaKnown RBP10.54□□□□□ -0.72
LINC00261-202ENST00000564492 CUX2O14529 1486 aa10.53□□□□□ -0.72
LINC00261-202ENST00000564492 DNAJC5BQ9UF47 199 aa10.52□□□□□ -0.73
LINC00261-202ENST00000564492 TOP2AP11388 1531 aaKnown RBP10.52□□□□□ -0.73
LINC00261-202ENST00000564492 CDK11BP21127 795 aaKnown RBP10.52□□□□□ -0.73
LINC00261-202ENST00000564492 SENP3Q9H4L4 574 aaPredicted RBP10.52□□□□□ -0.73
LINC00261-202ENST00000564492 CHGAP10645 457 aaKnown RBP10.52□□□□□ -0.73
LINC00261-202ENST00000564492 FAM43AQ8N2R8 423 aa10.52□□□□□ -0.73
LINC00261-202ENST00000564492 CADPSQ9ULU8 1353 aa10.51□□□□□ -0.73
LINC00261-202ENST00000564492 RRP9O43818 475 aaKnown RBP10.51□□□□□ -0.73
LINC00261-202ENST00000564492 CEP162Q5TB80 1403 aa10.5□□□□□ -0.73
LINC00261-202ENST00000564492 CARMIL1Q5VZK9 1371 aa10.5□□□□□ -0.73
LINC00261-202ENST00000564492 PLEKHD1A6NEE1 506 aa10.5□□□□□ -0.73
LINC00261-202ENST00000564492 RRP7BPQ9NSQ0 103 aa10.49□□□□□ -0.73
LINC00261-202ENST00000564492 HMGXB3Q12766 1538 aa10.48□□□□□ -0.73
LINC00261-202ENST00000564492 TSPY4P0CV99 314 aa10.48□□□□□ -0.73
LINC00261-202ENST00000564492 TSPY10P0CW01 314 aa10.48□□□□□ -0.73
LINC00261-202ENST00000564492 UNC13AQ9UPW8 1703 aa10.48□□□□□ -0.73
LINC00261-202ENST00000564492 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
LINC00261-202ENST00000564492 L1TD1Q5T7N2 865 aaKnown RBP10.47□□□□□ -0.73
LINC00261-202ENST00000564492 ESF1Q9H501 851 aaKnown RBP10.47□□□□□ -0.73
LINC00261-202ENST00000564492 GOLGA3Q08378 1498 aa10.47□□□□□ -0.73
LINC00261-202ENST00000564492 TRIM44Q96DX7 344 aaPredicted RBP10.46□□□□□ -0.73
LINC00261-202ENST00000564492 CEP164Q9UPV0 1460 aa10.46□□□□□ -0.74
LINC00261-202ENST00000564492 EEA1Q15075 1411 aa10.46□□□□□ -0.74
LINC00261-202ENST00000564492 BCL11BQ9C0K0 894 aaPredicted RBP10.45□□□□□ -0.74
LINC00261-202ENST00000564492 FGD1P98174 961 aa10.45□□□□□ -0.74
LINC00261-202ENST00000564492 CANXP27824 592 aaKnown RBP10.44□□□□□ -0.74
LINC00261-202ENST00000564492 ANP32BQ92688 251 aaKnown RBP10.42□□□□□ -0.74
LINC00261-202ENST00000564492 TNIKQ9UKE5 1360 aa10.42□□□□□ -0.74
LINC00261-202ENST00000564492 CFDP1Q9UEE9 299 aaPredicted RBP10.41□□□□□ -0.74
LINC00261-202ENST00000564492 TAF7LQ5H9L4 462 aa10.41□□□□□ -0.74
LINC00261-202ENST00000564492 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
LINC00261-202ENST00000564492 CCER2I3L3R5 266 aa10.4□□□□□ -0.74
LINC00261-202ENST00000564492 FRAT1Q92837 279 aaPredicted RBP10.4□□□□□ -0.74
LINC00261-202ENST00000564492 KDM2AQ9Y2K7 1162 aa10.4□□□□□ -0.74
LINC00261-202ENST00000564492 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
LINC00261-202ENST00000564492 HIRIP3Q9BW71 556 aaPredicted RBP10.39□□□□□ -0.75
LINC00261-202ENST00000564492 FAM9BQ8IZU0 186 aa10.39□□□□□ -0.75
LINC00261-202ENST00000564492 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
LINC00261-202ENST00000564492 AAMPQ13685 434 aa10.37□□□□□ -0.75
LINC00261-202ENST00000564492 RUSC2Q8N2Y8 1516 aa10.37□□□□□ -0.75
LINC00261-202ENST00000564492 FANCD2Q9BXW9 1451 aa10.37□□□□□ -0.75
LINC00261-202ENST00000564492 ARID3AQ99856 593 aa10.36□□□□□ -0.75
LINC00261-202ENST00000564492 KANK4Q5T7N3 995 aaPredicted RBP10.36□□□□□ -0.75
LINC00261-202ENST00000564492 BBXQ8WY36 941 aaPredicted RBP10.36□□□□□ -0.75
LINC00261-202ENST00000564492 RGL3Q3MIN7 710 aa10.35□□□□□ -0.75
LINC00261-202ENST00000564492 TONSLQ96HA7 1378 aa10.33□□□□□ -0.76
LINC00261-202ENST00000564492 NFKBIBQ15653 356 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms