RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 FHAD1B1AJZ9 1412 aa38.39■■■■□ 3.74
SHF-208ENST00000560734 THOC2Q8NI27 1593 aaKnown RBP38.39■■■■□ 3.74
SHF-208ENST00000560734 GRIN2BQ13224 1484 aa38.38■■■■□ 3.73
SHF-208ENST00000560734 TTBK1Q5TCY1 1321 aaPredicted RBP38.33■■■■□ 3.73
SHF-208ENST00000560734 ADAMTS12P58397 1594 aa38.31■■■■□ 3.72
SHF-208ENST00000560734 AQRO60306 1485 aaKnown RBP eCLIP38.3■■■■□ 3.723e-9■■■■■ 36.3
SHF-208ENST00000560734 SAMD9Q5K651 1589 aa38.22■■■■□ 3.71
SHF-208ENST00000560734 ZNF608Q9ULD9 1512 aaPredicted RBP38.18■■■■□ 3.7
SHF-208ENST00000560734 TIAM1Q13009 1591 aa38.17■■■■□ 3.7
SHF-208ENST00000560734 FMN1Q68DA7 1419 aa38.15■■■■□ 3.7
SHF-208ENST00000560734 FYCO1Q9BQS8 1478 aa38.14■■■■□ 3.7
SHF-208ENST00000560734 KANK4Q5T7N3 995 aaPredicted RBP38.13■■■■□ 3.69
SHF-208ENST00000560734 CASKIN1Q8WXD9 1431 aa38.12■■■■□ 3.69
SHF-208ENST00000560734 EIF4G3O43432 1585 aaKnown RBP38.11■■■■□ 3.69
SHF-208ENST00000560734 FHOD3Q2V2M9 1422 aa38.1■■■■□ 3.69
SHF-208ENST00000560734 PCF11O94913 1555 aaKnown RBP38.08■■■■□ 3.69
SHF-208ENST00000560734 CFAP43Q8NDM7 1665 aa38.07■■■■□ 3.68
SHF-208ENST00000560734 RRBP1Q9P2E9 1410 aaKnown RBP38.05■■■■□ 3.68
SHF-208ENST00000560734 MAGI1Q96QZ7 1491 aaPredicted RBP38.02■■■■□ 3.68
SHF-208ENST00000560734 IQGAP2Q13576 1575 aa38.01■■■■□ 3.68
SHF-208ENST00000560734 LRRC9Q6ZRR7 1453 aa38■■■■□ 3.67
SHF-208ENST00000560734 SNAPC4Q5SXM2 1469 aa37.97■■■■□ 3.67
SHF-208ENST00000560734 P3H3Q8IVL6 736 aa37.96■■■■□ 3.67
SHF-208ENST00000560734 CCER1Q8TC90 406 aaPredicted RBP37.92■■■■□ 3.66
SHF-208ENST00000560734 UGGT2Q9NYU1 1516 aa37.91■■■■□ 3.66
SHF-208ENST00000560734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.9■■■■□ 3.66
SHF-208ENST00000560734 GRIN2AQ12879 1464 aa37.9■■■■□ 3.66
SHF-208ENST00000560734 KIAA0586Q9BVV6 1533 aa37.89■■■■□ 3.66
SHF-208ENST00000560734 SYNJ2O15056 1496 aa37.84■■■■□ 3.65
SHF-208ENST00000560734 CCNB3Q8WWL7 1395 aa37.82■■■■□ 3.64
SHF-208ENST00000560734 HNRNPUL2Q1KMD3 747 aaKnown RBP37.78■■■■□ 3.64
SHF-208ENST00000560734 DNAJC5Q9H3Z4 198 aa37.7■■■■□ 3.63
SHF-208ENST00000560734 CCDC18Q5T9S5 1454 aa37.67■■■■□ 3.62
SHF-208ENST00000560734 ATP1B4Q9UN42 357 aaPredicted RBP37.64■■■■□ 3.62
SHF-208ENST00000560734 CHMP7Q8WUX9 453 aaPredicted RBP37.64■■■■□ 3.62
SHF-208ENST00000560734 NUP160Q12769 1436 aa37.64■■■■□ 3.62
SHF-208ENST00000560734 HECW1Q76N89 1606 aa37.63■■■■□ 3.61
SHF-208ENST00000560734 PHLDB1Q86UU1 1377 aa37.62■■■■□ 3.61
SHF-208ENST00000560734 KIAA0556O60303 1618 aa37.61■■■■□ 3.61
SHF-208ENST00000560734 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.61■■■■□ 3.61
SHF-208ENST00000560734 LRRIQ1Q96JM4 1722 aa37.6■■■■□ 3.61
SHF-208ENST00000560734 DISP1Q96F81 1524 aa37.6■■■■□ 3.61
SHF-208ENST00000560734 CEP170Q5SW79 1584 aa37.59■■■■□ 3.61
SHF-208ENST00000560734 EHBP1L1Q8N3D4 1523 aa37.54■■■■□ 3.6
SHF-208ENST00000560734 MTUS2Q5JR59 1369 aa37.52■■■■□ 3.6
SHF-208ENST00000560734 CLSPNQ9HAW4 1339 aa37.47■■■■□ 3.59
SHF-208ENST00000560734 EPRSP07814 1512 aaKnown RBP37.45■■■■□ 3.59
SHF-208ENST00000560734 SUPT6HQ7KZ85 1726 aaKnown RBP37.44■■■■□ 3.58
SHF-208ENST00000560734 ARHGEF11O15085 1522 aa37.4■■■■□ 3.58
SHF-208ENST00000560734 CARMIL2Q6F5E8 1435 aa37.39■■■■□ 3.58
SHF-208ENST00000560734 NCOA2Q15596 1464 aa37.38■■■■□ 3.57
SHF-208ENST00000560734 FGD6Q6ZV73 1430 aa37.37■■■■□ 3.57
SHF-208ENST00000560734 FBLN2P98095 1184 aa37.34■■■■□ 3.57
SHF-208ENST00000560734 RAPGEF6Q8TEU7 1601 aa37.33■■■■□ 3.57
SHF-208ENST00000560734 MYOM3Q5VTT5 1437 aa37.32■■■■□ 3.56
SHF-208ENST00000560734 JPH4Q96JJ6 628 aa37.31■■■■□ 3.56
SHF-208ENST00000560734 MAGI3Q5TCQ9 1506 aa37.31■■■■□ 3.56
SHF-208ENST00000560734 DHX57Q6P158 1386 aaKnown RBP37.28■■■■□ 3.56
SHF-208ENST00000560734 NUP153P49790 1475 aaKnown RBP37.25■■■■□ 3.55
SHF-208ENST00000560734 FAM50AQ14320 339 aaKnown RBP37.24■■■■□ 3.55
SHF-208ENST00000560734 SETD5Q9C0A6 1442 aa37.23■■■■□ 3.55
SHF-208ENST00000560734 CDK13Q14004 1512 aaKnown RBP37.21■■■■□ 3.55
SHF-208ENST00000560734 ITGAEP38570 1179 aa37.16■■■■□ 3.54
SHF-208ENST00000560734 RAB3GAP2Q9H2M9 1393 aa37.15■■■■□ 3.54
SHF-208ENST00000560734 TCOF1Q13428 1488 aaKnown RBP37.15■■■■□ 3.54
SHF-208ENST00000560734 MIA2Q96PC5 1412 aa37.14■■■■□ 3.54
SHF-208ENST00000560734 CDK11AQ9UQ88 783 aaPredicted RBP37.13■■■■□ 3.54
SHF-208ENST00000560734 CHD1O14646 1710 aa37.13■■■■□ 3.53
SHF-208ENST00000560734 PTPN23Q9H3S7 1636 aa37.1■■■■□ 3.53
SHF-208ENST00000560734 ABCA8O94911 1581 aa37.06■■■■□ 3.52
SHF-208ENST00000560734 SHROOM2Q13796 1616 aa37.05■■■■□ 3.52
SHF-208ENST00000560734 PLB1Q6P1J6 1458 aa37.04■■■■□ 3.52
SHF-208ENST00000560734 PRG4Q92954 1404 aaPredicted RBP36.99■■■■□ 3.51
SHF-208ENST00000560734 TROQ12816 1431 aaPredicted RBP36.99■■■■□ 3.51
SHF-208ENST00000560734 HFM1A2PYH4 1435 aa36.97■■■■□ 3.51
SHF-208ENST00000560734 ADCY10Q96PN6 1610 aa36.94■■■■□ 3.5
SHF-208ENST00000560734 PTPRKQ15262 1439 aa36.91■■■■□ 3.5
SHF-208ENST00000560734 AKNAQ7Z591 1439 aa36.9■■■■□ 3.5
SHF-208ENST00000560734 PTPRGP23470 1445 aa36.88■■■■□ 3.49
SHF-208ENST00000560734 MAPKBP1O60336 1514 aa36.84■■■■□ 3.49
SHF-208ENST00000560734 ARID3CA6NKF2 412 aa36.82■■■■□ 3.49
SHF-208ENST00000560734 CLASP1Q7Z460 1538 aa36.81■■■■□ 3.48
SHF-208ENST00000560734 ATP10BO94823 1461 aa36.81■■■■□ 3.48
SHF-208ENST00000560734 NAIPQ13075 1403 aa36.8■■■■□ 3.48
SHF-208ENST00000560734 ITSN2Q9NZM3 1697 aa36.8■■■■□ 3.48
SHF-208ENST00000560734 ACIN1Q9UKV3 1341 aaKnown RBP36.75■■■■□ 3.47
SHF-208ENST00000560734 OSCARQ8IYS5 282 aa36.75■■■■□ 3.47
SHF-208ENST00000560734 GCC2Q8IWJ2 1684 aa36.73■■■■□ 3.47
SHF-208ENST00000560734 ZNF316A6NFI3 1004 aaPredicted RBP36.73■■■■□ 3.47
SHF-208ENST00000560734 PLEKHD1A6NEE1 506 aa36.72■■■■□ 3.47
SHF-208ENST00000560734 UACAQ9BZF9 1416 aa36.71■■■■□ 3.47
SHF-208ENST00000560734 DNMT1P26358 1616 aaKnown RBP36.7■■■■□ 3.47
SHF-208ENST00000560734 ROCK1Q13464 1354 aa36.7■■■■□ 3.46
SHF-208ENST00000560734 GPATCH8Q9UKJ3 1502 aaKnown RBP36.69■■■■□ 3.46
SHF-208ENST00000560734 KIF14Q15058 1648 aa36.68■■■■□ 3.46
SHF-208ENST00000560734 TIMELESSQ9UNS1 1208 aa36.65■■■■□ 3.46
SHF-208ENST00000560734 DAPK1P53355 1430 aa36.65■■■■□ 3.46
SHF-208ENST00000560734 ABCC10Q5T3U5 1492 aa36.64■■■■□ 3.46
SHF-208ENST00000560734 ABCC5O15440 1437 aa36.59■■■■□ 3.45
SHF-208ENST00000560734 ABCC2Q92887 1545 aa36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms