RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 CCDC180Q9P1Z9 1646 aa15.53■□□□□ 0.08
LINC00520-206ENST00000560336 PHF12Q96QT6 1004 aa15.51■□□□□ 0.07
LINC00520-206ENST00000560336 FAM212AQ96EL1 285 aa15.5■□□□□ 0.07
LINC00520-206ENST00000560336 CCDC61Q9Y6R9 512 aa15.49■□□□□ 0.07
LINC00520-206ENST00000560336 GABBR2O75899 941 aa15.48■□□□□ 0.07
LINC00520-206ENST00000560336 DCAF8Q5TAQ9 597 aa15.48■□□□□ 0.07
LINC00520-206ENST00000560336 CLCN6P51797 869 aa15.39■□□□□ 0.05
LINC00520-206ENST00000560336 GSE1Q14687 1217 aa15.38■□□□□ 0.05
LINC00520-206ENST00000560336 KIF12Q96FN5 646 aa15.36■□□□□ 0.05
LINC00520-206ENST00000560336 CIZ1Q9ULV3 898 aaPredicted RBP15.36■□□□□ 0.05
LINC00520-206ENST00000560336 GALR2O43603 387 aaPredicted RBP15.34■□□□□ 0.05
LINC00520-206ENST00000560336 PYGBP11216 843 aa15.32■□□□□ 0.04
LINC00520-206ENST00000560336 MAP3K13O43283 966 aa15.31■□□□□ 0.04
LINC00520-206ENST00000560336 MS4A3Q96HJ5 214 aa15.31■□□□□ 0.04
LINC00520-206ENST00000560336 PCDHB13Q9Y5F0 798 aa15.24■□□□□ 0.03
LINC00520-206ENST00000560336 SGIP1Q9BQI5 828 aa15.21■□□□□ 0.03
LINC00520-206ENST00000560336 CHRM1P11229 460 aaPredicted RBP15.19■□□□□ 0.02
LINC00520-206ENST00000560336 IFNL1Q8IU54 200 aa15.18■□□□□ 0.02
LINC00520-206ENST00000560336 DCBLD2Q96PD2 775 aa15.18■□□□□ 0.02
LINC00520-206ENST00000560336 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
LINC00520-206ENST00000560336 TRPC6Q9Y210 931 aa15.16■□□□□ 0.02
LINC00520-206ENST00000560336 TRIM41Q8WV44 630 aa15.13■□□□□ 0.01
LINC00520-206ENST00000560336 PCDHB8Q9UN66 801 aa15.13■□□□□ 0.01
LINC00520-206ENST00000560336 PKD2Q13563 968 aa15.08■□□□□ 0
LINC00520-206ENST00000560336 ZNF467Q7Z7K2 595 aaPredicted RBP15.07■□□□□ 0
LINC00520-206ENST00000560336 BMP2KQ9NSY1 1161 aaPredicted RBP15.06■□□□□ 0
LINC00520-206ENST00000560336 TIE1P35590 1138 aa15.05■□□□□ -0
LINC00520-206ENST00000560336 ATMINO43313 823 aaPredicted RBP15.04■□□□□ -0
LINC00520-206ENST00000560336 ASTLQ6HA08 431 aaPredicted RBP15.04■□□□□ -0
LINC00520-206ENST00000560336 ECM2O94769 699 aaPredicted RBP15.03■□□□□ -0
LINC00520-206ENST00000560336 TTLL13PA6NNM8 815 aa15□□□□□ -0.01
LINC00520-206ENST00000560336 ATN1P54259 1190 aaPredicted RBP15□□□□□ -0.01
LINC00520-206ENST00000560336 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
LINC00520-206ENST00000560336 TMEM106CQ9BVX2 250 aa14.99□□□□□ -0.01
LINC00520-206ENST00000560336 RNF25Q96BH1 459 aaPredicted RBP14.98□□□□□ -0.01
LINC00520-206ENST00000560336 PSEN1P49768 467 aa14.94□□□□□ -0.02
LINC00520-206ENST00000560336 RIOK3O14730 519 aaKnown RBP14.93□□□□□ -0.02
LINC00520-206ENST00000560336 PDAP1Q13442 181 aaKnown RBP14.93□□□□□ -0.02
LINC00520-206ENST00000560336 TRIM35Q9UPQ4 493 aa14.91□□□□□ -0.02
LINC00520-206ENST00000560336 RGL2O15211 777 aa14.9□□□□□ -0.02
LINC00520-206ENST00000560336 SLC39A7Q92504 469 aa14.86□□□□□ -0.03
LINC00520-206ENST00000560336 VGFO15240 615 aaPredicted RBP14.84□□□□□ -0.03
LINC00520-206ENST00000560336 METRNQ9UJH8 293 aa14.84□□□□□ -0.03
LINC00520-206ENST00000560336 C7P10643 843 aa14.83□□□□□ -0.04
LINC00520-206ENST00000560336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.81□□□□□ -0.04
LINC00520-206ENST00000560336 ZFP91Q96JP5 570 aaPredicted RBP14.81□□□□□ -0.04
LINC00520-206ENST00000560336 TAOK2Q9UL54 1235 aa14.78□□□□□ -0.04
LINC00520-206ENST00000560336 ZCCHC6Q5VYS8 1495 aaKnown RBP14.77□□□□□ -0.04
LINC00520-206ENST00000560336 GOLGA2Q08379 1002 aa14.77□□□□□ -0.05
LINC00520-206ENST00000560336 IER5LQ5T953 404 aa14.77□□□□□ -0.05
LINC00520-206ENST00000560336 CABP2Q9NPB3 220 aa14.77□□□□□ -0.05
LINC00520-206ENST00000560336 AMER1Q5JTC6 1135 aaPredicted RBP14.76□□□□□ -0.05
LINC00520-206ENST00000560336 RTN4Q9NQC3 1192 aaKnown RBP14.74□□□□□ -0.05
LINC00520-206ENST00000560336 POTEFA5A3E0 1075 aa14.72□□□□□ -0.05
LINC00520-206ENST00000560336 SEC24BO95487 1268 aa14.72□□□□□ -0.05
LINC00520-206ENST00000560336 MKRN3Q13064 507 aaKnown RBP14.72□□□□□ -0.05
LINC00520-206ENST00000560336 COLQQ9Y215 455 aaPredicted RBP14.72□□□□□ -0.05
LINC00520-206ENST00000560336 LHX8Q68G74 356 aa14.71□□□□□ -0.05
LINC00520-206ENST00000560336 BCL11BQ9C0K0 894 aaPredicted RBP14.7□□□□□ -0.06
LINC00520-206ENST00000560336 POTEB2H3BUK9 544 aa14.69□□□□□ -0.06
LINC00520-206ENST00000560336 STK25O00506 426 aa14.69□□□□□ -0.06
LINC00520-206ENST00000560336 IRX5P78411 483 aaPredicted RBP14.68□□□□□ -0.06
LINC00520-206ENST00000560336 STK24Q9Y6E0 443 aa14.68□□□□□ -0.06
LINC00520-206ENST00000560336 EFCAB3Q8N7B9 438 aa14.66□□□□□ -0.06
LINC00520-206ENST00000560336 PLCG2P16885 1265 aa14.65□□□□□ -0.06
LINC00520-206ENST00000560336 OCEL1Q9H607 264 aa14.64□□□□□ -0.07
LINC00520-206ENST00000560336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.62□□□□□ -0.07
LINC00520-206ENST00000560336 DCAF8L2P0C7V8 631 aa14.6□□□□□ -0.07
LINC00520-206ENST00000560336 POTEJP0CG39 1038 aa14.58□□□□□ -0.08
LINC00520-206ENST00000560336 CHGAP10645 457 aaKnown RBP14.58□□□□□ -0.08
LINC00520-206ENST00000560336 ABCC9O60706 1549 aa14.57□□□□□ -0.08
LINC00520-206ENST00000560336 PDCD7Q8N8D1 485 aaKnown RBP14.57□□□□□ -0.08
LINC00520-206ENST00000560336 HS6ST3Q8IZP7 471 aa14.56□□□□□ -0.08
LINC00520-206ENST00000560336 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
LINC00520-206ENST00000560336 ILDR1Q86SU0 546 aaPredicted RBP14.55□□□□□ -0.08
LINC00520-206ENST00000560336 SOX12O15370 315 aa14.54□□□□□ -0.08
LINC00520-206ENST00000560336 DPY19L2Q6NUT2 758 aa14.51□□□□□ -0.09
LINC00520-206ENST00000560336 PHF8Q9UPP1 1060 aa14.51□□□□□ -0.09
LINC00520-206ENST00000560336 OTUD5Q96G74 571 aa14.48□□□□□ -0.09
LINC00520-206ENST00000560336 MFRPQ9BY79 579 aa14.47□□□□□ -0.09
LINC00520-206ENST00000560336 NLRP6P59044 892 aa14.45□□□□□ -0.1
LINC00520-206ENST00000560336 MAMSTRQ6ZN01 415 aa14.45□□□□□ -0.1
LINC00520-206ENST00000560336 MS4A4AQ96JQ5 239 aa14.45□□□□□ -0.1
LINC00520-206ENST00000560336 FBXO22Q8NEZ5 403 aa14.43□□□□□ -0.1
LINC00520-206ENST00000560336 L3MBTL3Q96JM7 780 aaPredicted RBP14.42□□□□□ -0.1
LINC00520-206ENST00000560336 SCUBE2Q9NQ36 999 aa14.42□□□□□ -0.1
LINC00520-206ENST00000560336 DNAJC5Q9H3Z4 198 aa14.39□□□□□ -0.11
LINC00520-206ENST00000560336 NKX1-1Q15270 411 aaPredicted RBP14.38□□□□□ -0.11
LINC00520-206ENST00000560336 MYO15BQ96JP2 1530 aa14.37□□□□□ -0.11
LINC00520-206ENST00000560336 BOLA1Q9Y3E2 137 aa14.37□□□□□ -0.11
LINC00520-206ENST00000560336 NACADO15069 1562 aa14.36□□□□□ -0.11
LINC00520-206ENST00000560336 G3V3G9 751 aa14.35□□□□□ -0.11
LINC00520-206ENST00000560336 SHROOM4Q9ULL8 1493 aa14.34□□□□□ -0.11
LINC00520-206ENST00000560336 C3orf67Q6ZVT6 689 aa14.31□□□□□ -0.12
LINC00520-206ENST00000560336 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.31□□□□□ -0.12
LINC00520-206ENST00000560336 MICALL2Q8IY33 904 aa14.29□□□□□ -0.12
LINC00520-206ENST00000560336 TMEM121BQ9BXQ6 578 aaPredicted RBP14.29□□□□□ -0.12
LINC00520-206ENST00000560336 RB1CC1Q8TDY2 1594 aa14.29□□□□□ -0.12
LINC00520-206ENST00000560336 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
LINC00520-206ENST00000560336 PPP1R37O75864 691 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms