RNA–Protein interactions for RNA: ENST00000562430.5

RBBP6-205, Transcript of RB binding protein 6, ubiquitin ligase, humanhuman

TSL 1 (best)

Gene RBBP6, Length 6,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP6-205ENST00000562430 GOLGA6L22H0YM25 854 aa7.5□□□□□ -1.21
RBBP6-205ENST00000562430 PTMSP20962 102 aa7.49□□□□□ -1.21
RBBP6-205ENST00000562430 MYH16Q9H6N6 1097 aa7.48□□□□□ -1.21
RBBP6-205ENST00000562430 MRS2Q9HD23 443 aa7.48□□□□□ -1.21
RBBP6-205ENST00000562430 PPP4R2Q9NY27 417 aa7.48□□□□□ -1.21
RBBP6-205ENST00000562430 BAZ1BQ9UIG0 1483 aaKnown RBP7.48□□□□□ -1.21
RBBP6-205ENST00000562430 DDX10Q13206 875 aaKnown RBP7.47□□□□□ -1.21
RBBP6-205ENST00000562430 NCLP19338 710 aaKnown RBP7.45□□□□□ -1.22
RBBP6-205ENST00000562430 CFAP53Q96M91 514 aa7.45□□□□□ -1.22
RBBP6-205ENST00000562430 PNNQ9H307 717 aaKnown RBP7.45□□□□□ -1.22
RBBP6-205ENST00000562430 SCAF1Q9H7N4 1312 aaKnown RBP7.45□□□□□ -1.22
RBBP6-205ENST00000562430 VPS8Q8N3P4 1428 aa7.44□□□□□ -1.22
RBBP6-205ENST00000562430 TNNT2P45379 298 aaPredicted RBP7.44□□□□□ -1.22
RBBP6-205ENST00000562430 CCNB3Q8WWL7 1395 aa7.43□□□□□ -1.22
RBBP6-205ENST00000562430 NPM1P06748 294 aaKnown RBP eCLIP7.43□□□□□ -1.22
RBBP6-205ENST00000562430 HAP1P54257 671 aaPredicted RBP7.43□□□□□ -1.22
RBBP6-205ENST00000562430 TRIM44Q96DX7 344 aaPredicted RBP7.43□□□□□ -1.22
RBBP6-205ENST00000562430 SMARCA2P51531 1590 aa7.42□□□□□ -1.22
RBBP6-205ENST00000562430 CNGB1Q14028 1251 aaPredicted RBP7.42□□□□□ -1.22
RBBP6-205ENST00000562430 CASC1Q6TDU7 716 aa7.42□□□□□ -1.22
RBBP6-205ENST00000562430 MIER1Q8N108 512 aa7.42□□□□□ -1.22
RBBP6-205ENST00000562430 NPM2Q86SE8 214 aaKnown RBP7.41□□□□□ -1.22
RBBP6-205ENST00000562430 FAM9BQ8IZU0 186 aa7.41□□□□□ -1.22
RBBP6-205ENST00000562430 ESF1Q9H501 851 aaKnown RBP7.41□□□□□ -1.22
RBBP6-205ENST00000562430 L1TD1Q5T7N2 865 aaKnown RBP7.41□□□□□ -1.22
RBBP6-205ENST00000562430 ZNF777Q9ULD5 760 aaPredicted RBP7.4□□□□□ -1.23
RBBP6-205ENST00000562430 ROCK2O75116 1388 aaKnown RBP7.39□□□□□ -1.23
RBBP6-205ENST00000562430 PHLDB1Q86UU1 1377 aa7.39□□□□□ -1.23
RBBP6-205ENST00000562430 SETD5Q9C0A6 1442 aa7.39□□□□□ -1.23
RBBP6-205ENST00000562430 PLEKHD1A6NEE1 506 aa7.38□□□□□ -1.23
RBBP6-205ENST00000562430 P3H3Q8IVL6 736 aa7.38□□□□□ -1.23
RBBP6-205ENST00000562430 FMN1Q68DA7 1419 aa7.38□□□□□ -1.23
RBBP6-205ENST00000562430 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
RBBP6-205ENST00000562430 ARHGAP35Q9NRY4 1499 aa7.37□□□□□ -1.23
RBBP6-205ENST00000562430 TOP2AP11388 1531 aaKnown RBP7.37□□□□□ -1.23
RBBP6-205ENST00000562430 FBLN2P98095 1184 aa7.36□□□□□ -1.23
RBBP6-205ENST00000562430 NUDCQ9Y266 331 aa7.36□□□□□ -1.23
RBBP6-205ENST00000562430 NOP58Q9Y2X3 529 aaKnown RBP7.36□□□□□ -1.23
RBBP6-205ENST00000562430 GOLGA6L6A8MZA4 724 aa7.36□□□□□ -1.23
RBBP6-205ENST00000562430 NRDCO43847 1150 aa7.35□□□□□ -1.23
RBBP6-205ENST00000562430 KNSTRNQ9Y448 316 aa7.35□□□□□ -1.23
RBBP6-205ENST00000562430 PDE3BQ13370 1112 aa7.35□□□□□ -1.23
RBBP6-205ENST00000562430 STAG3Q9UJ98 1225 aa7.35□□□□□ -1.23
RBBP6-205ENST00000562430 RALBP1Q15311 655 aa7.34□□□□□ -1.23
RBBP6-205ENST00000562430 NGEFQ8N5V2 710 aa7.34□□□□□ -1.23
RBBP6-205ENST00000562430 TCERG1O14776 1098 aaKnown RBP7.33□□□□□ -1.24
RBBP6-205ENST00000562430 KANK1Q14678 1352 aa7.33□□□□□ -1.24
RBBP6-205ENST00000562430 USP35Q9P2H5 1018 aa7.33□□□□□ -1.24
RBBP6-205ENST00000562430 RSPH4AQ5TD94 716 aa7.32□□□□□ -1.24
RBBP6-205ENST00000562430 CHMP7Q8WUX9 453 aaPredicted RBP7.32□□□□□ -1.24
RBBP6-205ENST00000562430 CALD1Q05682 793 aaKnown RBP7.32□□□□□ -1.24
RBBP6-205ENST00000562430 CARMIL1Q5VZK9 1371 aa7.31□□□□□ -1.24
RBBP6-205ENST00000562430 CFDP1Q9UEE9 299 aaPredicted RBP7.31□□□□□ -1.24
RBBP6-205ENST00000562430 TMF1P82094 1093 aa7.31□□□□□ -1.24
RBBP6-205ENST00000562430 SUPT16HQ9Y5B9 1047 aaKnown RBP7.31□□□□□ -1.24
RBBP6-205ENST00000562430 ABCC8Q09428 1581 aa7.3□□□□□ -1.24
RBBP6-205ENST00000562430 CARD11Q9BXL7 1154 aa7.3□□□□□ -1.24
RBBP6-205ENST00000562430 ZRSR1Q15695 479 aaKnown RBP7.3□□□□□ -1.24
RBBP6-205ENST00000562430 CDK11BP21127 795 aaKnown RBP7.3□□□□□ -1.24
RBBP6-205ENST00000562430 EIF3AQ14152 1382 aaKnown RBP7.29□□□□□ -1.24
RBBP6-205ENST00000562430 MAPK8IP3Q9UPT6 1336 aa7.29□□□□□ -1.24
RBBP6-205ENST00000562430 KTN1Q86UP2 1357 aaKnown RBP7.29□□□□□ -1.24
RBBP6-205ENST00000562430 CARMIL2Q6F5E8 1435 aa7.29□□□□□ -1.24
RBBP6-205ENST00000562430 HDGFP51858 240 aaKnown RBP7.28□□□□□ -1.24
RBBP6-205ENST00000562430 FTSJ3Q8IY81 847 aaKnown RBP7.28□□□□□ -1.24
RBBP6-205ENST00000562430 MCCP23508 829 aa7.28□□□□□ -1.24
RBBP6-205ENST00000562430 AAMPQ13685 434 aa7.28□□□□□ -1.24
RBBP6-205ENST00000562430 NBR1Q14596 966 aa7.28□□□□□ -1.24
RBBP6-205ENST00000562430 STAC3Q96MF2 364 aa7.28□□□□□ -1.24
RBBP6-205ENST00000562430 HDAC5Q9UQL6 1122 aa7.28□□□□□ -1.24
RBBP6-205ENST00000562430 CHAF1AQ13111 956 aaPredicted RBP7.28□□□□□ -1.24
RBBP6-205ENST00000562430 CHIC2Q9UKJ5 165 aa7.28□□□□□ -1.24
RBBP6-205ENST00000562430 IPO8O15397 1037 aaKnown RBP7.27□□□□□ -1.25
RBBP6-205ENST00000562430 HSCBQ8IWL3 235 aa7.27□□□□□ -1.25
RBBP6-205ENST00000562430 PTMAP06454 111 aaKnown RBP7.26□□□□□ -1.25
RBBP6-205ENST00000562430 CHGAP10645 457 aaKnown RBP7.26□□□□□ -1.25
RBBP6-205ENST00000562430 GBP4Q96PP9 640 aa7.26□□□□□ -1.25
RBBP6-205ENST00000562430 CUX2O14529 1486 aa7.26□□□□□ -1.25
RBBP6-205ENST00000562430 CCDC88BA6NC98 1476 aa7.26□□□□□ -1.25
RBBP6-205ENST00000562430 ANKRD30AQ9BXX3 1397 aa7.26□□□□□ -1.25
RBBP6-205ENST00000562430 HTATSF1O43719 755 aaKnown RBP7.25□□□□□ -1.25
RBBP6-205ENST00000562430 CHMP4CQ96CF2 233 aa7.25□□□□□ -1.25
RBBP6-205ENST00000562430 PMFBP1Q8TBY8 1022 aa7.25□□□□□ -1.25
RBBP6-205ENST00000562430 RRP7BPQ9NSQ0 103 aa7.25□□□□□ -1.25
RBBP6-205ENST00000562430 PDS5BQ9NTI5 1447 aa7.25□□□□□ -1.25
RBBP6-205ENST00000562430 SYAP1Q96A49 352 aaPredicted RBP7.25□□□□□ -1.25
RBBP6-205ENST00000562430 CCDC18Q5T9S5 1454 aa7.25□□□□□ -1.25
RBBP6-205ENST00000562430 RAPGEF2Q9Y4G8 1499 aa7.24□□□□□ -1.25
RBBP6-205ENST00000562430 CSPP1Q1MSJ5 1256 aa7.23□□□□□ -1.25
RBBP6-205ENST00000562430 UACAQ9BZF9 1416 aa7.23□□□□□ -1.25
RBBP6-205ENST00000562430 HSP90AB1P08238 724 aaKnown RBP7.23□□□□□ -1.25
RBBP6-205ENST00000562430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.23□□□□□ -1.259e-7■■□□□ 14.4
RBBP6-205ENST00000562430 RWDD1Q9H446 243 aaPredicted RBP7.23□□□□□ -1.25
RBBP6-205ENST00000562430 KDM2AQ9Y2K7 1162 aa7.22□□□□□ -1.25
RBBP6-205ENST00000562430 CUX1P39880 1505 aa7.22□□□□□ -1.25
RBBP6-205ENST00000562430 MROH2BQ7Z745 1585 aa7.22□□□□□ -1.25
RBBP6-205ENST00000562430 MSNP26038 577 aaKnown RBP7.21□□□□□ -1.25
RBBP6-205ENST00000562430 PPP1R15AO75807 674 aaPredicted RBP7.21□□□□□ -1.26
RBBP6-205ENST00000562430 KIF15Q9NS87 1388 aa7.21□□□□□ -1.26
RBBP6-205ENST00000562430 FANCIQ9NVI1 1328 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms