RNA–Protein interactions for RNA: ENST00000561838.1

ITGAM-203, Transcript of integrin subunit alpha M, humanhuman

TSL 4

Gene ITGAM, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-203ENST00000561838 NPM1P06748 294 aaKnown RBP eCLIP23.23■■□□□ 1.31
ITGAM-203ENST00000561838 ABCC10Q5T3U5 1492 aa23.17■■□□□ 1.3
ITGAM-203ENST00000561838 MAPKBP1O60336 1514 aa23.15■■□□□ 1.3
ITGAM-203ENST00000561838 FAM69CQ0P6D2 419 aa23.15■■□□□ 1.3
ITGAM-203ENST00000561838 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
ITGAM-203ENST00000561838 KIAA0586Q9BVV6 1533 aa23.06■■□□□ 1.28
ITGAM-203ENST00000561838 DIP2BQ9P265 1576 aa23.05■■□□□ 1.28
ITGAM-203ENST00000561838 ADCY10Q96PN6 1610 aa23.02■■□□□ 1.28
ITGAM-203ENST00000561838 CUL7Q14999 1698 aa22.98■■□□□ 1.27
ITGAM-203ENST00000561838 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
ITGAM-203ENST00000561838 IGF1RP08069 1367 aa22.97■■□□□ 1.27
ITGAM-203ENST00000561838 KDM6BO15054 1643 aa22.97■■□□□ 1.27
ITGAM-203ENST00000561838 PTPRGP23470 1445 aa22.91■■□□□ 1.26
ITGAM-203ENST00000561838 CARMIL2Q6F5E8 1435 aa22.89■■□□□ 1.25
ITGAM-203ENST00000561838 TSPOAP1O95153 1857 aa22.86■■□□□ 1.25
ITGAM-203ENST00000561838 KDM4FA0A1W2PPD8 638 aa22.86■■□□□ 1.25
ITGAM-203ENST00000561838 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
ITGAM-203ENST00000561838 ABCC2Q92887 1545 aa22.83■■□□□ 1.25
ITGAM-203ENST00000561838 PLB1Q6P1J6 1458 aa22.83■■□□□ 1.25
ITGAM-203ENST00000561838 CARMIL1Q5VZK9 1371 aa22.82■■□□□ 1.24
ITGAM-203ENST00000561838 GLI2P10070 1586 aa22.8■■□□□ 1.24
ITGAM-203ENST00000561838 UHRF1BP1LA0JNW5 1464 aa22.78■■□□□ 1.24
ITGAM-203ENST00000561838 ASXL2Q76L83 1435 aa22.76■■□□□ 1.23
ITGAM-203ENST00000561838 IQGAP2Q13576 1575 aa22.75■■□□□ 1.23
ITGAM-203ENST00000561838 UACAQ9BZF9 1416 aa22.73■■□□□ 1.23
ITGAM-203ENST00000561838 TTBK1Q5TCY1 1321 aaPredicted RBP22.7■■□□□ 1.22
ITGAM-203ENST00000561838 PPRC1Q5VV67 1664 aaKnown RBP22.68■■□□□ 1.22
ITGAM-203ENST00000561838 KDM5BQ9UGL1 1544 aa22.66■■□□□ 1.22
ITGAM-203ENST00000561838 TEX14Q8IWB6 1497 aa22.66■■□□□ 1.22
ITGAM-203ENST00000561838 DISP1Q96F81 1524 aa22.63■■□□□ 1.21
ITGAM-203ENST00000561838 EPRSP07814 1512 aaKnown RBP22.62■■□□□ 1.21
ITGAM-203ENST00000561838 UGGT2Q9NYU1 1516 aa22.61■■□□□ 1.21
ITGAM-203ENST00000561838 MAP3K4Q9Y6R4 1608 aa22.6■■□□□ 1.21
ITGAM-203ENST00000561838 ADGRL1O94910 1474 aa22.6■■□□□ 1.21
ITGAM-203ENST00000561838 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
ITGAM-203ENST00000561838 ZCCHC11Q5TAX3 1644 aaKnown RBP22.54■■□□□ 1.2
ITGAM-203ENST00000561838 ILDR1Q86SU0 546 aaPredicted RBP22.54■■□□□ 1.2
ITGAM-203ENST00000561838 COL17A1Q9UMD9 1497 aaPredicted RBP22.54■■□□□ 1.2
ITGAM-203ENST00000561838 KIAA0556O60303 1618 aa22.52■■□□□ 1.2
ITGAM-203ENST00000561838 WDR7Q9Y4E6 1490 aa22.49■■□□□ 1.19
ITGAM-203ENST00000561838 GOLGA3Q08378 1498 aa22.46■■□□□ 1.19
ITGAM-203ENST00000561838 MAGI3Q5TCQ9 1506 aa22.44■■□□□ 1.18
ITGAM-203ENST00000561838 CFAP43Q8NDM7 1665 aa22.42■■□□□ 1.18
ITGAM-203ENST00000561838 CD109Q6YHK3 1445 aa22.41■■□□□ 1.18
ITGAM-203ENST00000561838 FAM9AQ8IZU1 332 aaPredicted RBP22.41■■□□□ 1.18
ITGAM-203ENST00000561838 HECW2Q9P2P5 1572 aa22.4■■□□□ 1.18
ITGAM-203ENST00000561838 CTTNBP2Q8WZ74 1663 aa22.38■■□□□ 1.17
ITGAM-203ENST00000561838 ABCA8O94911 1581 aa22.35■■□□□ 1.17
ITGAM-203ENST00000561838 KCNH8Q96L42 1107 aa22.33■■□□□ 1.17
ITGAM-203ENST00000561838 PHLDB1Q86UU1 1377 aa22.3■■□□□ 1.16
ITGAM-203ENST00000561838 ARAP3Q8WWN8 1544 aa22.28■■□□□ 1.16
ITGAM-203ENST00000561838 PRXQ9BXM0 1461 aa22.23■■□□□ 1.15
ITGAM-203ENST00000561838 KIF21BO75037 1637 aa22.18■■□□□ 1.14
ITGAM-203ENST00000561838 ATP10BO94823 1461 aa22.16■■□□□ 1.14
ITGAM-203ENST00000561838 ABCA9Q8IUA7 1624 aa22.15■■□□□ 1.14
ITGAM-203ENST00000561838 NEO1Q92859 1461 aa22.14■■□□□ 1.13
ITGAM-203ENST00000561838 FBXO41Q8TF61 875 aa22.12■■□□□ 1.13
ITGAM-203ENST00000561838 ADAMTSL3P82987 1691 aa22.1■■□□□ 1.13
ITGAM-203ENST00000561838 PTPRMP28827 1452 aa22.09■■□□□ 1.13
ITGAM-203ENST00000561838 P3H3Q8IVL6 736 aa22.06■■□□□ 1.12
ITGAM-203ENST00000561838 SAMD9Q5K651 1589 aa22.04■■□□□ 1.12
ITGAM-203ENST00000561838 ARID3CA6NKF2 412 aa22.04■■□□□ 1.12
ITGAM-203ENST00000561838 RAPGEF3O95398 923 aa22.04■■□□□ 1.12
ITGAM-203ENST00000561838 RAPGEF6Q8TEU7 1601 aa22.04■■□□□ 1.12
ITGAM-203ENST00000561838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.12
ITGAM-203ENST00000561838 HNRNPUL2Q1KMD3 747 aaKnown RBP22.02■■□□□ 1.12
ITGAM-203ENST00000561838 BCORL1Q5H9F3 1711 aa22■■□□□ 1.11
ITGAM-203ENST00000561838 CSRNP3Q8WYN3 585 aa22■■□□□ 1.11
ITGAM-203ENST00000561838 ARID4BQ4LE39 1312 aaPredicted RBP22■■□□□ 1.11
ITGAM-203ENST00000561838 PLEKHD1A6NEE1 506 aa21.96■■□□□ 1.11
ITGAM-203ENST00000561838 PCF11O94913 1555 aaKnown RBP21.95■■□□□ 1.11
ITGAM-203ENST00000561838 FRMPD1Q5SYB0 1578 aa21.95■■□□□ 1.1
ITGAM-203ENST00000561838 DENND4BO75064 1496 aaPredicted RBP21.94■■□□□ 1.1
ITGAM-203ENST00000561838 NUP153P49790 1475 aaKnown RBP21.94■■□□□ 1.1
ITGAM-203ENST00000561838 MADDQ8WXG6 1647 aa21.93■■□□□ 1.1
ITGAM-203ENST00000561838 CFAP74Q9C0B2 1584 aa21.93■■□□□ 1.1
ITGAM-203ENST00000561838 POGZQ7Z3K3 1410 aa21.92■■□□□ 1.1
ITGAM-203ENST00000561838 ARHGEF40Q8TER5 1519 aa21.91■■□□□ 1.1
ITGAM-203ENST00000561838 FHOD3Q2V2M9 1422 aa21.91■■□□□ 1.1
ITGAM-203ENST00000561838 EEA1Q15075 1411 aa21.9■■□□□ 1.1
ITGAM-203ENST00000561838 LMTK3Q96Q04 1460 aa21.9■■□□□ 1.1
ITGAM-203ENST00000561838 AKNAQ7Z591 1439 aa21.89■■□□□ 1.1
ITGAM-203ENST00000561838 RICTORQ6R327 1708 aa21.87■■□□□ 1.09
ITGAM-203ENST00000561838 FANCAO15360 1455 aa21.87■■□□□ 1.09
ITGAM-203ENST00000561838 MAGI2Q86UL8 1455 aa21.87■■□□□ 1.09
ITGAM-203ENST00000561838 ZMYM4Q5VZL5 1548 aa21.85■■□□□ 1.09
ITGAM-203ENST00000561838 RIMS1Q86UR5 1692 aaKnown RBP21.84■■□□□ 1.09
ITGAM-203ENST00000561838 EFCAB5A4FU69 1503 aa21.83■■□□□ 1.09
ITGAM-203ENST00000561838 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.81■■□□□ 1.08
ITGAM-203ENST00000561838 ZFYVE16Q7Z3T8 1539 aa21.8■■□□□ 1.08
ITGAM-203ENST00000561838 RANGAP1P46060 587 aaPredicted RBP21.75■■□□□ 1.07
ITGAM-203ENST00000561838 TTC37Q6PGP7 1564 aa21.74■■□□□ 1.07
ITGAM-203ENST00000561838 PLCH2O75038 1416 aa21.73■■□□□ 1.07
ITGAM-203ENST00000561838 HSPA2P54652 639 aa21.72■■□□□ 1.07
ITGAM-203ENST00000561838 YEATS2Q9ULM3 1422 aa21.72■■□□□ 1.07
ITGAM-203ENST00000561838 HECW1Q76N89 1606 aa21.71■■□□□ 1.07
ITGAM-203ENST00000561838 SCAPERQ9BY12 1400 aa21.71■■□□□ 1.07
ITGAM-203ENST00000561838 CERKQ8TCT0 537 aa21.7■■□□□ 1.06
ITGAM-203ENST00000561838 FER1L4A9Z1Z3 1794 aa21.69■■□□□ 1.06
ITGAM-203ENST00000561838 EFCAB2Q5VUJ9 269 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms