RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 ZEB1P37275 1124 aaPredicted RBP11.86□□□□□ -0.51
CFDP1-202ENST00000562602 MROH2BQ7Z745 1585 aa11.85□□□□□ -0.51
CFDP1-202ENST00000562602 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
CFDP1-202ENST00000562602 CECR2Q9BXF3 1484 aa11.84□□□□□ -0.51
CFDP1-202ENST00000562602 MNX1P50219 401 aaPredicted RBP11.82□□□□□ -0.52
CFDP1-202ENST00000562602 TOP2AP11388 1531 aaKnown RBP11.74□□□□□ -0.53
CFDP1-202ENST00000562602 WIZO95785 1651 aa11.74□□□□□ -0.53
CFDP1-202ENST00000562602 POTEIP0CG38 1075 aa11.72□□□□□ -0.53
CFDP1-202ENST00000562602 ZRANB1Q9UGI0 708 aa11.7□□□□□ -0.54
CFDP1-202ENST00000562602 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
CFDP1-202ENST00000562602 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
CFDP1-202ENST00000562602 EEA1Q15075 1411 aa11.67□□□□□ -0.54
CFDP1-202ENST00000562602 EIF4G1Q04637 1599 aaKnown RBP11.65□□□□□ -0.54
CFDP1-202ENST00000562602 FAM9AQ8IZU1 332 aaPredicted RBP11.64□□□□□ -0.55
CFDP1-202ENST00000562602 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
CFDP1-202ENST00000562602 CLCN6P51797 869 aa11.63□□□□□ -0.55
CFDP1-202ENST00000562602 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
CFDP1-202ENST00000562602 FKBP8Q14318 412 aa11.62□□□□□ -0.55
CFDP1-202ENST00000562602 PPARGC1BQ86YN6 1023 aaKnown RBP11.62□□□□□ -0.55
CFDP1-202ENST00000562602 CCDC88BA6NC98 1476 aa11.61□□□□□ -0.55
CFDP1-202ENST00000562602 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
CFDP1-202ENST00000562602 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
CFDP1-202ENST00000562602 PHF12Q96QT6 1004 aa11.59□□□□□ -0.55
CFDP1-202ENST00000562602 SMARCA2P51531 1590 aa11.58□□□□□ -0.55
CFDP1-202ENST00000562602 PEG3Q9GZU2 1588 aa11.58□□□□□ -0.56
CFDP1-202ENST00000562602 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
CFDP1-202ENST00000562602 MIER1Q8N108 512 aa11.54□□□□□ -0.56
CFDP1-202ENST00000562602 TNIKQ9UKE5 1360 aa11.53□□□□□ -0.56
CFDP1-202ENST00000562602 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
CFDP1-202ENST00000562602 LHX8Q68G74 356 aa11.5□□□□□ -0.57
CFDP1-202ENST00000562602 DCBLD2Q96PD2 775 aa11.49□□□□□ -0.57
CFDP1-202ENST00000562602 TSPYL2Q9H2G4 693 aaPredicted RBP11.47□□□□□ -0.57
CFDP1-202ENST00000562602 CCDC61Q9Y6R9 512 aa11.47□□□□□ -0.57
CFDP1-202ENST00000562602 RASEFQ8IZ41 740 aa11.46□□□□□ -0.57
CFDP1-202ENST00000562602 GOLGA3Q08378 1498 aa11.44□□□□□ -0.58
CFDP1-202ENST00000562602 CEP162Q5TB80 1403 aa11.43□□□□□ -0.58
CFDP1-202ENST00000562602 ABCC8Q09428 1581 aa11.43□□□□□ -0.58
CFDP1-202ENST00000562602 MS4A3Q96HJ5 214 aa11.43□□□□□ -0.58
CFDP1-202ENST00000562602 ATAD2BQ9ULI0 1458 aa11.42□□□□□ -0.58
CFDP1-202ENST00000562602 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
CFDP1-202ENST00000562602 PLCD3Q8N3E9 789 aa11.41□□□□□ -0.58
CFDP1-202ENST00000562602 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
CFDP1-202ENST00000562602 CEP164Q9UPV0 1460 aa11.39□□□□□ -0.59
CFDP1-202ENST00000562602 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
CFDP1-202ENST00000562602 SOGA1O94964 1423 aa11.39□□□□□ -0.59
CFDP1-202ENST00000562602 NUBP1P53384 320 aa11.39□□□□□ -0.59
CFDP1-202ENST00000562602 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
CFDP1-202ENST00000562602 UBTFP17480 764 aaKnown RBP11.37□□□□□ -0.59
CFDP1-202ENST00000562602 KIF21BO75037 1637 aa11.35□□□□□ -0.59
CFDP1-202ENST00000562602 CCER1Q8TC90 406 aaPredicted RBP11.35□□□□□ -0.59
CFDP1-202ENST00000562602 CC2D2AQ9P2K1 1620 aa11.35□□□□□ -0.59
CFDP1-202ENST00000562602 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
CFDP1-202ENST00000562602 ASTLQ6HA08 431 aaPredicted RBP11.34□□□□□ -0.59
CFDP1-202ENST00000562602 MAP3K13O43283 966 aa11.33□□□□□ -0.6
CFDP1-202ENST00000562602 ATMINO43313 823 aaPredicted RBP11.33□□□□□ -0.6
CFDP1-202ENST00000562602 TRPC6Q9Y210 931 aa11.33□□□□□ -0.6
CFDP1-202ENST00000562602 ZBTB47Q9UFB7 747 aaPredicted RBP11.28□□□□□ -0.6
CFDP1-202ENST00000562602 FBXO3Q9UK99 471 aa11.28□□□□□ -0.6
CFDP1-202ENST00000562602 HMGXB3Q12766 1538 aa11.28□□□□□ -0.6
CFDP1-202ENST00000562602 NCAPD3P42695 1498 aa11.27□□□□□ -0.6
CFDP1-202ENST00000562602 SYNJ1O43426 1573 aa11.26□□□□□ -0.61
CFDP1-202ENST00000562602 ATN1P54259 1190 aaPredicted RBP11.26□□□□□ -0.61
CFDP1-202ENST00000562602 CLIP1P30622 1438 aa11.26□□□□□ -0.61
CFDP1-202ENST00000562602 RUSC2Q8N2Y8 1516 aa11.25□□□□□ -0.61
CFDP1-202ENST00000562602 TOP2BQ02880 1626 aa11.25□□□□□ -0.61
CFDP1-202ENST00000562602 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
CFDP1-202ENST00000562602 VPS8Q8N3P4 1428 aa11.24□□□□□ -0.61
CFDP1-202ENST00000562602 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
CFDP1-202ENST00000562602 ERICH3Q5RHP9 1530 aa11.22□□□□□ -0.61
CFDP1-202ENST00000562602 POTEJP0CG39 1038 aa11.21□□□□□ -0.61
CFDP1-202ENST00000562602 VASPP50552 380 aaPredicted RBP11.21□□□□□ -0.61
CFDP1-202ENST00000562602 BIVM-ERCC5R4GMW8 1640 aa11.2□□□□□ -0.62
CFDP1-202ENST00000562602 METRNQ9UJH8 293 aa11.2□□□□□ -0.62
CFDP1-202ENST00000562602 SGIP1Q9BQI5 828 aa11.19□□□□□ -0.62
CFDP1-202ENST00000562602 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
CFDP1-202ENST00000562602 C7P10643 843 aa11.18□□□□□ -0.62
CFDP1-202ENST00000562602 TIE1P35590 1138 aa11.18□□□□□ -0.62
CFDP1-202ENST00000562602 SLC39A7Q92504 469 aa11.18□□□□□ -0.62
CFDP1-202ENST00000562602 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
CFDP1-202ENST00000562602 PCDHB13Q9Y5F0 798 aa11.17□□□□□ -0.62
CFDP1-202ENST00000562602 CLSPNQ9HAW4 1339 aa11.16□□□□□ -0.62
CFDP1-202ENST00000562602 IFNL1Q8IU54 200 aa11.16□□□□□ -0.62
CFDP1-202ENST00000562602 PRXQ9BXM0 1461 aa11.16□□□□□ -0.62
CFDP1-202ENST00000562602 KIF27Q86VH2 1401 aa11.16□□□□□ -0.62
CFDP1-202ENST00000562602 TTLL13PA6NNM8 815 aa11.15□□□□□ -0.62
CFDP1-202ENST00000562602 CFTRP13569 1480 aa11.14□□□□□ -0.63
CFDP1-202ENST00000562602 RAPGEF2Q9Y4G8 1499 aa11.14□□□□□ -0.63
CFDP1-202ENST00000562602 CENPBP07199 599 aaPredicted RBP11.14□□□□□ -0.63
CFDP1-202ENST00000562602 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
CFDP1-202ENST00000562602 DIEXFQ68CQ4 756 aaKnown RBP11.13□□□□□ -0.63
CFDP1-202ENST00000562602 ZNF316A6NFI3 1004 aaPredicted RBP11.11□□□□□ -0.63
CFDP1-202ENST00000562602 PYGBP11216 843 aa11.1□□□□□ -0.63
CFDP1-202ENST00000562602 TTBK1Q5TCY1 1321 aaPredicted RBP11.09□□□□□ -0.63
CFDP1-202ENST00000562602 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
CFDP1-202ENST00000562602 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
CFDP1-202ENST00000562602 COLQQ9Y215 455 aaPredicted RBP11.08□□□□□ -0.64
CFDP1-202ENST00000562602 CUX1P39880 1505 aa11.06□□□□□ -0.64
CFDP1-202ENST00000562602 TRIM35Q9UPQ4 493 aa11.06□□□□□ -0.64
CFDP1-202ENST00000562602 ACIN1Q9UKV3 1341 aaKnown RBP11.06□□□□□ -0.64
CFDP1-202ENST00000562602 PCDHB8Q9UN66 801 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms