RNA–Protein interactions for RNA: ENST00000562409.1

AC009090.1-201, humanhuman

TSL 3 BASIC

Gene AC009090.1, Length 358 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.1-201ENST00000562409 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
AC009090.1-201ENST00000562409 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
AC009090.1-201ENST00000562409 POTEIP0CG38 1075 aa15.14■□□□□ 0.01
AC009090.1-201ENST00000562409 VASPP50552 380 aaPredicted RBP15.14■□□□□ 0.01
AC009090.1-201ENST00000562409 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
AC009090.1-201ENST00000562409 MIER1Q8N108 512 aa15.08■□□□□ 0
AC009090.1-201ENST00000562409 PLCD3Q8N3E9 789 aa15.08■□□□□ 0
AC009090.1-201ENST00000562409 HMGXB3Q12766 1538 aa15.07■□□□□ 0
AC009090.1-201ENST00000562409 BAZ1BQ9UIG0 1483 aaKnown RBP15.07■□□□□ 0
AC009090.1-201ENST00000562409 ERCC6Q03468 1493 aa15.04■□□□□ -0
AC009090.1-201ENST00000562409 MROH2BQ7Z745 1585 aa15.02■□□□□ -0
AC009090.1-201ENST00000562409 PLEKHG5O94827 1062 aa15.02■□□□□ -0
AC009090.1-201ENST00000562409 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
AC009090.1-201ENST00000562409 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
AC009090.1-201ENST00000562409 KLHL34Q8N239 644 aa14.95□□□□□ -0.02
AC009090.1-201ENST00000562409 NESP48681 1621 aa14.95□□□□□ -0.02
AC009090.1-201ENST00000562409 CREBZFQ9NS37 354 aa14.94□□□□□ -0.02
AC009090.1-201ENST00000562409 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
AC009090.1-201ENST00000562409 IFNLR1Q8IU57 520 aaPredicted RBP14.93□□□□□ -0.02
AC009090.1-201ENST00000562409 PLSCR2Q9NRY7 297 aa14.93□□□□□ -0.02
AC009090.1-201ENST00000562409 CUX2O14529 1486 aa14.93□□□□□ -0.02
AC009090.1-201ENST00000562409 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
AC009090.1-201ENST00000562409 ZBTB47Q9UFB7 747 aaPredicted RBP14.87□□□□□ -0.03
AC009090.1-201ENST00000562409 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
AC009090.1-201ENST00000562409 WIZO95785 1651 aa14.84□□□□□ -0.03
AC009090.1-201ENST00000562409 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.04
AC009090.1-201ENST00000562409 CADPSQ9ULU8 1353 aa14.81□□□□□ -0.04
AC009090.1-201ENST00000562409 DCBLD2Q96PD2 775 aa14.8□□□□□ -0.04
AC009090.1-201ENST00000562409 RSF1Q96T23 1441 aaPredicted RBP14.78□□□□□ -0.04
AC009090.1-201ENST00000562409 MNX1P50219 401 aaPredicted RBP14.76□□□□□ -0.05
AC009090.1-201ENST00000562409 SPOCK2Q92563 424 aa14.76□□□□□ -0.05
AC009090.1-201ENST00000562409 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
AC009090.1-201ENST00000562409 ZRANB1Q9UGI0 708 aa14.72□□□□□ -0.05
AC009090.1-201ENST00000562409 THOC2Q8NI27 1593 aaKnown RBP14.7□□□□□ -0.06
AC009090.1-201ENST00000562409 ZNF579Q8NAF0 562 aaKnown RBP14.7□□□□□ -0.06
AC009090.1-201ENST00000562409 KIF21AQ7Z4S6 1674 aa14.69□□□□□ -0.06
AC009090.1-201ENST00000562409 GALR2O43603 387 aaPredicted RBP14.69□□□□□ -0.06
AC009090.1-201ENST00000562409 CLCN6P51797 869 aa14.67□□□□□ -0.06
AC009090.1-201ENST00000562409 OTUD5Q96G74 571 aa14.66□□□□□ -0.06
AC009090.1-201ENST00000562409 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
AC009090.1-201ENST00000562409 POTEB2H3BUK9 544 aa14.65□□□□□ -0.06
AC009090.1-201ENST00000562409 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
AC009090.1-201ENST00000562409 NUBP1P53384 320 aa14.62□□□□□ -0.07
AC009090.1-201ENST00000562409 AMER1Q5JTC6 1135 aaPredicted RBP14.62□□□□□ -0.07
AC009090.1-201ENST00000562409 CFTRP13569 1480 aa14.62□□□□□ -0.07
AC009090.1-201ENST00000562409 CEP164Q9UPV0 1460 aa14.62□□□□□ -0.07
AC009090.1-201ENST00000562409 FANCD2Q9BXW9 1451 aa14.61□□□□□ -0.07
AC009090.1-201ENST00000562409 RTN4Q9NQC3 1192 aaKnown RBP14.58□□□□□ -0.08
AC009090.1-201ENST00000562409 CIZ1Q9ULV3 898 aaPredicted RBP14.58□□□□□ -0.08
AC009090.1-201ENST00000562409 DCAF8Q5TAQ9 597 aa14.57□□□□□ -0.08
AC009090.1-201ENST00000562409 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
AC009090.1-201ENST00000562409 WDR62O43379 1518 aa14.56□□□□□ -0.08
AC009090.1-201ENST00000562409 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
AC009090.1-201ENST00000562409 PHF12Q96QT6 1004 aa14.54□□□□□ -0.08
AC009090.1-201ENST00000562409 CCDC88BA6NC98 1476 aa14.54□□□□□ -0.08
AC009090.1-201ENST00000562409 TSPYL2Q9H2G4 693 aaPredicted RBP14.53□□□□□ -0.08
AC009090.1-201ENST00000562409 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
AC009090.1-201ENST00000562409 GSE1Q14687 1217 aa14.51□□□□□ -0.09
AC009090.1-201ENST00000562409 PELP1Q8IZL8 1130 aaKnown RBP14.5□□□□□ -0.09
AC009090.1-201ENST00000562409 POTEMA6NI47 508 aa14.49□□□□□ -0.09
AC009090.1-201ENST00000562409 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.1
AC009090.1-201ENST00000562409 PKD2Q13563 968 aa14.43□□□□□ -0.1
AC009090.1-201ENST00000562409 POTEGQ6S5H5 508 aa14.43□□□□□ -0.1
AC009090.1-201ENST00000562409 ECM2O94769 699 aaPredicted RBP14.4□□□□□ -0.1
AC009090.1-201ENST00000562409 PRDM2Q13029 1718 aa14.37□□□□□ -0.11
AC009090.1-201ENST00000562409 ABCC8Q09428 1581 aa14.35□□□□□ -0.11
AC009090.1-201ENST00000562409 POTEJP0CG39 1038 aa14.35□□□□□ -0.11
AC009090.1-201ENST00000562409 PYGBP11216 843 aa14.35□□□□□ -0.11
AC009090.1-201ENST00000562409 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
AC009090.1-201ENST00000562409 CCDC61Q9Y6R9 512 aa14.35□□□□□ -0.11
AC009090.1-201ENST00000562409 IFT140Q96RY7 1462 aa14.33□□□□□ -0.12
AC009090.1-201ENST00000562409 TOPBP1Q92547 1522 aa14.33□□□□□ -0.12
AC009090.1-201ENST00000562409 SUPT5HO00267 1087 aaKnown RBP14.33□□□□□ -0.12
AC009090.1-201ENST00000562409 MS4A3Q96HJ5 214 aa14.29□□□□□ -0.12
AC009090.1-201ENST00000562409 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
AC009090.1-201ENST00000562409 DNMBPQ6XZF7 1577 aa14.27□□□□□ -0.12
AC009090.1-201ENST00000562409 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.12
AC009090.1-201ENST00000562409 ATMINO43313 823 aaPredicted RBP14.24□□□□□ -0.13
AC009090.1-201ENST00000562409 CHRM1P11229 460 aaPredicted RBP14.24□□□□□ -0.13
AC009090.1-201ENST00000562409 ASTLQ6HA08 431 aaPredicted RBP14.23□□□□□ -0.13
AC009090.1-201ENST00000562409 RGL2O15211 777 aa14.22□□□□□ -0.13
AC009090.1-201ENST00000562409 LCE2DQ5TA82 110 aaPredicted RBP14.22□□□□□ -0.13
AC009090.1-201ENST00000562409 KIF12Q96FN5 646 aa14.21□□□□□ -0.13
AC009090.1-201ENST00000562409 AQRO60306 1485 aaKnown RBP eCLIP14.2□□□□□ -0.14
AC009090.1-201ENST00000562409 MAP3K13O43283 966 aa14.2□□□□□ -0.14
AC009090.1-201ENST00000562409 PCDHB13Q9Y5F0 798 aa14.2□□□□□ -0.14
AC009090.1-201ENST00000562409 SOGA1O94964 1423 aa14.2□□□□□ -0.14
AC009090.1-201ENST00000562409 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
AC009090.1-201ENST00000562409 SLC39A7Q92504 469 aa14.17□□□□□ -0.14
AC009090.1-201ENST00000562409 RNF25Q96BH1 459 aaPredicted RBP14.17□□□□□ -0.14
AC009090.1-201ENST00000562409 RAD54L2Q9Y4B4 1467 aa14.16□□□□□ -0.14
AC009090.1-201ENST00000562409 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
AC009090.1-201ENST00000562409 EIF4G3O43432 1585 aaKnown RBP14.15□□□□□ -0.14
AC009090.1-201ENST00000562409 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
AC009090.1-201ENST00000562409 C7P10643 843 aa14.15□□□□□ -0.14
AC009090.1-201ENST00000562409 RIOK3O14730 519 aaKnown RBP14.14□□□□□ -0.15
AC009090.1-201ENST00000562409 ZNF467Q7Z7K2 595 aaPredicted RBP14.14□□□□□ -0.15
AC009090.1-201ENST00000562409 FAM163AQ96GL9 167 aaPredicted RBP14.14□□□□□ -0.15
AC009090.1-201ENST00000562409 PCDHB8Q9UN66 801 aa14.14□□□□□ -0.15
AC009090.1-201ENST00000562409 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms