RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
ZEB1-220ENST00000560909 ATMINO43313 823 aaPredicted RBP11.46□□□□□ -0.57
ZEB1-220ENST00000560909 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
ZEB1-220ENST00000560909 ST18O60284 1047 aa11.35□□□□□ -0.59
ZEB1-220ENST00000560909 MS4A3Q96HJ5 214 aa11.34□□□□□ -0.59
ZEB1-220ENST00000560909 CREBZFQ9NS37 354 aa11.33□□□□□ -0.6
ZEB1-220ENST00000560909 CCDC180Q9P1Z9 1646 aa11.32□□□□□ -0.6
ZEB1-220ENST00000560909 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
ZEB1-220ENST00000560909 ATN1P54259 1190 aaPredicted RBP11.27□□□□□ -0.61
ZEB1-220ENST00000560909 ATXN8OSP0DMR3 200 aa11.26□□□□□ -0.61
ZEB1-220ENST00000560909 SLAIN1Q8ND83 568 aa11.14□□□□□ -0.63
ZEB1-220ENST00000560909 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
ZEB1-220ENST00000560909 TMEM121BQ9BXQ6 578 aaPredicted RBP11.09□□□□□ -0.63
ZEB1-220ENST00000560909 SEC24BO95487 1268 aa11.08□□□□□ -0.64
ZEB1-220ENST00000560909 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
ZEB1-220ENST00000560909 MARVELD3Q96A59 401 aa11.05□□□□□ -0.64
ZEB1-220ENST00000560909 BMP2KQ9NSY1 1161 aaPredicted RBP11.05□□□□□ -0.64
ZEB1-220ENST00000560909 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
ZEB1-220ENST00000560909 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
ZEB1-220ENST00000560909 TRPC6Q9Y210 931 aa10.97□□□□□ -0.65
ZEB1-220ENST00000560909 KRTAP3-3Q9BYR6 98 aa10.96□□□□□ -0.65
ZEB1-220ENST00000560909 KRTAP3-2Q9BYR7 98 aa10.96□□□□□ -0.65
ZEB1-220ENST00000560909 ZBTB22O15209 634 aa10.95□□□□□ -0.66
ZEB1-220ENST00000560909 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
ZEB1-220ENST00000560909 TIE1P35590 1138 aa10.91□□□□□ -0.66
ZEB1-220ENST00000560909 SNPHO15079 494 aa10.88□□□□□ -0.67
ZEB1-220ENST00000560909 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
ZEB1-220ENST00000560909 TSPYL2Q9H2G4 693 aaPredicted RBP10.87□□□□□ -0.67
ZEB1-220ENST00000560909 CCDC61Q9Y6R9 512 aa10.85□□□□□ -0.67
ZEB1-220ENST00000560909 ABCC9O60706 1549 aa10.84□□□□□ -0.67
ZEB1-220ENST00000560909 TTLL13PA6NNM8 815 aa10.84□□□□□ -0.67
ZEB1-220ENST00000560909 EMP3P54852 163 aa10.84□□□□□ -0.67
ZEB1-220ENST00000560909 IER5LQ5T953 404 aa10.84□□□□□ -0.67
ZEB1-220ENST00000560909 ZCCHC6Q5VYS8 1495 aaKnown RBP10.81□□□□□ -0.68
ZEB1-220ENST00000560909 POTEB3A0JP26 581 aa10.81□□□□□ -0.68
ZEB1-220ENST00000560909 POTEBQ6S5H4 581 aa10.81□□□□□ -0.68
ZEB1-220ENST00000560909 HS3ST6Q96QI5 342 aa10.8□□□□□ -0.68
ZEB1-220ENST00000560909 TRIM35Q9UPQ4 493 aa10.79□□□□□ -0.68
ZEB1-220ENST00000560909 RNF166Q96A37 237 aaPredicted RBP10.77□□□□□ -0.69
ZEB1-220ENST00000560909 DCAF1Q9Y4B6 1507 aa10.76□□□□□ -0.69
ZEB1-220ENST00000560909 FAM205CA6NFA0 338 aa10.75□□□□□ -0.69
ZEB1-220ENST00000560909 MAP3K13O43283 966 aa10.75□□□□□ -0.69
ZEB1-220ENST00000560909 MYO15BQ96JP2 1530 aa10.74□□□□□ -0.69
ZEB1-220ENST00000560909 PLCG2P16885 1265 aa10.7□□□□□ -0.7
ZEB1-220ENST00000560909 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.65□□□□□ -0.7
ZEB1-220ENST00000560909 NACADO15069 1562 aa10.65□□□□□ -0.71
ZEB1-220ENST00000560909 DCAF8L2P0C7V8 631 aa10.59□□□□□ -0.71
ZEB1-220ENST00000560909 MYT1LQ9UL68 1186 aa10.59□□□□□ -0.71
ZEB1-220ENST00000560909 IRX5P78411 483 aaPredicted RBP10.57□□□□□ -0.72
ZEB1-220ENST00000560909 RB1CC1Q8TDY2 1594 aa10.56□□□□□ -0.72
ZEB1-220ENST00000560909 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
ZEB1-220ENST00000560909 TMEM106CQ9BVX2 250 aa10.47□□□□□ -0.73
ZEB1-220ENST00000560909 PCDHB13Q9Y5F0 798 aa10.47□□□□□ -0.73
ZEB1-220ENST00000560909 SGIP1Q9BQI5 828 aa10.44□□□□□ -0.74
ZEB1-220ENST00000560909 RASEFQ8IZ41 740 aa10.41□□□□□ -0.74
ZEB1-220ENST00000560909 C3orf67Q6ZVT6 689 aa10.4□□□□□ -0.74
ZEB1-220ENST00000560909 IFNL1Q8IU54 200 aa10.37□□□□□ -0.75
ZEB1-220ENST00000560909 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
ZEB1-220ENST00000560909 ERBB3P21860 1342 aa10.35□□□□□ -0.75
ZEB1-220ENST00000560909 PLA2G2EQ9NZK7 142 aa10.35□□□□□ -0.75
ZEB1-220ENST00000560909 PTGER2P43116 358 aa10.31□□□□□ -0.76
ZEB1-220ENST00000560909 SCRIBQ14160 1630 aa10.29□□□□□ -0.76
ZEB1-220ENST00000560909 BICRAQ9NZM4 1560 aa10.27□□□□□ -0.76
ZEB1-220ENST00000560909 HOXB1P14653 301 aaPredicted RBP10.27□□□□□ -0.77
ZEB1-220ENST00000560909 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
ZEB1-220ENST00000560909 UNC13AQ9UPW8 1703 aa10.24□□□□□ -0.77
ZEB1-220ENST00000560909 SHROOM4Q9ULL8 1493 aa10.23□□□□□ -0.77
ZEB1-220ENST00000560909 HOXB3P14651 431 aaPredicted RBP10.23□□□□□ -0.77
ZEB1-220ENST00000560909 L3MBTL3Q96JM7 780 aaPredicted RBP10.22□□□□□ -0.77
ZEB1-220ENST00000560909 ZNF710Q8N1W2 664 aa10.21□□□□□ -0.77
ZEB1-220ENST00000560909 PDCD7Q8N8D1 485 aaKnown RBP10.21□□□□□ -0.77
ZEB1-220ENST00000560909 ZNF687Q8N1G0 1237 aa10.16□□□□□ -0.78
ZEB1-220ENST00000560909 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
ZEB1-220ENST00000560909 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
ZEB1-220ENST00000560909 IRX2Q9BZI1 471 aaPredicted RBP10.11□□□□□ -0.79
ZEB1-220ENST00000560909 DOK7Q18PE1 504 aa10.08□□□□□ -0.8
ZEB1-220ENST00000560909 HCSTQ9UBK5 93 aa10.06□□□□□ -0.8
ZEB1-220ENST00000560909 MIER1Q8N108 512 aa10.05□□□□□ -0.8
ZEB1-220ENST00000560909 CECR2Q9BXF3 1484 aa10.03□□□□□ -0.8
ZEB1-220ENST00000560909 RIMBP2O15034 1052 aa10□□□□□ -0.81
ZEB1-220ENST00000560909 MKRN3Q13064 507 aaKnown RBP9.99□□□□□ -0.81
ZEB1-220ENST00000560909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.98□□□□□ -0.811e-11■■■■■ 28.4
ZEB1-220ENST00000560909 BAZ1AQ9NRL2 1556 aaPredicted RBP9.97□□□□□ -0.81
ZEB1-220ENST00000560909 LSM11P83369 360 aaKnown RBP eCLIP9.97□□□□□ -0.81
ZEB1-220ENST00000560909 NUBP1P53384 320 aa9.96□□□□□ -0.82
ZEB1-220ENST00000560909 GOLGA2Q08379 1002 aa9.96□□□□□ -0.82
ZEB1-220ENST00000560909 RSF1Q96T23 1441 aaPredicted RBP9.95□□□□□ -0.82
ZEB1-220ENST00000560909 EIF4G1Q04637 1599 aaKnown RBP9.95□□□□□ -0.82
ZEB1-220ENST00000560909 MROH2BQ7Z745 1585 aa9.94□□□□□ -0.82
ZEB1-220ENST00000560909 FAM212AQ96EL1 285 aa9.94□□□□□ -0.82
ZEB1-220ENST00000560909 PCDHB8Q9UN66 801 aa9.94□□□□□ -0.82
ZEB1-220ENST00000560909 SMARCA4P51532 1647 aa9.93□□□□□ -0.82
ZEB1-220ENST00000560909 RGS20O76081 388 aa9.92□□□□□ -0.82
ZEB1-220ENST00000560909 PEG3Q9GZU2 1588 aa9.9□□□□□ -0.82
ZEB1-220ENST00000560909 G3V3G9 751 aa9.89□□□□□ -0.83
ZEB1-220ENST00000560909 DCAF8Q5TAQ9 597 aa9.89□□□□□ -0.83
ZEB1-220ENST00000560909 DPY19L2Q6NUT2 758 aa9.89□□□□□ -0.83
ZEB1-220ENST00000560909 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
ZEB1-220ENST00000560909 ATAD2BQ9ULI0 1458 aa9.87□□□□□ -0.83
ZEB1-220ENST00000560909 ZSWIM6Q9HCJ5 1215 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms